RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 RSPH3Q86UC2 560 aa18■□□□□ 0.47
CLK3-211ENST00000563297 TEX2Q8IWB9 1127 aa18■□□□□ 0.47
CLK3-211ENST00000563297 TMEM192Q8IY95 271 aa18■□□□□ 0.47
CLK3-211ENST00000563297 ZBTB10Q96DT7 871 aa18■□□□□ 0.47
CLK3-211ENST00000563297 MRPL38Q96DV4 380 aaKnown RBP18■□□□□ 0.47
CLK3-211ENST00000563297 JPH1Q9HDC5 661 aaPredicted RBP18■□□□□ 0.47
CLK3-211ENST00000563297 TTC3P53804 2025 aa17.99■□□□□ 0.47
CLK3-211ENST00000563297 NFASCO94856 1347 aa17.99■□□□□ 0.47
CLK3-211ENST00000563297 SMCO2A6NFE2 343 aa17.99■□□□□ 0.47
CLK3-211ENST00000563297 RRN3P2A6NIE6 340 aa17.99■□□□□ 0.47
CLK3-211ENST00000563297 H3BNC9 293 aa17.99■□□□□ 0.47
CLK3-211ENST00000563297 STXBP3O00186 592 aa17.99■□□□□ 0.47
CLK3-211ENST00000563297 ENPP3O14638 875 aa17.99■□□□□ 0.47
CLK3-211ENST00000563297 CDC27P30260 824 aa17.99■□□□□ 0.47
CLK3-211ENST00000563297 IGBP1P78318 339 aa17.99■□□□□ 0.47
CLK3-211ENST00000563297 CEP55Q53EZ4 464 aa17.99■□□□□ 0.47
CLK3-211ENST00000563297 PPP1R18Q6NYC8 613 aa17.99■□□□□ 0.47
CLK3-211ENST00000563297 IL17RAQ96F46 866 aa17.99■□□□□ 0.47
CLK3-211ENST00000563297 ANO3Q9BYT9 981 aa17.99■□□□□ 0.47
CLK3-211ENST00000563297 UBE2ZQ9H832 354 aaPredicted RBP17.99■□□□□ 0.47
CLK3-211ENST00000563297 BARHL2Q9NY43 387 aa17.99■□□□□ 0.47
CLK3-211ENST00000563297 CDY2AQ9Y6F7 541 aa17.99■□□□□ 0.47
CLK3-211ENST00000563297 KLF18A0A0U1RQI7 1052 aa17.98■□□□□ 0.47
CLK3-211ENST00000563297 hCG_1984214I3L0E3 225 aa17.98■□□□□ 0.47
CLK3-211ENST00000563297 MEIS1O00470 390 aa17.98■□□□□ 0.47
CLK3-211ENST00000563297 CLK2P49760 499 aaKnown RBP17.98■□□□□ 0.47
CLK3-211ENST00000563297 ADCY7P51828 1080 aa17.98■□□□□ 0.47
CLK3-211ENST00000563297 ACTR2P61160 394 aa17.98■□□□□ 0.47
CLK3-211ENST00000563297 GPM6BQ13491 265 aa17.98■□□□□ 0.47
CLK3-211ENST00000563297 KRT32Q14532 448 aa17.98■□□□□ 0.47
CLK3-211ENST00000563297 FBXO47Q5MNV8 452 aa17.98■□□□□ 0.47
CLK3-211ENST00000563297 PLPPR4Q7Z2D5 763 aa17.98■□□□□ 0.47
CLK3-211ENST00000563297 ZNF713Q8N859 430 aaPredicted RBP17.98■□□□□ 0.47
CLK3-211ENST00000563297 SDF4Q9BRK5 362 aa17.98■□□□□ 0.47
CLK3-211ENST00000563297 AZI2Q9H6S1 392 aa17.98■□□□□ 0.47
CLK3-211ENST00000563297 AGO4Q9HCK5 861 aaKnown RBP17.98■□□□□ 0.47
CLK3-211ENST00000563297 TMEM260Q9NX78 707 aa17.98■□□□□ 0.47
CLK3-211ENST00000563297 NLRC5Q86WI3 1866 aa17.98■□□□□ 0.47
CLK3-211ENST00000563297 GOLGA8AA7E2F4 631 aa17.97■□□□□ 0.47
CLK3-211ENST00000563297 GOLGA8BA8MQT2 603 aa17.97■□□□□ 0.47
CLK3-211ENST00000563297 CDC45O75419 566 aa17.97■□□□□ 0.47
CLK3-211ENST00000563297 ATG7O95352 703 aa17.97■□□□□ 0.47
CLK3-211ENST00000563297 ADD1P35611 737 aaKnown RBP17.97■□□□□ 0.47
CLK3-211ENST00000563297 SREBF1P36956 1147 aa17.97■□□□□ 0.47
CLK3-211ENST00000563297 STAT5BP51692 787 aa17.97■□□□□ 0.47
CLK3-211ENST00000563297 MRPS6P82932 125 aaKnown RBP17.97■□□□□ 0.47
CLK3-211ENST00000563297 ITGB3BPQ13352 177 aaPredicted RBP17.97■□□□□ 0.47
CLK3-211ENST00000563297 PLCB4Q15147 1175 aa17.97■□□□□ 0.47
CLK3-211ENST00000563297 PTPROQ16827 1216 aa17.97■□□□□ 0.47
CLK3-211ENST00000563297 AGO3Q9H9G7 860 aaKnown RBP17.97■□□□□ 0.47
CLK3-211ENST00000563297 LOXHD1Q8IVV2 1947 aa17.97■□□□□ 0.47
CLK3-211ENST00000563297 HMGB1P09429 215 aaKnown RBP17.96■□□□□ 0.47
CLK3-211ENST00000563297 CPA1P15085 419 aa17.96■□□□□ 0.47
CLK3-211ENST00000563297 RCAN1P53805 252 aa17.96■□□□□ 0.47
CLK3-211ENST00000563297 AP3B2Q13367 1082 aa17.96■□□□□ 0.47
CLK3-211ENST00000563297 IER5Q5VY09 327 aa17.96■□□□□ 0.47
CLK3-211ENST00000563297 TSHZ1Q6ZSZ6 1077 aa17.96■□□□□ 0.47
CLK3-211ENST00000563297 RTN4RL1Q86UN2 441 aaPredicted RBP17.96■□□□□ 0.47
CLK3-211ENST00000563297 FIBCD1Q8N539 461 aa17.96■□□□□ 0.47
CLK3-211ENST00000563297 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.96■□□□□ 0.47
CLK3-211ENST00000563297 TRAPPC12Q8WVT3 735 aa17.96■□□□□ 0.47
CLK3-211ENST00000563297 KCNB2Q92953 911 aa17.96■□□□□ 0.47
CLK3-211ENST00000563297 TNPO1Q92973 898 aaKnown RBP17.96■□□□□ 0.47
CLK3-211ENST00000563297 FAM49AQ9H0Q0 323 aaPredicted RBP17.96■□□□□ 0.47
CLK3-211ENST00000563297 GLT8D2Q9H1C3 349 aa17.96■□□□□ 0.47
CLK3-211ENST00000563297 TRPC6Q9Y210 931 aa17.96■□□□□ 0.47
CLK3-211ENST00000563297 PCDHA2Q9Y5H9 948 aa17.96■□□□□ 0.47
CLK3-211ENST00000563297 COL4A6Q14031 1691 aa17.96■□□□□ 0.47
CLK3-211ENST00000563297 IGKV6D-21A0A0A0MT36 114 aa17.95■□□□□ 0.46
CLK3-211ENST00000563297 RPLP2P05387 115 aaKnown RBP17.95■□□□□ 0.46
CLK3-211ENST00000563297 LINC00271P0C7V0 271 aa17.95■□□□□ 0.46
CLK3-211ENST00000563297 KCNA5P22460 613 aa17.95■□□□□ 0.46
CLK3-211ENST00000563297 CD52P31358 61 aa17.95■□□□□ 0.46
CLK3-211ENST00000563297 ZNF76P36508 570 aa17.95■□□□□ 0.46
CLK3-211ENST00000563297 PFKFB3Q16875 520 aaPredicted RBP17.95■□□□□ 0.46
CLK3-211ENST00000563297 LEXMQ3ZCV2 418 aa17.95■□□□□ 0.46
CLK3-211ENST00000563297 BANK1Q8NDB2 785 aa17.95■□□□□ 0.46
CLK3-211ENST00000563297 ZNF689Q96CS4 500 aaPredicted RBP17.95■□□□□ 0.46
CLK3-211ENST00000563297 EPHX3Q9H6B9 360 aa17.95■□□□□ 0.46
CLK3-211ENST00000563297 RC3H2Q9HBD1 1191 aaKnown RBP17.95■□□□□ 0.46
CLK3-211ENST00000563297 RAPGEFL1Q9UHV5 662 aa17.95■□□□□ 0.46
CLK3-211ENST00000563297 NAP1L2Q9ULW6 460 aaPredicted RBP17.95■□□□□ 0.46
CLK3-211ENST00000563297 SQORQ9Y6N5 450 aa17.95■□□□□ 0.46
CLK3-211ENST00000563297 POTEB3A0JP26 581 aa17.94■□□□□ 0.46
CLK3-211ENST00000563297 FAM86B1E9PN63 330 aa17.94■□□□□ 0.46
CLK3-211ENST00000563297 C5orf67F2Z3F1 127 aa17.94■□□□□ 0.46
CLK3-211ENST00000563297 CCNE2O96020 404 aa17.94■□□□□ 0.46
CLK3-211ENST00000563297 RB1P06400 928 aa17.94■□□□□ 0.46
CLK3-211ENST00000563297 FAM86B2P0C5J1 330 aa17.94■□□□□ 0.46
CLK3-211ENST00000563297 BMPR1AP36894 532 aa17.94■□□□□ 0.46
CLK3-211ENST00000563297 APOBRQ0VD83 1088 aa17.94■□□□□ 0.46
CLK3-211ENST00000563297 JAKMIP3Q5VZ66 844 aa17.94■□□□□ 0.46
CLK3-211ENST00000563297 POTEBQ6S5H4 581 aa17.94■□□□□ 0.46
CLK3-211ENST00000563297 ABHD15Q6UXT9 468 aa17.94■□□□□ 0.46
CLK3-211ENST00000563297 NIPA1Q7RTP0 329 aa17.94■□□□□ 0.46
CLK3-211ENST00000563297 CRYGNQ8WXF5 182 aa17.94■□□□□ 0.46
CLK3-211ENST00000563297 C1QTNF1Q9BXJ1 281 aa17.94■□□□□ 0.46
CLK3-211ENST00000563297 CD320Q9NPF0 282 aa17.94■□□□□ 0.46
CLK3-211ENST00000563297 TRPV2Q9Y5S1 764 aa17.94■□□□□ 0.46
CLK3-211ENST00000563297 RALGAPA2Q2PPJ7 1873 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms