RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 IGFALSP35858 605 aa7.03□□□□□ -1.28
LINC00254-201ENST00000563416 SARSP49591 514 aaKnown RBP7.03□□□□□ -1.28
LINC00254-201ENST00000563416 BTBD8Q5XKL5 378 aa7.03□□□□□ -1.28
LINC00254-201ENST00000563416 FGD2Q7Z6J4 655 aa7.03□□□□□ -1.28
LINC00254-201ENST00000563416 DDX53Q86TM3 631 aaKnown RBP7.03□□□□□ -1.28
LINC00254-201ENST00000563416 STK32CQ86UX6 486 aa7.03□□□□□ -1.28
LINC00254-201ENST00000563416 PTRH1Q86Y79 214 aaKnown RBP7.03□□□□□ -1.28
LINC00254-201ENST00000563416 CARFQ8N187 725 aa7.03□□□□□ -1.28
LINC00254-201ENST00000563416 CISD2Q8N5K1 135 aaKnown RBP7.03□□□□□ -1.28
LINC00254-201ENST00000563416 SH3RF2Q8TEC5 729 aa7.03□□□□□ -1.28
LINC00254-201ENST00000563416 ZCCHC4Q9H5U6 513 aa7.03□□□□□ -1.28
LINC00254-201ENST00000563416 RIC8BQ9NVN3 520 aa7.03□□□□□ -1.28
LINC00254-201ENST00000563416 FANCLQ9NW38 375 aa7.03□□□□□ -1.28
LINC00254-201ENST00000563416 COQ6Q9Y2Z9 468 aa7.03□□□□□ -1.28
LINC00254-201ENST00000563416 GOLGA3Q08378 1498 aa7.03□□□□□ -1.28
LINC00254-201ENST00000563416 MAPKBP1O60336 1514 aa7.02□□□□□ -1.29
LINC00254-201ENST00000563416 ZNF561-AS1K7EIQ3 104 aa7.02□□□□□ -1.29
LINC00254-201ENST00000563416 PPP1R12AO14974 1030 aaPredicted RBP7.02□□□□□ -1.29
LINC00254-201ENST00000563416 OPA1O60313 960 aa7.02□□□□□ -1.29
LINC00254-201ENST00000563416 TRIM13O60858 407 aa7.02□□□□□ -1.29
LINC00254-201ENST00000563416 CKMP06732 381 aa7.02□□□□□ -1.29
LINC00254-201ENST00000563416 ENO2P09104 434 aaPredicted RBP7.02□□□□□ -1.29
LINC00254-201ENST00000563416 PTPN1P18031 435 aaKnown RBP7.02□□□□□ -1.29
LINC00254-201ENST00000563416 RPL13P26373 211 aaKnown RBP7.02□□□□□ -1.29
LINC00254-201ENST00000563416 FLT3P36888 993 aa7.02□□□□□ -1.29
LINC00254-201ENST00000563416 KCNC1P48547 511 aa7.02□□□□□ -1.29
LINC00254-201ENST00000563416 JAM2P57087 298 aa7.02□□□□□ -1.29
LINC00254-201ENST00000563416 DLX2Q07687 328 aaPredicted RBP7.02□□□□□ -1.29
LINC00254-201ENST00000563416 ADAM9Q13443 819 aa7.02□□□□□ -1.29
LINC00254-201ENST00000563416 FBLN7Q53RD9 439 aa7.02□□□□□ -1.29
LINC00254-201ENST00000563416 TMC5Q6UXY8 1006 aa7.02□□□□□ -1.29
LINC00254-201ENST00000563416 C16orf86Q6ZW13 317 aa7.02□□□□□ -1.29
LINC00254-201ENST00000563416 TP53I13Q8NBR0 393 aaPredicted RBP7.02□□□□□ -1.29
LINC00254-201ENST00000563416 CLUHP3Q96NS8 147 aa7.02□□□□□ -1.29
LINC00254-201ENST00000563416 DLL4Q9NR61 685 aa7.02□□□□□ -1.29
LINC00254-201ENST00000563416 SPATA6Q9NWH7 488 aaPredicted RBP7.02□□□□□ -1.29
LINC00254-201ENST00000563416 TELO2Q9Y4R8 837 aa7.02□□□□□ -1.29
LINC00254-201ENST00000563416 MRPL42Q9Y6G3 142 aaKnown RBP7.02□□□□□ -1.29
LINC00254-201ENST00000563416 EFCAB5A4FU69 1503 aa7.01□□□□□ -1.29
LINC00254-201ENST00000563416 ABCC2Q92887 1545 aa7.01□□□□□ -1.29
LINC00254-201ENST00000563416 ZCCHC11Q5TAX3 1644 aaKnown RBP7.01□□□□□ -1.29
LINC00254-201ENST00000563416 ARID1BQ8NFD5 2236 aaPredicted RBP7.01□□□□□ -1.29
LINC00254-201ENST00000563416 ABCA8O94911 1581 aa7.01□□□□□ -1.29
LINC00254-201ENST00000563416 UHRF1BP1LA0JNW5 1464 aa7.01□□□□□ -1.29
LINC00254-201ENST00000563416 TNIKQ9UKE5 1360 aa7.01□□□□□ -1.29
LINC00254-201ENST00000563416 MAN2B1O00754 1011 aa7.01□□□□□ -1.29
LINC00254-201ENST00000563416 CLASP2O75122 1294 aaKnown RBP7.01□□□□□ -1.29
LINC00254-201ENST00000563416 CDC45O75419 566 aa7.01□□□□□ -1.29
LINC00254-201ENST00000563416 AMY2AP04746 511 aa7.01□□□□□ -1.29
LINC00254-201ENST00000563416 AMY2BP19961 511 aa7.01□□□□□ -1.29
LINC00254-201ENST00000563416 SLURP1P55000 103 aa7.01□□□□□ -1.29
LINC00254-201ENST00000563416 PABPC4Q13310 644 aaKnown RBP eCLIP7.01□□□□□ -1.29
LINC00254-201ENST00000563416 HHIPL2Q6UWX4 724 aa7.01□□□□□ -1.29
LINC00254-201ENST00000563416 IGSF22Q8N9C0 903 aa7.01□□□□□ -1.29
LINC00254-201ENST00000563416 KCNC2Q96PR1 638 aa7.01□□□□□ -1.29
LINC00254-201ENST00000563416 SYT3Q9BQG1 590 aa7.01□□□□□ -1.29
LINC00254-201ENST00000563416 PARD6AQ9NPB6 346 aa7.01□□□□□ -1.29
LINC00254-201ENST00000563416 A0A1B0GTL3 188 aa7□□□□□ -1.29
LINC00254-201ENST00000563416 TMEM177Q53S58 311 aa7□□□□□ -1.29
LINC00254-201ENST00000563416 PRAMEF18Q5VWM3 479 aa7□□□□□ -1.29
LINC00254-201ENST00000563416 CD276Q5ZPR3 534 aa7□□□□□ -1.29
LINC00254-201ENST00000563416 ZCCHC8Q6NZY4 707 aaKnown RBP7□□□□□ -1.29
LINC00254-201ENST00000563416 JAZF1Q86VZ6 243 aa7□□□□□ -1.29
LINC00254-201ENST00000563416 ADGRG2Q8IZP9 1017 aa7□□□□□ -1.29
LINC00254-201ENST00000563416 C2orf69Q8N8R5 385 aa7□□□□□ -1.29
LINC00254-201ENST00000563416 ZSWIM3Q96MP5 696 aa7□□□□□ -1.29
LINC00254-201ENST00000563416 SPATA25Q9BR10 227 aa7□□□□□ -1.29
LINC00254-201ENST00000563416 SMURF1Q9HCE7 757 aa7□□□□□ -1.29
LINC00254-201ENST00000563416 INTS7Q9NVH2 962 aaKnown RBP7□□□□□ -1.29
LINC00254-201ENST00000563416 MAGEC2Q9UBF1 373 aaPredicted RBP7□□□□□ -1.29
LINC00254-201ENST00000563416 RAPGEFL1Q9UHV5 662 aa7□□□□□ -1.29
LINC00254-201ENST00000563416 CROTQ9UKG9 612 aa7□□□□□ -1.29
LINC00254-201ENST00000563416 DIP2BQ9P265 1576 aa6.99□□□□□ -1.29
LINC00254-201ENST00000563416 SLC12A8A0AV02 714 aa6.99□□□□□ -1.29
LINC00254-201ENST00000563416 HIP1RO75146 1068 aa6.99□□□□□ -1.29
LINC00254-201ENST00000563416 INHBBP09529 407 aa6.99□□□□□ -1.29
LINC00254-201ENST00000563416 ARHGAP44Q17R89 818 aa6.99□□□□□ -1.29
LINC00254-201ENST00000563416 TAF7LQ5H9L4 462 aa6.99□□□□□ -1.29
LINC00254-201ENST00000563416 UBE2R2Q712K3 238 aaPredicted RBP6.99□□□□□ -1.29
LINC00254-201ENST00000563416 OVCH1Q7RTY7 1134 aa6.99□□□□□ -1.29
LINC00254-201ENST00000563416 DTX3Q8N9I9 347 aa6.99□□□□□ -1.29
LINC00254-201ENST00000563416 L2HGDHQ9H9P8 463 aa6.99□□□□□ -1.29
LINC00254-201ENST00000563416 SAMD15Q9P1V8 674 aa6.99□□□□□ -1.29
LINC00254-201ENST00000563416 PTPRGP23470 1445 aa6.99□□□□□ -1.29
LINC00254-201ENST00000563416 RAPGEF6Q8TEU7 1601 aa6.98□□□□□ -1.29
LINC00254-201ENST00000563416 PRAMEF25A6NGN4 478 aa6.98□□□□□ -1.29
LINC00254-201ENST00000563416 FAM90A27PA6NNH2 459 aa6.98□□□□□ -1.29
LINC00254-201ENST00000563416 ACOT7O00154 380 aa6.98□□□□□ -1.29
LINC00254-201ENST00000563416 DNAJC8O75937 253 aaPredicted RBP6.98□□□□□ -1.29
LINC00254-201ENST00000563416 FBXO21O94952 628 aa6.98□□□□□ -1.29
LINC00254-201ENST00000563416 KCNA6P17658 529 aa6.98□□□□□ -1.29
LINC00254-201ENST00000563416 GJA9P57773 515 aa6.98□□□□□ -1.29
LINC00254-201ENST00000563416 DBPQ10586 325 aaPredicted RBP6.98□□□□□ -1.29
LINC00254-201ENST00000563416 SKIDA1Q1XH10 827 aa6.98□□□□□ -1.29
LINC00254-201ENST00000563416 FAM26FQ5R3K3 315 aa6.98□□□□□ -1.29
LINC00254-201ENST00000563416 PRR31Q5SQ13 230 aa6.98□□□□□ -1.29
LINC00254-201ENST00000563416 ABHD17CQ6PCB6 329 aa6.98□□□□□ -1.29
LINC00254-201ENST00000563416 PROSER1Q86XN7 944 aa6.98□□□□□ -1.29
LINC00254-201ENST00000563416 IGDCC4Q8TDY8 1250 aa6.98□□□□□ -1.29
LINC00254-201ENST00000563416 ADAMTS17Q8TE56 1095 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms