RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 ACTN1P12814 892 aa12.62□□□□□ -0.39
LPCAT4-202ENST00000562404 ATP4AP20648 1035 aa12.62□□□□□ -0.39
LPCAT4-202ENST00000562404 CIITAP33076 1130 aa12.62□□□□□ -0.39
LPCAT4-202ENST00000562404 WDR5P61964 334 aaKnown RBP12.62□□□□□ -0.39
LPCAT4-202ENST00000562404 ST3GAL1Q11201 340 aa12.62□□□□□ -0.39
LPCAT4-202ENST00000562404 PPFIA1Q13136 1202 aa12.62□□□□□ -0.39
LPCAT4-202ENST00000562404 MKRN4PQ13434 485 aaPredicted RBP12.62□□□□□ -0.39
LPCAT4-202ENST00000562404 PLCB4Q15147 1175 aa12.62□□□□□ -0.39
LPCAT4-202ENST00000562404 GRIK4Q16099 956 aa12.62□□□□□ -0.39
LPCAT4-202ENST00000562404 ME3Q16798 604 aa12.62□□□□□ -0.39
LPCAT4-202ENST00000562404 C8orf34Q49A92 452 aa12.62□□□□□ -0.39
LPCAT4-202ENST00000562404 CNKSR3Q6P9H4 555 aa12.62□□□□□ -0.39
LPCAT4-202ENST00000562404 ABHD15Q6UXT9 468 aa12.62□□□□□ -0.39
LPCAT4-202ENST00000562404 CCDC60Q8IWA6 550 aaPredicted RBP12.62□□□□□ -0.39
LPCAT4-202ENST00000562404 CCDC148Q8NFR7 591 aa12.62□□□□□ -0.39
LPCAT4-202ENST00000562404 DBF4BQ8NFT6 615 aa12.62□□□□□ -0.39
LPCAT4-202ENST00000562404 TRAPPC12Q8WVT3 735 aa12.62□□□□□ -0.39
LPCAT4-202ENST00000562404 GLG1Q92896 1179 aa12.62□□□□□ -0.39
LPCAT4-202ENST00000562404 SDF4Q9BRK5 362 aa12.62□□□□□ -0.39
LPCAT4-202ENST00000562404 SMARCAD1Q9H4L7 1026 aa12.62□□□□□ -0.39
LPCAT4-202ENST00000562404 SH3GLB2Q9NR46 395 aa12.62□□□□□ -0.39
LPCAT4-202ENST00000562404 ERAP1Q9NZ08 941 aa12.62□□□□□ -0.39
LPCAT4-202ENST00000562404 NRCAMQ92823 1304 aa12.62□□□□□ -0.39
LPCAT4-202ENST00000562404 TRANK1O15050 2925 aa12.61□□□□□ -0.39
LPCAT4-202ENST00000562404 MBLAC1A4D2B0 266 aaPredicted RBP12.61□□□□□ -0.39
LPCAT4-202ENST00000562404 IPO5O00410 1097 aaKnown RBP12.61□□□□□ -0.39
LPCAT4-202ENST00000562404 CHRNA1P02708 482 aa12.61□□□□□ -0.39
LPCAT4-202ENST00000562404 FDPSP14324 419 aaKnown RBP12.61□□□□□ -0.39
LPCAT4-202ENST00000562404 INSRRP14616 1297 aa12.61□□□□□ -0.39
LPCAT4-202ENST00000562404 IGBP1P78318 339 aa12.61□□□□□ -0.39
LPCAT4-202ENST00000562404 ADGRE1Q14246 886 aa12.61□□□□□ -0.39
LPCAT4-202ENST00000562404 RAB30Q15771 203 aa12.61□□□□□ -0.39
LPCAT4-202ENST00000562404 PRR16Q569H4 304 aa12.61□□□□□ -0.39
LPCAT4-202ENST00000562404 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.61□□□□□ -0.39
LPCAT4-202ENST00000562404 HERC6Q8IVU3 1022 aa12.61□□□□□ -0.39
LPCAT4-202ENST00000562404 TRIM22Q8IYM9 498 aa12.61□□□□□ -0.39
LPCAT4-202ENST00000562404 TBCKQ8TEA7 893 aa12.61□□□□□ -0.39
LPCAT4-202ENST00000562404 SLC9A7Q96T83 725 aa12.61□□□□□ -0.39
LPCAT4-202ENST00000562404 SLKQ9H2G2 1235 aaPredicted RBP12.61□□□□□ -0.39
LPCAT4-202ENST00000562404 PRDM12Q9H4Q4 367 aa12.61□□□□□ -0.39
LPCAT4-202ENST00000562404 MSRAQ9UJ68 235 aa12.61□□□□□ -0.39
LPCAT4-202ENST00000562404 PCDHA4Q9UN74 947 aa12.61□□□□□ -0.39
LPCAT4-202ENST00000562404 PCDHA11Q9Y5I1 949 aa12.61□□□□□ -0.39
LPCAT4-202ENST00000562404 COL4A4P53420 1690 aaPredicted RBP12.61□□□□□ -0.39
LPCAT4-202ENST00000562404 A0A0C4DFX4 3053 aa12.6□□□□□ -0.39
LPCAT4-202ENST00000562404 LCHNA4D1U4 455 aa12.6□□□□□ -0.39
LPCAT4-202ENST00000562404 EPOPA6NHQ4 379 aa12.6□□□□□ -0.39
LPCAT4-202ENST00000562404 MSH4O15457 936 aa12.6□□□□□ -0.39
LPCAT4-202ENST00000562404 BAIAP3O94812 1187 aa12.6□□□□□ -0.39
LPCAT4-202ENST00000562404 TDP2O95551 362 aa12.6□□□□□ -0.39
LPCAT4-202ENST00000562404 CA3P07451 260 aa12.6□□□□□ -0.39
LPCAT4-202ENST00000562404 GNAT1P11488 350 aa12.6□□□□□ -0.39
LPCAT4-202ENST00000562404 STAT5BP51692 787 aa12.6□□□□□ -0.39
LPCAT4-202ENST00000562404 MGAT3Q09327 533 aa12.6□□□□□ -0.39
LPCAT4-202ENST00000562404 PLEKHG4Q58EX7 1191 aa12.6□□□□□ -0.39
LPCAT4-202ENST00000562404 FAM26DQ5JW98 314 aa12.6□□□□□ -0.39
LPCAT4-202ENST00000562404 PLPPR4Q7Z2D5 763 aa12.6□□□□□ -0.39
LPCAT4-202ENST00000562404 BLIDQ8IZY5 108 aa12.6□□□□□ -0.39
LPCAT4-202ENST00000562404 DAGLBQ8NCG7 672 aa12.6□□□□□ -0.39
LPCAT4-202ENST00000562404 BICD2Q8TD16 824 aa12.6□□□□□ -0.39
LPCAT4-202ENST00000562404 OXER1Q8TDS5 423 aa12.6□□□□□ -0.39
LPCAT4-202ENST00000562404 DNAJB3Q8WWF6 145 aa12.6□□□□□ -0.39
LPCAT4-202ENST00000562404 KIF2CQ99661 725 aa12.6□□□□□ -0.39
LPCAT4-202ENST00000562404 ZNF577Q9BSK1 485 aa12.6□□□□□ -0.39
LPCAT4-202ENST00000562404 PHF20Q9BVI0 1012 aa12.6□□□□□ -0.39
LPCAT4-202ENST00000562404 TUBE1Q9UJT0 475 aa12.6□□□□□ -0.39
LPCAT4-202ENST00000562404 STK36Q9NRP7 1315 aa12.6□□□□□ -0.39
LPCAT4-202ENST00000562404 VCANP13611 3396 aa12.59□□□□□ -0.39
LPCAT4-202ENST00000562404 ZBTB42B2RXF5 422 aa12.59□□□□□ -0.39
LPCAT4-202ENST00000562404 RFXAPO00287 272 aa12.59□□□□□ -0.39
LPCAT4-202ENST00000562404 PARNO95453 639 aaKnown RBP12.59□□□□□ -0.39
LPCAT4-202ENST00000562404 FOSL2P15408 326 aa12.59□□□□□ -0.39
LPCAT4-202ENST00000562404 NEK4P51957 841 aa12.59□□□□□ -0.39
LPCAT4-202ENST00000562404 EARS2Q5JPH6 523 aaKnown RBP12.59□□□□□ -0.39
LPCAT4-202ENST00000562404 PPP2R2DQ66LE6 453 aa12.59□□□□□ -0.39
LPCAT4-202ENST00000562404 MCTP2Q6DN12 878 aa12.59□□□□□ -0.39
LPCAT4-202ENST00000562404 SWSAP1Q6NVH7 229 aa12.59□□□□□ -0.39
LPCAT4-202ENST00000562404 USP38Q8NB14 1042 aa12.59□□□□□ -0.39
LPCAT4-202ENST00000562404 PHOSPHO2Q8TCD6 241 aa12.59□□□□□ -0.39
LPCAT4-202ENST00000562404 GTF3C6Q969F1 213 aa12.59□□□□□ -0.39
LPCAT4-202ENST00000562404 AZI2Q9H6S1 392 aa12.59□□□□□ -0.39
LPCAT4-202ENST00000562404 CERS4Q9HA82 394 aa12.59□□□□□ -0.39
LPCAT4-202ENST00000562404 SLC28A3Q9HAS3 691 aa12.59□□□□□ -0.39
LPCAT4-202ENST00000562404 PRRC2BQ5JSZ5 2229 aaKnown RBP12.59□□□□□ -0.39
LPCAT4-202ENST00000562404 NLRC5Q86WI3 1866 aa12.59□□□□□ -0.39
LPCAT4-202ENST00000562404 ABHD14A-ACY1A0A1B0GW23 586 aa12.58□□□□□ -0.4
LPCAT4-202ENST00000562404 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.58□□□□□ -0.4
LPCAT4-202ENST00000562404 POTEB3A0JP26 581 aa12.58□□□□□ -0.4
LPCAT4-202ENST00000562404 FAM205CA6NFA0 338 aa12.58□□□□□ -0.4
LPCAT4-202ENST00000562404 JAK2O60674 1132 aa12.58□□□□□ -0.4
LPCAT4-202ENST00000562404 CAND2O75155 1236 aa12.58□□□□□ -0.4
LPCAT4-202ENST00000562404 USP11P51784 963 aa12.58□□□□□ -0.4
LPCAT4-202ENST00000562404 SETQ01105 290 aaPredicted RBP12.58□□□□□ -0.4
LPCAT4-202ENST00000562404 TAP1Q03518 808 aa12.58□□□□□ -0.4
LPCAT4-202ENST00000562404 TMEM62Q0P6H9 643 aa12.58□□□□□ -0.4
LPCAT4-202ENST00000562404 INF2Q27J81 1249 aa12.58□□□□□ -0.4
LPCAT4-202ENST00000562404 FAM117BQ6P1L5 589 aa12.58□□□□□ -0.4
LPCAT4-202ENST00000562404 CPLX2Q6PUV4 134 aaKnown RBP12.58□□□□□ -0.4
LPCAT4-202ENST00000562404 POTEBQ6S5H4 581 aa12.58□□□□□ -0.4
LPCAT4-202ENST00000562404 RPAINQ86UA6 219 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms