RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 ATL3Q6DD88 541 aa18.41■□□□□ 0.54
USB1-206ENST00000562534 PDXDC2PQ6P474 469 aa18.41■□□□□ 0.54
USB1-206ENST00000562534 DTHD1Q6ZMT9 781 aa18.41■□□□□ 0.54
USB1-206ENST00000562534 RAB34Q9BZG1 259 aa18.41■□□□□ 0.54
USB1-206ENST00000562534 RNPEPQ9H4A4 650 aa18.41■□□□□ 0.54
USB1-206ENST00000562534 GABBR1Q9UBS5 961 aa18.41■□□□□ 0.54
USB1-206ENST00000562534 STK24Q9Y6E0 443 aa18.41■□□□□ 0.54
USB1-206ENST00000562534 TLR3O15455 904 aaKnown RBP18.4■□□□□ 0.54
USB1-206ENST00000562534 EVI5O60447 810 aa18.4■□□□□ 0.54
USB1-206ENST00000562534 P4HBP07237 508 aaKnown RBP18.4■□□□□ 0.54
USB1-206ENST00000562534 GNAT1P11488 350 aa18.4■□□□□ 0.54
USB1-206ENST00000562534 FXR2P51116 673 aaKnown RBP eCLIP18.4■□□□□ 0.54
USB1-206ENST00000562534 RTP1P59025 263 aa18.4■□□□□ 0.54
USB1-206ENST00000562534 ATP2C1P98194 919 aaPredicted RBP18.4■□□□□ 0.54
USB1-206ENST00000562534 SPIRE1Q08AE8 756 aa18.4■□□□□ 0.54
USB1-206ENST00000562534 PKP1Q13835 747 aa18.4■□□□□ 0.54
USB1-206ENST00000562534 FAM47CQ5HY64 1035 aa18.4■□□□□ 0.54
USB1-206ENST00000562534 FOXD4L5Q5VV16 416 aaPredicted RBP18.4■□□□□ 0.54
USB1-206ENST00000562534 NCAPH2Q6IBW4 605 aa18.4■□□□□ 0.54
USB1-206ENST00000562534 FAM173BQ6P4H8 233 aa18.4■□□□□ 0.54
USB1-206ENST00000562534 CCDC60Q8IWA6 550 aaPredicted RBP18.4■□□□□ 0.54
USB1-206ENST00000562534 FOXD4L4Q8WXT5 416 aaPredicted RBP18.4■□□□□ 0.54
USB1-206ENST00000562534 ATP6V0A1Q93050 837 aa18.4■□□□□ 0.54
USB1-206ENST00000562534 TSHZ2Q9NRE2 1034 aa18.4■□□□□ 0.54
USB1-206ENST00000562534 NRBP2Q9NSY0 501 aa18.4■□□□□ 0.54
USB1-206ENST00000562534 ATP6V1DQ9Y5K8 247 aa18.4■□□□□ 0.54
USB1-206ENST00000562534 EML1O00423 815 aa18.39■□□□□ 0.53
USB1-206ENST00000562534 PSMC5P62195 406 aa18.39■□□□□ 0.53
USB1-206ENST00000562534 MLLT1Q03111 559 aaPredicted RBP18.39■□□□□ 0.53
USB1-206ENST00000562534 TLE2Q04725 743 aa18.39■□□□□ 0.53
USB1-206ENST00000562534 TRIM50Q86XT4 487 aa18.39■□□□□ 0.53
USB1-206ENST00000562534 CKAP2LQ8IYA6 745 aa18.39■□□□□ 0.53
USB1-206ENST00000562534 HDAC6Q9UBN7 1215 aa18.39■□□□□ 0.53
USB1-206ENST00000562534 ATP11BQ9Y2G3 1177 aa18.39■□□□□ 0.53
USB1-206ENST00000562534 DOCK5Q9H7D0 1870 aa18.39■□□□□ 0.53
USB1-206ENST00000562534 POTEB3A0JP26 581 aa18.38■□□□□ 0.53
USB1-206ENST00000562534 RRN3P2A6NIE6 340 aa18.38■□□□□ 0.53
USB1-206ENST00000562534 HBP1O60381 514 aa18.38■□□□□ 0.53
USB1-206ENST00000562534 MARK3P27448 753 aa18.38■□□□□ 0.53
USB1-206ENST00000562534 QARSP47897 775 aaKnown RBP18.38■□□□□ 0.53
USB1-206ENST00000562534 PLCB4Q15147 1175 aa18.38■□□□□ 0.53
USB1-206ENST00000562534 TRIM60Q495X7 471 aa18.38■□□□□ 0.53
USB1-206ENST00000562534 POTEBQ6S5H4 581 aa18.38■□□□□ 0.53
USB1-206ENST00000562534 ERMNQ8TAM6 284 aa18.38■□□□□ 0.53
USB1-206ENST00000562534 NEK9Q8TD19 979 aa18.38■□□□□ 0.53
USB1-206ENST00000562534 BBXQ8WY36 941 aaPredicted RBP18.38■□□□□ 0.53
USB1-206ENST00000562534 FAM167AQ96KS9 214 aa18.38■□□□□ 0.53
USB1-206ENST00000562534 HSD17B14Q9BPX1 270 aa18.38■□□□□ 0.53
USB1-206ENST00000562534 LRWD1Q9UFC0 647 aa18.38■□□□□ 0.53
USB1-206ENST00000562534 GTF2IRD1Q9UHL9 959 aa18.38■□□□□ 0.53
USB1-206ENST00000562534 CFAP45Q9UL16 551 aa18.38■□□□□ 0.53
USB1-206ENST00000562534 ZDHHC9Q9Y397 364 aa18.38■□□□□ 0.53
USB1-206ENST00000562534 NR2E3Q9Y5X4 410 aa18.38■□□□□ 0.53
USB1-206ENST00000562534 CLIC4Q9Y696 253 aa18.38■□□□□ 0.53
USB1-206ENST00000562534 NRCAMQ92823 1304 aa18.38■□□□□ 0.53
USB1-206ENST00000562534 C17orf102A2RUQ5 167 aa18.37■□□□□ 0.53
USB1-206ENST00000562534 PQBP1O60828 265 aaKnown RBP18.37■□□□□ 0.53
USB1-206ENST00000562534 SLITRK3O94933 977 aa18.37■□□□□ 0.53
USB1-206ENST00000562534 CD4P01730 458 aa18.37■□□□□ 0.53
USB1-206ENST00000562534 SMIM10L2AP0DMW4 78 aa18.37■□□□□ 0.53
USB1-206ENST00000562534 SMIM10L2BP0DMW5 78 aa18.37■□□□□ 0.53
USB1-206ENST00000562534 DDIT3P35638 169 aa18.37■□□□□ 0.53
USB1-206ENST00000562534 FAM126BQ8IXS8 530 aa18.37■□□□□ 0.53
USB1-206ENST00000562534 IGSF22Q8N9C0 903 aa18.37■□□□□ 0.53
USB1-206ENST00000562534 ATP8B4Q8TF62 1192 aa18.37■□□□□ 0.53
USB1-206ENST00000562534 EIF2AK1Q9BQI3 630 aaKnown RBP18.37■□□□□ 0.53
USB1-206ENST00000562534 ZSWIM4Q9H7M6 989 aa18.37■□□□□ 0.53
USB1-206ENST00000562534 TFIP11Q9UBB9 837 aaKnown RBP18.37■□□□□ 0.53
USB1-206ENST00000562534 TRPC6Q9Y210 931 aa18.37■□□□□ 0.53
USB1-206ENST00000562534 INSRRP14616 1297 aa18.36■□□□□ 0.53
USB1-206ENST00000562534 ATP4AP20648 1035 aa18.36■□□□□ 0.53
USB1-206ENST00000562534 BRCA2P51587 3418 aa18.36■□□□□ 0.53
USB1-206ENST00000562534 CEBPZQ03701 1054 aaKnown RBP18.36■□□□□ 0.53
USB1-206ENST00000562534 FAAP100Q0VG06 881 aa18.36■□□□□ 0.53
USB1-206ENST00000562534 SLC39A14Q15043 492 aa18.36■□□□□ 0.53
USB1-206ENST00000562534 PTPAQ15257 358 aa18.36■□□□□ 0.53
USB1-206ENST00000562534 PTGISQ16647 500 aa18.36■□□□□ 0.53
USB1-206ENST00000562534 XKR3Q5GH77 459 aa18.36■□□□□ 0.53
USB1-206ENST00000562534 ZNF484Q5JVG2 852 aa18.36■□□□□ 0.53
USB1-206ENST00000562534 C4orf19Q8IY42 314 aa18.36■□□□□ 0.53
USB1-206ENST00000562534 USP28Q96RU2 1077 aa18.36■□□□□ 0.53
USB1-206ENST00000562534 SETD4Q9NVD3 440 aa18.36■□□□□ 0.53
USB1-206ENST00000562534 CIZ1Q9ULV3 898 aaPredicted RBP18.36■□□□□ 0.53
USB1-206ENST00000562534 NOD1Q9Y239 953 aa18.36■□□□□ 0.53
USB1-206ENST00000562534 MORC2Q9Y6X9 1032 aaPredicted RBP18.36■□□□□ 0.53
USB1-206ENST00000562534 SCN10AQ9Y5Y9 1956 aa18.35■□□□□ 0.53
USB1-206ENST00000562534 IGSF9BQ9UPX0 1349 aa18.35■□□□□ 0.53
USB1-206ENST00000562534 POTEMA6NI47 508 aa18.35■□□□□ 0.53
USB1-206ENST00000562534 B4GALT4O60513 344 aa18.35■□□□□ 0.53
USB1-206ENST00000562534 CLTBP09497 229 aa18.35■□□□□ 0.53
USB1-206ENST00000562534 XRCC6P12956 609 aaKnown RBP eCLIP18.35■□□□□ 0.53
USB1-206ENST00000562534 MUTP22033 750 aa18.35■□□□□ 0.53
USB1-206ENST00000562534 NASPP49321 788 aaPredicted RBP18.35■□□□□ 0.53
USB1-206ENST00000562534 PPFIA1Q13136 1202 aa18.35■□□□□ 0.53
USB1-206ENST00000562534 IL17AQ16552 155 aa18.35■□□□□ 0.53
USB1-206ENST00000562534 GDF6Q6KF10 455 aaPredicted RBP18.35■□□□□ 0.53
USB1-206ENST00000562534 OTUD6AQ7L8S5 288 aa18.35■□□□□ 0.53
USB1-206ENST00000562534 TPH2Q8IWU9 490 aa18.35■□□□□ 0.53
USB1-206ENST00000562534 BANK1Q8NDB2 785 aa18.35■□□□□ 0.53
USB1-206ENST00000562534 DYDC2Q96IM9 177 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms