RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 ANKRD24Q8TF21 1146 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 SGCDQ92629 289 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 TMEM74Q96NL1 305 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 PIGSQ96S52 555 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 MTFR1LQ9H019 292 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 TAOK3Q9H2K8 898 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 SENP2Q9HC62 589 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 TCP11L1Q9NUJ3 509 aa5.31□□□□□ -1.56
SMG1-207ENST00000563235 C19orf53Q9UNZ5 99 aaPredicted RBP5.31□□□□□ -1.56
SMG1-207ENST00000563235 MCF2LO15068 1137 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 MTSS1O43312 755 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 ADAMTS4O75173 837 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 RTN2O75298 545 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 FERP16591 822 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 PRIM2P49643 509 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 TRDNQ13061 729 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 BECN1Q14457 450 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 CLUL1Q15846 466 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 CCDC38Q502W7 563 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 MCTP1Q6DN14 999 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.3□□□□□ -1.56
SMG1-207ENST00000563235 MTERF4Q7Z6M4 381 aaKnown RBP5.3□□□□□ -1.56
SMG1-207ENST00000563235 NOSTRINQ8IVI9 506 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 OR2C3Q8N628 320 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 CHST13Q8NET6 341 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 DEPTORQ8TB45 409 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 ZSCAN18Q8TBC5 510 aaPredicted RBP5.3□□□□□ -1.56
SMG1-207ENST00000563235 SLC35G2Q8TBE7 412 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 DDX1Q92499 740 aaKnown RBP5.3□□□□□ -1.56
SMG1-207ENST00000563235 MFSD14AQ96MC6 490 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 DDX23Q9BUQ8 820 aaKnown RBP5.3□□□□□ -1.56
SMG1-207ENST00000563235 RSRP1Q9BUV0 290 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 TXLNGYQ9BZA5 131 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 VCPKMTQ9H867 229 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 VPS37BQ9H9H4 285 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 GRHPRQ9UBQ7 328 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 HPCAL4Q9UM19 191 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 ZCCHC11Q5TAX3 1644 aaKnown RBP5.3□□□□□ -1.56
SMG1-207ENST00000563235 POGZQ7Z3K3 1410 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 SLC12A8A0AV02 714 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 ZSCAN5CA6NGD5 496 aaPredicted RBP5.3□□□□□ -1.56
SMG1-207ENST00000563235 M0R2N6 131 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 NMT2O60551 498 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 GREM1O60565 184 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 ZNF254O75437 659 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 EIF6P56537 245 aaKnown RBP5.3□□□□□ -1.56
SMG1-207ENST00000563235 CCNA1P78396 465 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 GRB10Q13322 594 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 ZNF423Q2M1K9 1284 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 ANO4Q32M45 955 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 CCDC122Q5T0U0 273 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 CCDC183Q5T5S1 534 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 GBP6Q6ZN66 633 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 RALYLQ86SE5 291 aaKnown RBP5.3□□□□□ -1.56
SMG1-207ENST00000563235 GALNT7Q86SF2 657 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 CCDC65Q8IXS2 484 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 PLD6Q8N2A8 252 aaKnown RBP5.3□□□□□ -1.56
SMG1-207ENST00000563235 ZBTB38Q8NAP3 1195 aaPredicted RBP5.3□□□□□ -1.56
SMG1-207ENST00000563235 KCNN1Q92952 543 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 ARL8AQ96BM9 186 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 RHOVQ96L33 236 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 ZPBPQ9BS86 351 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 TRIT1Q9H3H1 467 aaKnown RBP5.3□□□□□ -1.56
SMG1-207ENST00000563235 ZWILCHQ9H900 591 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 RTEL1Q9NZ71 1219 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 AIPL1Q9NZN9 384 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 KIAA1468Q9P260 1216 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 EDARQ9UNE0 448 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 JRKLQ9Y4A0 524 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 CCDC69A6NI79 296 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 M0R2C6 588 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 STX6O43752 255 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 PQBP1O60828 265 aaKnown RBP5.3□□□□□ -1.56
SMG1-207ENST00000563235 DNAJC8O75937 253 aaPredicted RBP5.3□□□□□ -1.56
SMG1-207ENST00000563235 STAU1O95793 577 aaKnown RBP5.3□□□□□ -1.56
SMG1-207ENST00000563235 GSK3AP49840 483 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 PMS1P54277 932 aaKnown RBP5.3□□□□□ -1.56
SMG1-207ENST00000563235 AIMP1Q12904 312 aaKnown RBP5.3□□□□□ -1.56
SMG1-207ENST00000563235 MBTPS1Q14703 1052 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 PPP1R7Q15435 360 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 CTC1Q2NKJ3 1217 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 INAVAQ3KP66 663 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 HAUS3Q68CZ6 603 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 ARHGAP11AQ6P4F7 1023 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 RUFY4Q6ZNE9 571 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 EDEM1Q92611 657 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 RRP36Q96EU6 259 aaKnown RBP5.3□□□□□ -1.56
SMG1-207ENST00000563235 CCDC114Q96M63 670 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 RIPOR3Q96MK2 946 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 SEMA4AQ9H3S1 761 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 HOMER3Q9NSC5 361 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 CCDC39Q9UFE4 941 aa5.3□□□□□ -1.56
SMG1-207ENST00000563235 A0A087WV62 115 aa5.29□□□□□ -1.56
SMG1-207ENST00000563235 RIPK2O43353 540 aa5.29□□□□□ -1.56
SMG1-207ENST00000563235 NCK2O43639 380 aa5.29□□□□□ -1.56
SMG1-207ENST00000563235 AP1G1O43747 822 aa5.29□□□□□ -1.56
SMG1-207ENST00000563235 FBXO24O75426 580 aa5.29□□□□□ -1.56
SMG1-207ENST00000563235 HARSP12081 509 aaKnown RBP5.29□□□□□ -1.56
SMG1-207ENST00000563235 TFEBP19484 476 aa5.29□□□□□ -1.56
SMG1-207ENST00000563235 FXR1P51114 621 aaKnown RBP eCLIP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms