RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 TRANK1O15050 2925 aa9.44□□□□□ -0.9
GINS3-204ENST00000561952 NLRC5Q86WI3 1866 aa9.43□□□□□ -0.9
GINS3-204ENST00000561952 POTEB3A0JP26 581 aa9.43□□□□□ -0.9
GINS3-204ENST00000561952 GTPBP6O43824 516 aaPredicted RBP9.43□□□□□ -0.9
GINS3-204ENST00000561952 UPP2O95045 317 aa9.43□□□□□ -0.9
GINS3-204ENST00000561952 NEFLP07196 543 aa9.43□□□□□ -0.9
GINS3-204ENST00000561952 ADD1P35611 737 aaKnown RBP9.43□□□□□ -0.9
GINS3-204ENST00000561952 ZNF76P36508 570 aa9.43□□□□□ -0.9
GINS3-204ENST00000561952 RBL2Q08999 1139 aa9.43□□□□□ -0.9
GINS3-204ENST00000561952 FUT2Q10981 343 aa9.43□□□□□ -0.9
GINS3-204ENST00000561952 PPFIA1Q13136 1202 aa9.43□□□□□ -0.9
GINS3-204ENST00000561952 IKBKEQ14164 716 aa9.43□□□□□ -0.9
GINS3-204ENST00000561952 JAKMIP3Q5VZ66 844 aa9.43□□□□□ -0.9
GINS3-204ENST00000561952 XRRA1Q6P2D8 792 aa9.43□□□□□ -0.9
GINS3-204ENST00000561952 POTEBQ6S5H4 581 aa9.43□□□□□ -0.9
GINS3-204ENST00000561952 RUFY4Q6ZNE9 571 aa9.43□□□□□ -0.9
GINS3-204ENST00000561952 GIMAP8Q8ND71 665 aaPredicted RBP9.43□□□□□ -0.9
GINS3-204ENST00000561952 PHOSPHO2Q8TCD6 241 aa9.43□□□□□ -0.9
GINS3-204ENST00000561952 GDPD5Q8WTR4 605 aa9.43□□□□□ -0.9
GINS3-204ENST00000561952 PHKBQ93100 1093 aa9.43□□□□□ -0.9
GINS3-204ENST00000561952 CDHR1Q96JP9 859 aa9.43□□□□□ -0.9
GINS3-204ENST00000561952 SENP7Q9BQF6 1050 aa9.43□□□□□ -0.9
GINS3-204ENST00000561952 JPH1Q9HDC5 661 aaPredicted RBP9.43□□□□□ -0.9
GINS3-204ENST00000561952 RIC8AQ9NPQ8 531 aa9.43□□□□□ -0.9
GINS3-204ENST00000561952 JADE2Q9NQC1 790 aa9.43□□□□□ -0.9
GINS3-204ENST00000561952 FAM217BQ9NTX9 383 aaPredicted RBP9.43□□□□□ -0.9
GINS3-204ENST00000561952 THEGQ9P2T0 379 aa9.43□□□□□ -0.9
GINS3-204ENST00000561952 UBIAD1Q9Y5Z9 338 aa9.43□□□□□ -0.9
GINS3-204ENST00000561952 EMSYQ7Z589 1322 aa9.42□□□□□ -0.9
GINS3-204ENST00000561952 ABHD14A-ACY1A0A1B0GW23 586 aa9.42□□□□□ -0.9
GINS3-204ENST00000561952 GSTTP1A0A1W2PQM5 241 aa9.42□□□□□ -0.9
GINS3-204ENST00000561952 ADAMTS3O15072 1205 aa9.42□□□□□ -0.9
GINS3-204ENST00000561952 PARNO95453 639 aaKnown RBP9.42□□□□□ -0.9
GINS3-204ENST00000561952 HMGB1P09429 215 aaKnown RBP9.42□□□□□ -0.9
GINS3-204ENST00000561952 ARP10275 920 aa9.42□□□□□ -0.9
GINS3-204ENST00000561952 GHRP10912 638 aa9.42□□□□□ -0.9
GINS3-204ENST00000561952 GNAT1P11488 350 aa9.42□□□□□ -0.9
GINS3-204ENST00000561952 IBSPP21815 317 aaPredicted RBP9.42□□□□□ -0.9
GINS3-204ENST00000561952 HSPA4P34932 840 aa9.42□□□□□ -0.9
GINS3-204ENST00000561952 CCT2P78371 535 aaKnown RBP9.42□□□□□ -0.9
GINS3-204ENST00000561952 GRIK4Q16099 956 aa9.42□□□□□ -0.9
GINS3-204ENST00000561952 TSGA10IPQ3SY00 556 aa9.42□□□□□ -0.9
GINS3-204ENST00000561952 PPP1R18Q6NYC8 613 aa9.42□□□□□ -0.9
GINS3-204ENST00000561952 RASGRP4Q8TDF6 673 aa9.42□□□□□ -0.9
GINS3-204ENST00000561952 TRAPPC12Q8WVT3 735 aa9.42□□□□□ -0.9
GINS3-204ENST00000561952 SEPT1Q8WYJ6 367 aa9.42□□□□□ -0.9
GINS3-204ENST00000561952 MXRA8Q9BRK3 442 aa9.42□□□□□ -0.9
GINS3-204ENST00000561952 SDF4Q9BRK5 362 aa9.42□□□□□ -0.9
GINS3-204ENST00000561952 LARP6Q9BRS8 491 aaKnown RBP9.42□□□□□ -0.9
GINS3-204ENST00000561952 FAM49AQ9H0Q0 323 aaPredicted RBP9.42□□□□□ -0.9
GINS3-204ENST00000561952 KCNH7Q9NS40 1196 aa9.42□□□□□ -0.9
GINS3-204ENST00000561952 BARHL2Q9NY43 387 aa9.42□□□□□ -0.9
GINS3-204ENST00000561952 SLC9A2Q9UBY0 812 aa9.42□□□□□ -0.9
GINS3-204ENST00000561952 MYH9P35579 1960 aaKnown RBP9.41□□□□□ -0.9
GINS3-204ENST00000561952 CSPG5O95196 566 aa9.41□□□□□ -0.9
GINS3-204ENST00000561952 GJB5O95377 273 aa9.41□□□□□ -0.9
GINS3-204ENST00000561952 AMHP03971 560 aa9.41□□□□□ -0.9
GINS3-204ENST00000561952 SCG2P13521 617 aa9.41□□□□□ -0.9
GINS3-204ENST00000561952 RPS6KB1P23443 525 aa9.41□□□□□ -0.9
GINS3-204ENST00000561952 HOXC8P31273 242 aa9.41□□□□□ -0.9
GINS3-204ENST00000561952 AKAP17AQ02040 695 aaKnown RBP9.41□□□□□ -0.9
GINS3-204ENST00000561952 TFF2Q03403 129 aa9.41□□□□□ -0.9
GINS3-204ENST00000561952 TMEM62Q0P6H9 643 aa9.41□□□□□ -0.9
GINS3-204ENST00000561952 GRB10Q13322 594 aa9.41□□□□□ -0.9
GINS3-204ENST00000561952 PLEKHG4Q58EX7 1191 aa9.41□□□□□ -0.9
GINS3-204ENST00000561952 TJAP1Q5JTD0 557 aa9.41□□□□□ -0.9
GINS3-204ENST00000561952 TRMT1LQ7Z2T5 733 aaKnown RBP9.41□□□□□ -0.9
GINS3-204ENST00000561952 IL27Q8NEV9 243 aa9.41□□□□□ -0.9
GINS3-204ENST00000561952 DNAJB3Q8WWF6 145 aa9.41□□□□□ -0.9
GINS3-204ENST00000561952 SEPT8Q92599 483 aa9.41□□□□□ -0.9
GINS3-204ENST00000561952 SLC26A6Q9BXS9 759 aa9.41□□□□□ -0.9
GINS3-204ENST00000561952 AZI2Q9H6S1 392 aa9.41□□□□□ -0.9
GINS3-204ENST00000561952 NCOA5Q9HCD5 579 aaKnown RBP9.41□□□□□ -0.9
GINS3-204ENST00000561952 ERAP1Q9NZ08 941 aa9.41□□□□□ -0.9
GINS3-204ENST00000561952 TUBE1Q9UJT0 475 aa9.41□□□□□ -0.9
GINS3-204ENST00000561952 MTCH2Q9Y6C9 303 aa9.41□□□□□ -0.9
GINS3-204ENST00000561952 EVPLQ92817 2033 aa9.41□□□□□ -0.9
GINS3-204ENST00000561952 WDR81Q562E7 1941 aa9.41□□□□□ -0.9
GINS3-204ENST00000561952 NRCAMQ92823 1304 aa9.4□□□□□ -0.9
GINS3-204ENST00000561952 CCDC196A0A1B0GTZ2 297 aa9.4□□□□□ -0.9
GINS3-204ENST00000561952 LINC01553A4QN01 128 aa9.4□□□□□ -0.9
GINS3-204ENST00000561952 BACH1O14867 736 aa9.4□□□□□ -0.9
GINS3-204ENST00000561952 EFCAB14O75071 495 aa9.4□□□□□ -0.9
GINS3-204ENST00000561952 REC8O95072 547 aa9.4□□□□□ -0.9
GINS3-204ENST00000561952 CHRM1P11229 460 aaPredicted RBP9.4□□□□□ -0.9
GINS3-204ENST00000561952 SREBF1P36956 1147 aa9.4□□□□□ -0.9
GINS3-204ENST00000561952 ACTR2P61160 394 aa9.4□□□□□ -0.9
GINS3-204ENST00000561952 STK3Q13188 491 aa9.4□□□□□ -0.9
GINS3-204ENST00000561952 ITGB3BPQ13352 177 aaPredicted RBP9.4□□□□□ -0.9
GINS3-204ENST00000561952 AP3B2Q13367 1082 aa9.4□□□□□ -0.9
GINS3-204ENST00000561952 PFKFB3Q16875 520 aaPredicted RBP9.4□□□□□ -0.9
GINS3-204ENST00000561952 CEP55Q53EZ4 464 aa9.4□□□□□ -0.9
GINS3-204ENST00000561952 PLA2G4DQ86XP0 818 aa9.4□□□□□ -0.9
GINS3-204ENST00000561952 YME1L1Q96TA2 773 aa9.4□□□□□ -0.9
GINS3-204ENST00000561952 PCYT2Q99447 389 aa9.4□□□□□ -0.9
GINS3-204ENST00000561952 RAD9AQ99638 391 aa9.4□□□□□ -0.9
GINS3-204ENST00000561952 C17orf80Q9BSJ5 609 aa9.4□□□□□ -0.9
GINS3-204ENST00000561952 IFIH1Q9BYX4 1025 aaKnown RBP9.4□□□□□ -0.9
GINS3-204ENST00000561952 SMARCAD1Q9H4L7 1026 aa9.4□□□□□ -0.9
GINS3-204ENST00000561952 AGO4Q9HCK5 861 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms