RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 EPC2Q52LR7 807 aa10.89□□□□□ -0.67
CLN6-203ENST00000563917 FAM160B1Q5W0V3 765 aa10.89□□□□□ -0.67
CLN6-203ENST00000563917 PLPPR4Q7Z2D5 763 aa10.89□□□□□ -0.67
CLN6-203ENST00000563917 TMEM192Q8IY95 271 aa10.89□□□□□ -0.67
CLN6-203ENST00000563917 SP7Q8TDD2 431 aaPredicted RBP10.89□□□□□ -0.67
CLN6-203ENST00000563917 MRPL38Q96DV4 380 aaKnown RBP10.89□□□□□ -0.67
CLN6-203ENST00000563917 TCEANC2Q96MN5 208 aa10.89□□□□□ -0.67
CLN6-203ENST00000563917 FTHL17Q9BXU8 183 aa10.89□□□□□ -0.67
CLN6-203ENST00000563917 C6orf50Q9HD87 102 aa10.89□□□□□ -0.67
CLN6-203ENST00000563917 RNF216Q9NWF9 866 aaPredicted RBP10.89□□□□□ -0.67
CLN6-203ENST00000563917 BARHL2Q9NY43 387 aa10.89□□□□□ -0.67
CLN6-203ENST00000563917 FAM50BQ9Y247 325 aa10.89□□□□□ -0.67
CLN6-203ENST00000563917 CHD9Q3L8U1 2897 aa10.89□□□□□ -0.67
CLN6-203ENST00000563917 MICAL3Q7RTP6 2002 aa10.89□□□□□ -0.67
CLN6-203ENST00000563917 PTPRSQ13332 1948 aa10.88□□□□□ -0.67
CLN6-203ENST00000563917 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.88□□□□□ -0.67
CLN6-203ENST00000563917 STXBP3O00186 592 aa10.88□□□□□ -0.67
CLN6-203ENST00000563917 REC8O95072 547 aa10.88□□□□□ -0.67
CLN6-203ENST00000563917 CHRNA1P02708 482 aa10.88□□□□□ -0.67
CLN6-203ENST00000563917 RB1P06400 928 aa10.88□□□□□ -0.67
CLN6-203ENST00000563917 PSMA5P28066 241 aa10.88□□□□□ -0.67
CLN6-203ENST00000563917 GNA11P29992 359 aa10.88□□□□□ -0.67
CLN6-203ENST00000563917 CTNNB1P35222 781 aa10.88□□□□□ -0.67
CLN6-203ENST00000563917 ACTR2P61160 394 aa10.88□□□□□ -0.67
CLN6-203ENST00000563917 MRPS6P82932 125 aaKnown RBP10.88□□□□□ -0.67
CLN6-203ENST00000563917 ODR4Q5SWX8 454 aa10.88□□□□□ -0.67
CLN6-203ENST00000563917 BLOC1S2Q6QNY1 142 aa10.88□□□□□ -0.67
CLN6-203ENST00000563917 RUFY4Q6ZNE9 571 aa10.88□□□□□ -0.67
CLN6-203ENST00000563917 TSHZ1Q6ZSZ6 1077 aa10.88□□□□□ -0.67
CLN6-203ENST00000563917 EP400NLQ6ZTU2 488 aa10.88□□□□□ -0.67
CLN6-203ENST00000563917 SPRED2Q7Z698 418 aa10.88□□□□□ -0.67
CLN6-203ENST00000563917 CKAP2LQ8IYA6 745 aa10.88□□□□□ -0.67
CLN6-203ENST00000563917 BICD2Q8TD16 824 aa10.88□□□□□ -0.67
CLN6-203ENST00000563917 CCDC136Q96JN2 1154 aa10.88□□□□□ -0.67
CLN6-203ENST00000563917 UBE2ZQ9H832 354 aaPredicted RBP10.88□□□□□ -0.67
CLN6-203ENST00000563917 BRPF3Q9ULD4 1205 aa10.88□□□□□ -0.67
CLN6-203ENST00000563917 CDY2AQ9Y6F7 541 aa10.88□□□□□ -0.67
CLN6-203ENST00000563917 SQORQ9Y6N5 450 aa10.88□□□□□ -0.67
CLN6-203ENST00000563917 PRUNE2Q8WUY3 3088 aa10.88□□□□□ -0.67
CLN6-203ENST00000563917 EYSQ5T1H1 3165 aa10.87□□□□□ -0.67
CLN6-203ENST00000563917 TCF20Q9UGU0 1960 aaKnown RBP10.87□□□□□ -0.67
CLN6-203ENST00000563917 SIP14410 1827 aa10.87□□□□□ -0.67
CLN6-203ENST00000563917 POTEB3A0JP26 581 aa10.87□□□□□ -0.67
CLN6-203ENST00000563917 MBLAC1A4D2B0 266 aaPredicted RBP10.87□□□□□ -0.67
CLN6-203ENST00000563917 H3BNC9 293 aa10.87□□□□□ -0.67
CLN6-203ENST00000563917 MEIS1O00470 390 aa10.87□□□□□ -0.67
CLN6-203ENST00000563917 STAG3L1P0CL83 205 aa10.87□□□□□ -0.67
CLN6-203ENST00000563917 ARP10275 920 aa10.87□□□□□ -0.67
CLN6-203ENST00000563917 SCG2P13521 617 aa10.87□□□□□ -0.67
CLN6-203ENST00000563917 KCNA5P22460 613 aa10.87□□□□□ -0.67
CLN6-203ENST00000563917 SREBF1P36956 1147 aa10.87□□□□□ -0.67
CLN6-203ENST00000563917 BTG3Q14201 252 aaPredicted RBP10.87□□□□□ -0.67
CLN6-203ENST00000563917 LPIN1Q14693 890 aa10.87□□□□□ -0.67
CLN6-203ENST00000563917 PUS10Q3MIT2 529 aaKnown RBP10.87□□□□□ -0.67
CLN6-203ENST00000563917 ADCK5Q3MIX3 580 aa10.87□□□□□ -0.67
CLN6-203ENST00000563917 FBXO47Q5MNV8 452 aa10.87□□□□□ -0.67
CLN6-203ENST00000563917 JAKMIP3Q5VZ66 844 aa10.87□□□□□ -0.67
CLN6-203ENST00000563917 MIS18BP1Q6P0N0 1132 aa10.87□□□□□ -0.67
CLN6-203ENST00000563917 POTEBQ6S5H4 581 aa10.87□□□□□ -0.67
CLN6-203ENST00000563917 FAM43BQ6ZT52 329 aaPredicted RBP10.87□□□□□ -0.67
CLN6-203ENST00000563917 NIPA1Q7RTP0 329 aa10.87□□□□□ -0.67
CLN6-203ENST00000563917 PLA2G4DQ86XP0 818 aa10.87□□□□□ -0.67
CLN6-203ENST00000563917 NME8Q8N427 588 aa10.87□□□□□ -0.67
CLN6-203ENST00000563917 BANK1Q8NDB2 785 aa10.87□□□□□ -0.67
CLN6-203ENST00000563917 PPP2R3CQ969Q6 453 aa10.87□□□□□ -0.67
CLN6-203ENST00000563917 PGBD1Q96JS3 809 aa10.87□□□□□ -0.67
CLN6-203ENST00000563917 JAKMIP1Q96N16 626 aaKnown RBP10.87□□□□□ -0.67
CLN6-203ENST00000563917 NECAB3Q96P71 396 aaPredicted RBP10.87□□□□□ -0.67
CLN6-203ENST00000563917 C11orf84Q9BUA3 381 aaPredicted RBP10.87□□□□□ -0.67
CLN6-203ENST00000563917 AGO4Q9HCK5 861 aaKnown RBP10.87□□□□□ -0.67
CLN6-203ENST00000563917 LRFN2Q9ULH4 789 aa10.87□□□□□ -0.67
CLN6-203ENST00000563917 TELO2Q9Y4R8 837 aa10.87□□□□□ -0.67
CLN6-203ENST00000563917 PCDHA2Q9Y5H9 948 aa10.87□□□□□ -0.67
CLN6-203ENST00000563917 TRPV2Q9Y5S1 764 aa10.87□□□□□ -0.67
CLN6-203ENST00000563917 COL4A4P53420 1690 aaPredicted RBP10.87□□□□□ -0.67
CLN6-203ENST00000563917 ADGRA3Q8IWK6 1321 aa10.86□□□□□ -0.67
CLN6-203ENST00000563917 SMIM35A0A1B0GVV1 85 aa10.86□□□□□ -0.67
CLN6-203ENST00000563917 DDX39AO00148 427 aaKnown RBP10.86□□□□□ -0.67
CLN6-203ENST00000563917 ENPP3O14638 875 aa10.86□□□□□ -0.67
CLN6-203ENST00000563917 NCK2O43639 380 aa10.86□□□□□ -0.67
CLN6-203ENST00000563917 HBP1O60381 514 aa10.86□□□□□ -0.67
CLN6-203ENST00000563917 COL9A1P20849 921 aa10.86□□□□□ -0.67
CLN6-203ENST00000563917 CD52P31358 61 aa10.86□□□□□ -0.67
CLN6-203ENST00000563917 ADD1P35611 737 aaKnown RBP10.86□□□□□ -0.67
CLN6-203ENST00000563917 SETQ01105 290 aaPredicted RBP10.86□□□□□ -0.67
CLN6-203ENST00000563917 MGAT3Q09327 533 aa10.86□□□□□ -0.67
CLN6-203ENST00000563917 APOBRQ0VD83 1088 aa10.86□□□□□ -0.67
CLN6-203ENST00000563917 PAK2Q13177 524 aa10.86□□□□□ -0.67
CLN6-203ENST00000563917 MKRN4PQ13434 485 aaPredicted RBP10.86□□□□□ -0.67
CLN6-203ENST00000563917 COL9A3Q14050 684 aaPredicted RBP10.86□□□□□ -0.67
CLN6-203ENST00000563917 PLCB4Q15147 1175 aa10.86□□□□□ -0.67
CLN6-203ENST00000563917 PFKFB3Q16875 520 aaPredicted RBP10.86□□□□□ -0.67
CLN6-203ENST00000563917 PDXDC2PQ6P474 469 aa10.86□□□□□ -0.67
CLN6-203ENST00000563917 Q6ZUG5 572 aa10.86□□□□□ -0.67
CLN6-203ENST00000563917 RASEFQ8IZ41 740 aa10.86□□□□□ -0.67
CLN6-203ENST00000563917 REXO1Q8N1G1 1221 aaKnown RBP10.86□□□□□ -0.67
CLN6-203ENST00000563917 CCDC148Q8NFR7 591 aa10.86□□□□□ -0.67
CLN6-203ENST00000563917 CYP2W1Q8TAV3 490 aa10.86□□□□□ -0.67
CLN6-203ENST00000563917 BRF1Q92994 677 aa10.86□□□□□ -0.67
CLN6-203ENST00000563917 ZNF577Q9BSK1 485 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms