RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 NACC1Q96RE7 527 aa14.33□□□□□ -0.12
CLK3-214ENST00000564096 PLIN2Q99541 437 aa14.33□□□□□ -0.12
CLK3-214ENST00000564096 HSD17B14Q9BPX1 270 aa14.33□□□□□ -0.12
CLK3-214ENST00000564096 AZI2Q9H6S1 392 aa14.33□□□□□ -0.12
CLK3-214ENST00000564096 PDGFCQ9NRA1 345 aa14.33□□□□□ -0.12
CLK3-214ENST00000564096 WBP1LQ9NX94 342 aa14.33□□□□□ -0.12
CLK3-214ENST00000564096 FAM184BQ9ULE4 1060 aa14.33□□□□□ -0.12
CLK3-214ENST00000564096 GABRQQ9UN88 632 aa14.33□□□□□ -0.12
CLK3-214ENST00000564096 IGSF9BQ9UPX0 1349 aa14.33□□□□□ -0.12
CLK3-214ENST00000564096 LYPLA2O95372 231 aa14.32□□□□□ -0.12
CLK3-214ENST00000564096 SPATA31C1P0DKV0 1188 aa14.32□□□□□ -0.12
CLK3-214ENST00000564096 SP2Q02086 613 aa14.32□□□□□ -0.12
CLK3-214ENST00000564096 TNFAIP2Q03169 654 aa14.32□□□□□ -0.12
CLK3-214ENST00000564096 CTTNQ14247 550 aaKnown RBP14.32□□□□□ -0.12
CLK3-214ENST00000564096 CCDC144BQ3MJ40 725 aa14.32□□□□□ -0.12
CLK3-214ENST00000564096 NAALADL2Q58DX5 795 aa14.32□□□□□ -0.12
CLK3-214ENST00000564096 BRDTQ58F21 947 aaPredicted RBP14.32□□□□□ -0.12
CLK3-214ENST00000564096 OR6J1Q8NGC5 347 aa14.32□□□□□ -0.12
CLK3-214ENST00000564096 PPTC7Q8NI37 304 aa14.32□□□□□ -0.12
CLK3-214ENST00000564096 PXYLP1Q8TE99 480 aa14.32□□□□□ -0.12
CLK3-214ENST00000564096 SEPT1Q8WYJ6 367 aa14.32□□□□□ -0.12
CLK3-214ENST00000564096 CCDC47Q96A33 483 aaKnown RBP14.32□□□□□ -0.12
CLK3-214ENST00000564096 FAM167AQ96KS9 214 aa14.32□□□□□ -0.12
CLK3-214ENST00000564096 GZF1Q9H116 711 aaPredicted RBP14.32□□□□□ -0.12
CLK3-214ENST00000564096 ZNF302Q9NR11 478 aa14.32□□□□□ -0.12
CLK3-214ENST00000564096 KIAA1217Q5T5P2 1943 aa14.32□□□□□ -0.12
CLK3-214ENST00000564096 EMSYQ7Z589 1322 aa14.32□□□□□ -0.12
CLK3-214ENST00000564096 ZSWIM8A7E2V4 1837 aa14.31□□□□□ -0.12
CLK3-214ENST00000564096 ZNFX1Q9P2E3 1918 aaKnown RBP14.31□□□□□ -0.12
CLK3-214ENST00000564096 GTPBP6O43824 516 aaPredicted RBP14.31□□□□□ -0.12
CLK3-214ENST00000564096 ADCY3O60266 1144 aa14.31□□□□□ -0.12
CLK3-214ENST00000564096 SORBS3O60504 671 aa14.31□□□□□ -0.12
CLK3-214ENST00000564096 SLITRK3O94933 977 aa14.31□□□□□ -0.12
CLK3-214ENST00000564096 EYA4O95677 639 aa14.31□□□□□ -0.12
CLK3-214ENST00000564096 IGHA2P01877 340 aa14.31□□□□□ -0.12
CLK3-214ENST00000564096 SSBP05455 408 aaKnown RBP eCLIP14.31□□□□□ -0.12
CLK3-214ENST00000564096 ZNF865P0CJ78 1059 aaPredicted RBP14.31□□□□□ -0.12
CLK3-214ENST00000564096 CYBAP13498 195 aa14.31□□□□□ -0.12
CLK3-214ENST00000564096 ARHGAP1Q07960 439 aa14.31□□□□□ -0.12
CLK3-214ENST00000564096 ABHD15Q6UXT9 468 aa14.31□□□□□ -0.12
CLK3-214ENST00000564096 RBM43Q6ZSC3 357 aaKnown RBP14.31□□□□□ -0.12
CLK3-214ENST00000564096 TLK2Q86UE8 772 aa14.31□□□□□ -0.12
CLK3-214ENST00000564096 C4orf19Q8IY42 314 aa14.31□□□□□ -0.12
CLK3-214ENST00000564096 SMARCE1Q969G3 411 aa14.31□□□□□ -0.12
CLK3-214ENST00000564096 PAGE5Q96GU1 130 aa14.31□□□□□ -0.12
CLK3-214ENST00000564096 GPR20Q99678 358 aa14.31□□□□□ -0.12
CLK3-214ENST00000564096 BMP2KQ9NSY1 1161 aaPredicted RBP14.31□□□□□ -0.12
CLK3-214ENST00000564096 KBTBD4Q9NVX7 518 aa14.31□□□□□ -0.12
CLK3-214ENST00000564096 RMND1Q9NWS8 449 aa14.31□□□□□ -0.12
CLK3-214ENST00000564096 RGL1Q9NZL6 768 aa14.31□□□□□ -0.12
CLK3-214ENST00000564096 GABBR1Q9UBS5 961 aa14.31□□□□□ -0.12
CLK3-214ENST00000564096 TRIM17Q9Y577 477 aa14.31□□□□□ -0.12
CLK3-214ENST00000564096 SYCE3A1L190 88 aa14.3□□□□□ -0.12
CLK3-214ENST00000564096 ARHGEF35A5YM69 484 aa14.3□□□□□ -0.12
CLK3-214ENST00000564096 ATG7O95352 703 aa14.3□□□□□ -0.12
CLK3-214ENST00000564096 KRT18P05783 430 aaKnown RBP14.3□□□□□ -0.12
CLK3-214ENST00000564096 PLA2G4BP0C869 781 aa14.3□□□□□ -0.12
CLK3-214ENST00000564096 SMPD1P17405 629 aa14.3□□□□□ -0.12
CLK3-214ENST00000564096 TCF7P36402 384 aaPredicted RBP14.3□□□□□ -0.12
CLK3-214ENST00000564096 AFMP43652 599 aa14.3□□□□□ -0.12
CLK3-214ENST00000564096 SLC26A2P50443 739 aa14.3□□□□□ -0.12
CLK3-214ENST00000564096 PRKCEQ02156 737 aa14.3□□□□□ -0.12
CLK3-214ENST00000564096 COL13A1Q5TAT6 717 aaPredicted RBP14.3□□□□□ -0.12
CLK3-214ENST00000564096 SASS6Q6UVJ0 657 aa14.3□□□□□ -0.12
CLK3-214ENST00000564096 OTUD6AQ7L8S5 288 aa14.3□□□□□ -0.12
CLK3-214ENST00000564096 CCDC60Q8IWA6 550 aaPredicted RBP14.3□□□□□ -0.12
CLK3-214ENST00000564096 CKAP2LQ8IYA6 745 aa14.3□□□□□ -0.12
CLK3-214ENST00000564096 AFAP1L1Q8TED9 768 aa14.3□□□□□ -0.12
CLK3-214ENST00000564096 AP5M1Q9H0R1 490 aa14.3□□□□□ -0.12
CLK3-214ENST00000564096 SPC25Q9HBM1 224 aa14.3□□□□□ -0.12
CLK3-214ENST00000564096 BLOC1S4Q9NUP1 217 aa14.3□□□□□ -0.12
CLK3-214ENST00000564096 KCND2Q9NZV8 630 aa14.3□□□□□ -0.12
CLK3-214ENST00000564096 TSKSQ9UJT2 592 aa14.3□□□□□ -0.12
CLK3-214ENST00000564096 ZNF215Q9UL58 517 aaPredicted RBP14.3□□□□□ -0.12
CLK3-214ENST00000564096 Q9Y3F1 56 aa14.3□□□□□ -0.12
CLK3-214ENST00000564096 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.29□□□□□ -0.12
CLK3-214ENST00000564096 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.29□□□□□ -0.12
CLK3-214ENST00000564096 E9PMD0 336 aa14.29□□□□□ -0.12
CLK3-214ENST00000564096 SEPT4O43236 478 aa14.29□□□□□ -0.12
CLK3-214ENST00000564096 CAPN15O75808 1086 aa14.29□□□□□ -0.12
CLK3-214ENST00000564096 CCDC192P0DO97 292 aa14.29□□□□□ -0.12
CLK3-214ENST00000564096 XRCC6P12956 609 aaKnown RBP eCLIP14.29□□□□□ -0.12
CLK3-214ENST00000564096 PRKAR2AP13861 404 aaKnown RBP14.29□□□□□ -0.12
CLK3-214ENST00000564096 YWHABP31946 246 aaKnown RBP14.29□□□□□ -0.12
CLK3-214ENST00000564096 CPT1AP50416 773 aa14.29□□□□□ -0.12
CLK3-214ENST00000564096 ASIC1P78348 528 aa14.29□□□□□ -0.12
CLK3-214ENST00000564096 PNOCQ13519 176 aa14.29□□□□□ -0.12
CLK3-214ENST00000564096 MCM6Q14566 821 aa14.29□□□□□ -0.12
CLK3-214ENST00000564096 ECM1Q16610 540 aa14.29□□□□□ -0.12
CLK3-214ENST00000564096 SWSAP1Q6NVH7 229 aa14.29□□□□□ -0.12
CLK3-214ENST00000564096 SH3RF1Q7Z6J0 888 aa14.29□□□□□ -0.12
CLK3-214ENST00000564096 GPBP1Q86WP2 473 aa14.29□□□□□ -0.12
CLK3-214ENST00000564096 GLG1Q92896 1179 aa14.29□□□□□ -0.12
CLK3-214ENST00000564096 COPS5Q92905 334 aa14.29□□□□□ -0.12
CLK3-214ENST00000564096 GTPBP4Q9BZE4 634 aaKnown RBP14.29□□□□□ -0.12
CLK3-214ENST00000564096 BHMT2Q9H2M3 363 aa14.29□□□□□ -0.12
CLK3-214ENST00000564096 ANKEF1Q9NU02 776 aa14.29□□□□□ -0.12
CLK3-214ENST00000564096 KIAA1468Q9P260 1216 aa14.29□□□□□ -0.12
CLK3-214ENST00000564096 DBR1Q9UK59 544 aaKnown RBP14.29□□□□□ -0.12
CLK3-214ENST00000564096 PPME1Q9Y570 386 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms