RNA–Protein interactions for RNA: ENST00000563645.1

GDE1-202, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 2

Gene GDE1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-202ENST00000563645 SMAD2Q15796 467 aaKnown RBP5.6□□□□□ -1.51
GDE1-202ENST00000563645 EP400NLQ6ZTU2 488 aa5.6□□□□□ -1.51
GDE1-202ENST00000563645 CISD2Q8N5K1 135 aaKnown RBP5.6□□□□□ -1.51
GDE1-202ENST00000563645 IGDCC4Q8TDY8 1250 aa5.6□□□□□ -1.51
GDE1-202ENST00000563645 MBD6Q96DN6 1003 aa5.6□□□□□ -1.51
GDE1-202ENST00000563645 SCLYQ96I15 445 aa5.6□□□□□ -1.51
GDE1-202ENST00000563645 CELF4Q9BZC1 486 aaKnown RBP5.6□□□□□ -1.51
GDE1-202ENST00000563645 ZSWIM4Q9H7M6 989 aa5.6□□□□□ -1.51
GDE1-202ENST00000563645 KCND1Q9NSA2 647 aa5.6□□□□□ -1.51
GDE1-202ENST00000563645 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.59□□□□□ -1.51
GDE1-202ENST00000563645 CLASP2O75122 1294 aaKnown RBP5.59□□□□□ -1.51
GDE1-202ENST00000563645 KNG1P01042 644 aa5.59□□□□□ -1.51
GDE1-202ENST00000563645 PLP2Q04941 152 aa5.59□□□□□ -1.51
GDE1-202ENST00000563645 PKN3Q6P5Z2 889 aa5.59□□□□□ -1.51
GDE1-202ENST00000563645 HHIPL2Q6UWX4 724 aa5.59□□□□□ -1.51
GDE1-202ENST00000563645 PLEKHH3Q7Z736 793 aa5.59□□□□□ -1.51
GDE1-202ENST00000563645 NPM2Q86SE8 214 aaKnown RBP5.59□□□□□ -1.51
GDE1-202ENST00000563645 KLHL36Q8N4N3 616 aa5.59□□□□□ -1.51
GDE1-202ENST00000563645 TRIM39Q9HCM9 518 aa5.59□□□□□ -1.51
GDE1-202ENST00000563645 SLC39A2Q9NP94 309 aa5.59□□□□□ -1.51
GDE1-202ENST00000563645 CNOT11Q9UKZ1 510 aaKnown RBP5.59□□□□□ -1.51
GDE1-202ENST00000563645 INVSQ9Y283 1065 aa5.59□□□□□ -1.51
GDE1-202ENST00000563645 COQ6Q9Y2Z9 468 aa5.59□□□□□ -1.51
GDE1-202ENST00000563645 TCRBV16S1A1N1A0A5B0 115 aa5.58□□□□□ -1.52
GDE1-202ENST00000563645 KCNK3O14649 394 aa5.58□□□□□ -1.52
GDE1-202ENST00000563645 PLD2O14939 933 aa5.58□□□□□ -1.52
GDE1-202ENST00000563645 B4GALT3O60512 393 aa5.58□□□□□ -1.52
GDE1-202ENST00000563645 KLHL18O94889 574 aa5.58□□□□□ -1.52
GDE1-202ENST00000563645 PLATP00750 562 aa5.58□□□□□ -1.52
GDE1-202ENST00000563645 C4BPAP04003 597 aaKnown RBP5.58□□□□□ -1.52
GDE1-202ENST00000563645 SQSTM1Q13501 440 aa5.58□□□□□ -1.52
GDE1-202ENST00000563645 FGD2Q7Z6J4 655 aa5.58□□□□□ -1.52
GDE1-202ENST00000563645 STPG3Q8N7X2 389 aa5.58□□□□□ -1.52
GDE1-202ENST00000563645 NUDT10Q8NFP7 164 aa5.58□□□□□ -1.52
GDE1-202ENST00000563645 NUDT11Q96G61 164 aa5.58□□□□□ -1.52
GDE1-202ENST00000563645 KRTAP4-9Q9BYQ8 210 aa5.58□□□□□ -1.52
GDE1-202ENST00000563645 BARX1Q9HBU1 254 aaPredicted RBP5.58□□□□□ -1.52
GDE1-202ENST00000563645 ARHGAP28Q9P2N2 729 aa5.58□□□□□ -1.52
GDE1-202ENST00000563645 PRAMEF25A6NGN4 478 aa5.57□□□□□ -1.52
GDE1-202ENST00000563645 K7ESM1 405 aa5.57□□□□□ -1.52
GDE1-202ENST00000563645 NPTXRO95502 500 aa5.57□□□□□ -1.52
GDE1-202ENST00000563645 IL18BPO95998 194 aa5.57□□□□□ -1.52
GDE1-202ENST00000563645 ITGB3P05106 788 aa5.57□□□□□ -1.52
GDE1-202ENST00000563645 HERVK_113P62684 666 aa5.57□□□□□ -1.52
GDE1-202ENST00000563645 EFEMP1Q12805 493 aa5.57□□□□□ -1.52
GDE1-202ENST00000563645 NFATC3Q12968 1075 aa5.57□□□□□ -1.52
GDE1-202ENST00000563645 SURF1Q15526 300 aa5.57□□□□□ -1.52
GDE1-202ENST00000563645 CCDC144BQ3MJ40 725 aa5.57□□□□□ -1.52
GDE1-202ENST00000563645 TBC1D10BQ4KMP7 808 aaPredicted RBP5.57□□□□□ -1.52
GDE1-202ENST00000563645 NOSTRINQ8IVI9 506 aa5.57□□□□□ -1.52
GDE1-202ENST00000563645 SH3TC2Q8TF17 1288 aa5.57□□□□□ -1.52
GDE1-202ENST00000563645 TACO1Q9BSH4 297 aaKnown RBP5.57□□□□□ -1.52
GDE1-202ENST00000563645 H0Y858 1186 aa5.56□□□□□ -1.52
GDE1-202ENST00000563645 LAMTOR5O43504 91 aa5.56□□□□□ -1.52
GDE1-202ENST00000563645 RAPGEF3O95398 923 aa5.56□□□□□ -1.52
GDE1-202ENST00000563645 KCNA6P17658 529 aa5.56□□□□□ -1.52
GDE1-202ENST00000563645 PTGS1P23219 599 aa5.56□□□□□ -1.52
GDE1-202ENST00000563645 AOAHP28039 575 aa5.56□□□□□ -1.52
GDE1-202ENST00000563645 FNDC3BQ53EP0 1204 aaKnown RBP5.56□□□□□ -1.52
GDE1-202ENST00000563645 CPZQ66K79 652 aa5.56□□□□□ -1.52
GDE1-202ENST00000563645 FSTL4Q6MZW2 842 aa5.56□□□□□ -1.52
GDE1-202ENST00000563645 ABHD17CQ6PCB6 329 aa5.56□□□□□ -1.52
GDE1-202ENST00000563645 Q6ZUG5 572 aa5.56□□□□□ -1.52
GDE1-202ENST00000563645 OVCH1Q7RTY7 1134 aa5.56□□□□□ -1.52
GDE1-202ENST00000563645 PRRT2Q7Z6L0 340 aaPredicted RBP5.56□□□□□ -1.52
GDE1-202ENST00000563645 REXO1L1PQ8IX06 675 aa5.56□□□□□ -1.52
GDE1-202ENST00000563645 KBTBD2Q8IY47 623 aa5.56□□□□□ -1.52
GDE1-202ENST00000563645 ADAM29Q9UKF5 820 aa5.56□□□□□ -1.52
GDE1-202ENST00000563645 SEC23AQ15436 765 aa5.55□□□□□ -1.52
GDE1-202ENST00000563645 SPATS1Q496A3 300 aa5.55□□□□□ -1.52
GDE1-202ENST00000563645 TMEM177Q53S58 311 aa5.55□□□□□ -1.52
GDE1-202ENST00000563645 IGSF22Q8N9C0 903 aa5.55□□□□□ -1.52
GDE1-202ENST00000563645 AJUBAQ96IF1 538 aa5.55□□□□□ -1.52
GDE1-202ENST00000563645 RBM15Q96T37 977 aaKnown RBP eCLIP5.55□□□□□ -1.52
GDE1-202ENST00000563645 PIF1Q9H611 641 aa5.55□□□□□ -1.52
GDE1-202ENST00000563645 KANSL2Q9H9L4 492 aa5.55□□□□□ -1.52
GDE1-202ENST00000563645 KCNH7Q9NS40 1196 aa5.55□□□□□ -1.52
GDE1-202ENST00000563645 TMEM260Q9NX78 707 aa5.55□□□□□ -1.52
GDE1-202ENST00000563645 BTBD7Q9P203 1132 aa5.55□□□□□ -1.52
GDE1-202ENST00000563645 ZNF536O15090 1300 aa5.54□□□□□ -1.52
GDE1-202ENST00000563645 SLC12A8A0AV02 714 aa5.54□□□□□ -1.52
GDE1-202ENST00000563645 B4E1Z4 1266 aa5.54□□□□□ -1.52
GDE1-202ENST00000563645 SCDO00767 359 aa5.54□□□□□ -1.52
GDE1-202ENST00000563645 MC4RP32245 332 aa5.54□□□□□ -1.52
GDE1-202ENST00000563645 CSF2RBP32927 897 aa5.54□□□□□ -1.52
GDE1-202ENST00000563645 IGFALSP35858 605 aa5.54□□□□□ -1.52
GDE1-202ENST00000563645 EPHB4P54760 987 aa5.54□□□□□ -1.52
GDE1-202ENST00000563645 ZNF827Q17R98 1081 aa5.54□□□□□ -1.52
GDE1-202ENST00000563645 TM4SF20Q53R12 229 aa5.54□□□□□ -1.52
GDE1-202ENST00000563645 DPP8Q6V1X1 898 aaPredicted RBP5.54□□□□□ -1.52
GDE1-202ENST00000563645 RALYLQ86SE5 291 aaKnown RBP5.54□□□□□ -1.52
GDE1-202ENST00000563645 DDX53Q86TM3 631 aaKnown RBP5.54□□□□□ -1.52
GDE1-202ENST00000563645 CLUHP3Q96NS8 147 aa5.54□□□□□ -1.52
GDE1-202ENST00000563645 INCENPQ9NQS7 918 aa5.54□□□□□ -1.52
GDE1-202ENST00000563645 ZDHHC9Q9Y397 364 aa5.54□□□□□ -1.52
GDE1-202ENST00000563645 B3GALT1Q9Y5Z6 326 aa5.54□□□□□ -1.52
GDE1-202ENST00000563645 HIP1RO75146 1068 aa5.53□□□□□ -1.52
GDE1-202ENST00000563645 DNAJC8O75937 253 aaPredicted RBP5.53□□□□□ -1.52
GDE1-202ENST00000563645 MPIG6BO95866 241 aa5.53□□□□□ -1.52
GDE1-202ENST00000563645 ASLP04424 464 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms