RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 TELO2Q9Y4R8 837 aa3.37□□□□□ -1.87
CHD9-209ENST00000564255 KLHL33A6NCF5 533 aa3.37□□□□□ -1.87
CHD9-209ENST00000564255 NOTOA8MTQ0 251 aa3.37□□□□□ -1.87
CHD9-209ENST00000564255 ERC2O15083 957 aa3.37□□□□□ -1.87
CHD9-209ENST00000564255 MTNR1BP49286 362 aa3.37□□□□□ -1.87
CHD9-209ENST00000564255 SCAND1P57086 179 aa3.37□□□□□ -1.87
CHD9-209ENST00000564255 KCNMA1Q12791 1236 aa3.37□□□□□ -1.87
CHD9-209ENST00000564255 BIRC2Q13490 618 aa3.37□□□□□ -1.87
CHD9-209ENST00000564255 RRP12Q5JTH9 1297 aaKnown RBP3.37□□□□□ -1.87
CHD9-209ENST00000564255 KCTD1Q719H9 257 aa3.37□□□□□ -1.87
CHD9-209ENST00000564255 LZTR1Q8N653 840 aa3.37□□□□□ -1.87
CHD9-209ENST00000564255 CLIP3Q96DZ5 547 aa3.37□□□□□ -1.87
CHD9-209ENST00000564255 TEKT5Q96M29 485 aa3.37□□□□□ -1.87
CHD9-209ENST00000564255 PCIF1Q9H4Z3 704 aa3.37□□□□□ -1.87
CHD9-209ENST00000564255 CARS2Q9HA77 564 aaKnown RBP3.37□□□□□ -1.87
CHD9-209ENST00000564255 SP110Q9HB58 689 aa3.37□□□□□ -1.87
CHD9-209ENST00000564255 ANLNQ9NQW6 1124 aa3.37□□□□□ -1.87
CHD9-209ENST00000564255 ZNF277Q9NRM2 450 aaPredicted RBP3.37□□□□□ -1.87
CHD9-209ENST00000564255 NUB1Q9Y5A7 615 aa3.37□□□□□ -1.87
CHD9-209ENST00000564255 VSTM5A8MXK1 200 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 SLC27A2O14975 620 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 BUB1BO60566 1050 aaPredicted RBP3.36□□□□□ -1.87
CHD9-209ENST00000564255 H2AFYO75367 372 aaKnown RBP3.36□□□□□ -1.87
CHD9-209ENST00000564255 MSL3P1P0C860 447 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 GLI4P10075 376 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 PTX3P26022 381 aaPredicted RBP3.36□□□□□ -1.87
CHD9-209ENST00000564255 GJA4P35212 333 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 GALEQ14376 348 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 RSPO4Q2I0M5 234 aaPredicted RBP3.36□□□□□ -1.87
CHD9-209ENST00000564255 NKAPLQ5M9Q1 402 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 CATSPEREQ5SY80 951 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 SYCP2LQ5T4T6 812 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 CPZQ66K79 652 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 CXorf67Q86X51 503 aaPredicted RBP3.36□□□□□ -1.87
CHD9-209ENST00000564255 PHOSPHO1Q8TCT1 267 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 JADE3Q92613 823 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 SARGQ9BW04 601 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 CD244Q9BZW8 370 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 USP36Q9P275 1121 aaKnown RBP3.36□□□□□ -1.87
CHD9-209ENST00000564255 ASH2LQ9UBL3 628 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 LCHNA4D1U4 455 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 FAM90A27PA6NNH2 459 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 KRIT1O00522 736 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 KDM1AO60341 852 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 HSPA6P17066 643 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 HOXA10P31260 410 aaPredicted RBP3.36□□□□□ -1.87
CHD9-209ENST00000564255 IKZF1Q13422 519 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 MSMPQ1L6U9 139 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 EFCAB2Q5VUJ9 269 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 KSR2Q6VAB6 950 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 KCNK18Q7Z418 384 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 AMOTL1Q8IY63 956 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 NETO2Q8NC67 525 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 TTLL11Q8NHH1 800 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 SEC14L1Q92503 715 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 SYTL4Q96C24 671 aaPredicted RBP3.36□□□□□ -1.87
CHD9-209ENST00000564255 PDLIM7Q9NR12 457 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 IMPACTQ9P2X3 320 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 MRFAP1Q9Y605 127 aa3.36□□□□□ -1.87
CHD9-209ENST00000564255 USP2O75604 605 aaPredicted RBP3.35□□□□□ -1.87
CHD9-209ENST00000564255 IL33O95760 270 aa3.35□□□□□ -1.87
CHD9-209ENST00000564255 ASGR2P07307 311 aa3.35□□□□□ -1.87
CHD9-209ENST00000564255 CT47B1P0C2W7 299 aaPredicted RBP3.35□□□□□ -1.87
CHD9-209ENST00000564255 AGXTP21549 392 aa3.35□□□□□ -1.87
CHD9-209ENST00000564255 RTP1P59025 263 aa3.35□□□□□ -1.87
CHD9-209ENST00000564255 RASSF7Q02833 373 aa3.35□□□□□ -1.87
CHD9-209ENST00000564255 NR0B2Q15466 257 aa3.35□□□□□ -1.87
CHD9-209ENST00000564255 VPS72Q15906 364 aa3.35□□□□□ -1.87
CHD9-209ENST00000564255 BTBD8Q5XKL5 378 aa3.35□□□□□ -1.87
CHD9-209ENST00000564255 STEAP3Q658P3 488 aa3.35□□□□□ -1.87
CHD9-209ENST00000564255 STK11IPQ8N1F8 1099 aa3.35□□□□□ -1.87
CHD9-209ENST00000564255 SLC12A5Q9H2X9 1139 aa3.35□□□□□ -1.87
CHD9-209ENST00000564255 ADAMTS10Q9H324 1103 aa3.35□□□□□ -1.87
CHD9-209ENST00000564255 COMMD10Q9Y6G5 202 aa3.35□□□□□ -1.87
CHD9-209ENST00000564255 ANO9A1A5B4 782 aa3.35□□□□□ -1.87
CHD9-209ENST00000564255 RASSF10A6NK89 507 aa3.35□□□□□ -1.87
CHD9-209ENST00000564255 FOXP2O15409 715 aa3.35□□□□□ -1.87
CHD9-209ENST00000564255 PRNPP04156 253 aa3.35□□□□□ -1.87
CHD9-209ENST00000564255 NTRK1P04629 796 aa3.35□□□□□ -1.87
CHD9-209ENST00000564255 ENPP1P22413 925 aa3.35□□□□□ -1.87
CHD9-209ENST00000564255 MANFP55145 182 aaKnown RBP3.35□□□□□ -1.87
CHD9-209ENST00000564255 ADKP55263 362 aaKnown RBP3.35□□□□□ -1.87
CHD9-209ENST00000564255 MRPS9P82933 396 aaKnown RBP3.35□□□□□ -1.87
CHD9-209ENST00000564255 CHRNEQ04844 493 aa3.35□□□□□ -1.87
CHD9-209ENST00000564255 FSCN1Q16658 493 aaKnown RBP3.35□□□□□ -1.87
CHD9-209ENST00000564255 RALGPS1Q5JS13 557 aa3.35□□□□□ -1.87
CHD9-209ENST00000564255 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.35□□□□□ -1.87
CHD9-209ENST00000564255 NME9Q86XW9 330 aa3.35□□□□□ -1.87
CHD9-209ENST00000564255 SPPL2CQ8IUH8 684 aa3.35□□□□□ -1.87
CHD9-209ENST00000564255 USP33Q8TEY7 942 aa3.35□□□□□ -1.87
CHD9-209ENST00000564255 BCL7CQ8WUZ0 217 aaPredicted RBP3.35□□□□□ -1.87
CHD9-209ENST00000564255 RTF1Q92541 710 aaKnown RBP3.35□□□□□ -1.87
CHD9-209ENST00000564255 FOXRED1Q96CU9 486 aaPredicted RBP3.35□□□□□ -1.87
CHD9-209ENST00000564255 DDX21Q9NR30 783 aaKnown RBP eCLIP3.35□□□□□ -1.87
CHD9-209ENST00000564255 INVSQ9Y283 1065 aa3.35□□□□□ -1.87
CHD9-209ENST00000564255 GPR45Q9Y5Y3 372 aa3.35□□□□□ -1.87
CHD9-209ENST00000564255 HGSO14964 777 aaPredicted RBP3.34□□□□□ -1.87
CHD9-209ENST00000564255 MAFKO60675 156 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 GDF11O95390 407 aa3.34□□□□□ -1.87
CHD9-209ENST00000564255 PHKG2P15735 406 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms