RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 IPO9Q96P70 1041 aaKnown RBP21.32■■□□□ 1
SYNGR3-203ENST00000563869 TEKT3Q9BXF9 490 aa21.32■■□□□ 1
SYNGR3-203ENST00000563869 PDGFCQ9NRA1 345 aa21.32■■□□□ 1
SYNGR3-203ENST00000563869 CXXC1Q9P0U4 656 aaPredicted RBP21.32■■□□□ 1
SYNGR3-203ENST00000563869 CFAP45Q9UL16 551 aa21.32■■□□□ 1
SYNGR3-203ENST00000563869 CHD9Q3L8U1 2897 aa21.31■■□□□ 1
SYNGR3-203ENST00000563869 GAS7O60861 476 aa21.31■■□□□ 1
SYNGR3-203ENST00000563869 PPFIA4O75335 1185 aa21.31■■□□□ 1
SYNGR3-203ENST00000563869 GGPS1O95749 300 aa21.31■■□□□ 1
SYNGR3-203ENST00000563869 F13A1P00488 732 aa21.31■■□□□ 1
SYNGR3-203ENST00000563869 KCNA2P16389 499 aa21.31■■□□□ 1
SYNGR3-203ENST00000563869 IGFBP4P22692 258 aa21.31■■□□□ 1
SYNGR3-203ENST00000563869 PRPHP41219 470 aa21.31■■□□□ 1
SYNGR3-203ENST00000563869 CCDC85BQ15834 202 aaPredicted RBP21.31■■□□□ 1
SYNGR3-203ENST00000563869 FSCN1Q16658 493 aaKnown RBP21.31■■□□□ 1
SYNGR3-203ENST00000563869 DGKDQ16760 1214 aa21.31■■□□□ 1
SYNGR3-203ENST00000563869 ARL6IP4Q66PJ3 421 aaKnown RBP21.31■■□□□ 1
SYNGR3-203ENST00000563869 ZNF746Q6NUN9 644 aaPredicted RBP21.31■■□□□ 1
SYNGR3-203ENST00000563869 ADAMTS19Q8TE59 1207 aa21.31■■□□□ 1
SYNGR3-203ENST00000563869 SLC5A5Q92911 643 aa21.31■■□□□ 1
SYNGR3-203ENST00000563869 NKX2-4Q9H2Z4 354 aa21.31■■□□□ 1
SYNGR3-203ENST00000563869 HIPK3Q9H422 1215 aa21.31■■□□□ 1
SYNGR3-203ENST00000563869 SLC28A3Q9HAS3 691 aa21.31■■□□□ 1
SYNGR3-203ENST00000563869 SLC9A2Q9UBY0 812 aa21.31■■□□□ 1
SYNGR3-203ENST00000563869 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.3■■□□□ 1
SYNGR3-203ENST00000563869 A6NJR5 290 aa21.3■■□□□ 1
SYNGR3-203ENST00000563869 KIF28PB7ZC32 967 aa21.3■■□□□ 1
SYNGR3-203ENST00000563869 DKC1O60832 514 aaKnown RBP eCLIP21.3■■□□□ 1
SYNGR3-203ENST00000563869 TDP2O95551 362 aa21.3■■□□□ 1
SYNGR3-203ENST00000563869 BRD1O95696 1058 aa21.3■■□□□ 1
SYNGR3-203ENST00000563869 JAK3P52333 1124 aa21.3■■□□□ 1
SYNGR3-203ENST00000563869 RESTQ13127 1097 aa21.3■■□□□ 1
SYNGR3-203ENST00000563869 LY6KQ17RY6 165 aa21.3■■□□□ 1
SYNGR3-203ENST00000563869 LRCH2Q5VUJ6 765 aa21.3■■□□□ 1
SYNGR3-203ENST00000563869 CXCL17Q6UXB2 119 aa21.3■■□□□ 1
SYNGR3-203ENST00000563869 LENG9Q96B70 501 aa21.3■■□□□ 1
SYNGR3-203ENST00000563869 SPATA33Q96N06 139 aa21.3■■□□□ 1
SYNGR3-203ENST00000563869 KATNAL1Q9BW62 490 aa21.3■■□□□ 1
SYNGR3-203ENST00000563869 KCNMB3Q9NPA1 279 aa21.3■■□□□ 1
SYNGR3-203ENST00000563869 YBX2Q9Y2T7 364 aaKnown RBP21.3■■□□□ 1
SYNGR3-203ENST00000563869 MORC2Q9Y6X9 1032 aaPredicted RBP21.3■■□□□ 1
SYNGR3-203ENST00000563869 DOCK5Q9H7D0 1870 aa21.3■■□□□ 1
SYNGR3-203ENST00000563869 ADAMTS3O15072 1205 aa21.29■■□□□ 1
SYNGR3-203ENST00000563869 MSH4O15457 936 aa21.29■■□□□ 1
SYNGR3-203ENST00000563869 DYNC1LI2O43237 492 aaPredicted RBP21.29■■□□□ 1
SYNGR3-203ENST00000563869 OR52Z1P0C646 297 aa21.29■■□□□ 1
SYNGR3-203ENST00000563869 MCM7P33993 719 aa21.29■■□□□ 1
SYNGR3-203ENST00000563869 SLC26A2P50443 739 aa21.29■■□□□ 1
SYNGR3-203ENST00000563869 ARHGAP1Q07960 439 aa21.29■■□□□ 1
SYNGR3-203ENST00000563869 ITGA7Q13683 1181 aa21.29■■□□□ 1
SYNGR3-203ENST00000563869 EARS2Q5JPH6 523 aaKnown RBP21.29■■□□□ 1
SYNGR3-203ENST00000563869 SEPT1Q8WYJ6 367 aa21.29■■□□□ 1
SYNGR3-203ENST00000563869 UHRF1Q96T88 793 aaPredicted RBP21.29■■□□□ 1
SYNGR3-203ENST00000563869 PCDHA12Q9UN75 941 aa21.29■■□□□ 1
SYNGR3-203ENST00000563869 WDR81Q562E7 1941 aa21.29■■□□□ 1
SYNGR3-203ENST00000563869 UMODL1Q5DID0 1318 aa21.29■■□□□ 1
SYNGR3-203ENST00000563869 KAT6AQ92794 2004 aa21.28■■□□□ 1
SYNGR3-203ENST00000563869 WDR64B1ANS9 1081 aa21.28■■□□□ 1
SYNGR3-203ENST00000563869 ARP10275 920 aa21.28■■□□□ 1
SYNGR3-203ENST00000563869 ATP2B1P20020 1258 aa21.28■■□□□ 1
SYNGR3-203ENST00000563869 CYFIP1Q7L576 1253 aa21.28■■□□□ 1
SYNGR3-203ENST00000563869 OTOP2Q7RTS6 562 aa21.28■■□□□ 1
SYNGR3-203ENST00000563869 FERMT3Q86UX7 667 aa21.28■■□□□ 1
SYNGR3-203ENST00000563869 CYP2W1Q8TAV3 490 aa21.28■■□□□ 1
SYNGR3-203ENST00000563869 ETNPPLQ8TBG4 499 aa21.28■■□□□ 1
SYNGR3-203ENST00000563869 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.28■■□□□ 1
SYNGR3-203ENST00000563869 ZNF215Q9UL58 517 aaPredicted RBP21.28■■□□□ 1
SYNGR3-203ENST00000563869 GRIN2DO15399 1336 aa21.28■■□□□ 1
SYNGR3-203ENST00000563869 LOXHD1Q8IVV2 1947 aa21.27■■□□□ 1
SYNGR3-203ENST00000563869 ARIH2O95376 493 aa21.27■■□□□ 1
SYNGR3-203ENST00000563869 HOXD8P13378 290 aaPredicted RBP21.27■■□□□ 1
SYNGR3-203ENST00000563869 SEMA3FQ13275 785 aa21.27■■□□□ 1
SYNGR3-203ENST00000563869 MIS18BP1Q6P0N0 1132 aa21.27■■□□□ 1
SYNGR3-203ENST00000563869 NEK9Q8TD19 979 aa21.27■■□□□ 1
SYNGR3-203ENST00000563869 NOC4LQ9BVI4 516 aaKnown RBP21.27■■□□□ 1
SYNGR3-203ENST00000563869 AZI2Q9H6S1 392 aa21.27■■□□□ 1
SYNGR3-203ENST00000563869 FAM205CA6NFA0 338 aa21.26■□□□□ 0.99
SYNGR3-203ENST00000563869 PSAPP07602 524 aa21.26■□□□□ 0.99
SYNGR3-203ENST00000563869 CCL23P55773 120 aa21.26■□□□□ 0.99
SYNGR3-203ENST00000563869 PPP2R5CQ13362 524 aa21.26■□□□□ 0.99
SYNGR3-203ENST00000563869 FAM160B1Q5W0V3 765 aa21.26■□□□□ 0.99
SYNGR3-203ENST00000563869 RPUSD2Q8IZ73 545 aaKnown RBP21.26■□□□□ 0.99
SYNGR3-203ENST00000563869 ERMNQ8TAM6 284 aa21.26■□□□□ 0.99
SYNGR3-203ENST00000563869 TSPYL2Q9H2G4 693 aaPredicted RBP21.26■□□□□ 0.99
SYNGR3-203ENST00000563869 CHMP5Q9NZZ3 219 aa21.26■□□□□ 0.99
SYNGR3-203ENST00000563869 PCDHA10Q9Y5I2 948 aa21.26■□□□□ 0.99
SYNGR3-203ENST00000563869 SLC26A4O43511 780 aa21.25■□□□□ 0.99
SYNGR3-203ENST00000563869 SLC37A4O43826 429 aa21.25■□□□□ 0.99
SYNGR3-203ENST00000563869 B4GALT4O60513 344 aa21.25■□□□□ 0.99
SYNGR3-203ENST00000563869 PSMD10O75832 226 aa21.25■□□□□ 0.99
SYNGR3-203ENST00000563869 MMP3P08254 477 aa21.25■□□□□ 0.99
SYNGR3-203ENST00000563869 TOB1P50616 345 aaPredicted RBP21.25■□□□□ 0.99
SYNGR3-203ENST00000563869 ATP2C1P98194 919 aaPredicted RBP21.25■□□□□ 0.99
SYNGR3-203ENST00000563869 SP2Q02086 613 aa21.25■□□□□ 0.99
SYNGR3-203ENST00000563869 PDIA5Q14554 519 aa21.25■□□□□ 0.99
SYNGR3-203ENST00000563869 ZNF174Q15697 407 aa21.25■□□□□ 0.99
SYNGR3-203ENST00000563869 DTHD1Q6ZMT9 781 aa21.25■□□□□ 0.99
SYNGR3-203ENST00000563869 POTEDQ86YR6 584 aa21.25■□□□□ 0.99
SYNGR3-203ENST00000563869 KCTD17Q8N5Z5 321 aa21.25■□□□□ 0.99
SYNGR3-203ENST00000563869 MTMR9Q96QG7 549 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms