RNA–Protein interactions for RNA: ENST00000561728.1

AC010542.3-202, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC010542.3, Length 701 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC010542.3-202ENST00000561728 PTPN14Q15678 1187 aa11.32□□□□□ -0.6
AC010542.3-202ENST00000561728 SPATA18Q8TC71 538 aa11.32□□□□□ -0.6
AC010542.3-202ENST00000561728 RSAD2Q8WXG1 361 aa11.32□□□□□ -0.6
AC010542.3-202ENST00000561728 MPHOSPH6Q99547 160 aaKnown RBP11.32□□□□□ -0.6
AC010542.3-202ENST00000561728 CLMPQ9H6B4 373 aa11.32□□□□□ -0.6
AC010542.3-202ENST00000561728 NGRNQ9NPE2 291 aaKnown RBP11.32□□□□□ -0.6
AC010542.3-202ENST00000561728 DZANK1Q9NVP4 752 aa11.32□□□□□ -0.6
AC010542.3-202ENST00000561728 PUF60Q9UHX1 559 aaKnown RBP11.32□□□□□ -0.6
AC010542.3-202ENST00000561728 FEM1BQ9UK73 627 aa11.32□□□□□ -0.6
AC010542.3-202ENST00000561728 NEUROG3Q9Y4Z2 214 aa11.32□□□□□ -0.6
AC010542.3-202ENST00000561728 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.31□□□□□ -0.6
AC010542.3-202ENST00000561728 KANSL1LA0AUZ9 987 aa11.31□□□□□ -0.6
AC010542.3-202ENST00000561728 ENPP3O14638 875 aa11.31□□□□□ -0.6
AC010542.3-202ENST00000561728 GIPC1O14908 333 aa11.31□□□□□ -0.6
AC010542.3-202ENST00000561728 STARD6P59095 220 aa11.31□□□□□ -0.6
AC010542.3-202ENST00000561728 TROAPQ12815 778 aa11.31□□□□□ -0.6
AC010542.3-202ENST00000561728 SIM2Q14190 667 aaPredicted RBP11.31□□□□□ -0.6
AC010542.3-202ENST00000561728 UBXN2BQ14CS0 331 aa11.31□□□□□ -0.6
AC010542.3-202ENST00000561728 CHST3Q7LGC8 479 aa11.31□□□□□ -0.6
AC010542.3-202ENST00000561728 SLC44A3Q8N4M1 653 aa11.31□□□□□ -0.6
AC010542.3-202ENST00000561728 ATP6V0A1Q93050 837 aa11.31□□□□□ -0.6
AC010542.3-202ENST00000561728 DYNLL2Q96FJ2 89 aa11.31□□□□□ -0.6
AC010542.3-202ENST00000561728 ZFP91Q96JP5 570 aaPredicted RBP11.31□□□□□ -0.6
AC010542.3-202ENST00000561728 MKNK1Q9BUB5 465 aa11.31□□□□□ -0.6
AC010542.3-202ENST00000561728 FRMPD2Q68DX3 1309 aaPredicted RBP11.31□□□□□ -0.6
AC010542.3-202ENST00000561728 DENND4AQ7Z401 1863 aa11.3□□□□□ -0.6
AC010542.3-202ENST00000561728 F5H6K3 240 aa11.3□□□□□ -0.6
AC010542.3-202ENST00000561728 VAMP4O75379 141 aa11.3□□□□□ -0.6
AC010542.3-202ENST00000561728 C1QL1O75973 258 aa11.3□□□□□ -0.6
AC010542.3-202ENST00000561728 NDUFB10O96000 172 aa11.3□□□□□ -0.6
AC010542.3-202ENST00000561728 GH1P01241 217 aa11.3□□□□□ -0.6
AC010542.3-202ENST00000561728 ZNF286BP0CG31 522 aa11.3□□□□□ -0.6
AC010542.3-202ENST00000561728 KLRC3Q07444 240 aa11.3□□□□□ -0.6
AC010542.3-202ENST00000561728 SRSF1Q07955 248 aaKnown RBP eCLIP11.3□□□□□ -0.6
AC010542.3-202ENST00000561728 TFCP2Q12800 502 aa11.3□□□□□ -0.6
AC010542.3-202ENST00000561728 SF3A2Q15428 464 aaKnown RBP11.3□□□□□ -0.6
AC010542.3-202ENST00000561728 HNRNPLLQ8WVV9 542 aaKnown RBP11.3□□□□□ -0.6
AC010542.3-202ENST00000561728 PRMT8Q9NR22 394 aaPredicted RBP11.3□□□□□ -0.6
AC010542.3-202ENST00000561728 MSRB2Q9Y3D2 182 aa11.3□□□□□ -0.6
AC010542.3-202ENST00000561728 TICRRQ7Z2Z1 1910 aa11.29□□□□□ -0.6
AC010542.3-202ENST00000561728 C17orf102A2RUQ5 167 aa11.29□□□□□ -0.6
AC010542.3-202ENST00000561728 TK2O00142 265 aa11.29□□□□□ -0.6
AC010542.3-202ENST00000561728 ARIH2O95376 493 aa11.29□□□□□ -0.6
AC010542.3-202ENST00000561728 F2P00734 622 aa11.29□□□□□ -0.6
AC010542.3-202ENST00000561728 STAG3L1P0CL83 205 aa11.29□□□□□ -0.6
AC010542.3-202ENST00000561728 HIC1Q14526 733 aa11.29□□□□□ -0.6
AC010542.3-202ENST00000561728 MUM1L1Q5H9M0 696 aa11.29□□□□□ -0.6
AC010542.3-202ENST00000561728 KANK3Q6NY19 840 aa11.29□□□□□ -0.6
AC010542.3-202ENST00000561728 RASGRP2Q7LDG7 609 aa11.29□□□□□ -0.6
AC010542.3-202ENST00000561728 NPAS4Q8IUM7 802 aa11.29□□□□□ -0.6
AC010542.3-202ENST00000561728 SLC39A7Q92504 469 aa11.29□□□□□ -0.6
AC010542.3-202ENST00000561728 KLHL5Q96PQ7 755 aa11.29□□□□□ -0.6
AC010542.3-202ENST00000561728 ISY1Q9ULR0 285 aaKnown RBP11.29□□□□□ -0.6
AC010542.3-202ENST00000561728 LZTS1Q9Y250 596 aa11.29□□□□□ -0.6
AC010542.3-202ENST00000561728 FAM170BA6NMN3 283 aa11.28□□□□□ -0.6
AC010542.3-202ENST00000561728 HAS3O00219 553 aa11.28□□□□□ -0.6
AC010542.3-202ENST00000561728 IDH1O75874 414 aaKnown RBP11.28□□□□□ -0.6
AC010542.3-202ENST00000561728 CYP2D6P10635 497 aa11.28□□□□□ -0.6
AC010542.3-202ENST00000561728 GHRP10912 638 aa11.28□□□□□ -0.6
AC010542.3-202ENST00000561728 GBP2P32456 591 aaPredicted RBP11.28□□□□□ -0.6
AC010542.3-202ENST00000561728 CA8P35219 290 aa11.28□□□□□ -0.6
AC010542.3-202ENST00000561728 PPP2R5DQ14738 602 aa11.28□□□□□ -0.6
AC010542.3-202ENST00000561728 KIAA1211LQ6NV74 962 aa11.28□□□□□ -0.6
AC010542.3-202ENST00000561728 TMC5Q6UXY8 1006 aa11.28□□□□□ -0.6
AC010542.3-202ENST00000561728 TMC7Q7Z402 723 aa11.28□□□□□ -0.6
AC010542.3-202ENST00000561728 MRPS27Q92552 414 aaKnown RBP11.28□□□□□ -0.6
AC010542.3-202ENST00000561728 NXPE3Q969Y0 559 aa11.28□□□□□ -0.6
AC010542.3-202ENST00000561728 UBL7Q96S82 380 aaPredicted RBP11.28□□□□□ -0.6
AC010542.3-202ENST00000561728 OSBPL6Q9BZF3 934 aa11.28□□□□□ -0.6
AC010542.3-202ENST00000561728 USP44Q9H0E7 712 aa11.28□□□□□ -0.6
AC010542.3-202ENST00000561728 BCAS3Q9H6U6 928 aa11.28□□□□□ -0.6
AC010542.3-202ENST00000561728 STK24Q9Y6E0 443 aa11.28□□□□□ -0.6
AC010542.3-202ENST00000561728 LCTP09848 1927 aa11.28□□□□□ -0.6
AC010542.3-202ENST00000561728 ACACAQ13085 2346 aa11.27□□□□□ -0.6
AC010542.3-202ENST00000561728 HYAL3O43820 417 aaPredicted RBP11.27□□□□□ -0.61
AC010542.3-202ENST00000561728 ARHGAP1Q07960 439 aa11.27□□□□□ -0.61
AC010542.3-202ENST00000561728 TTC39AQ5SRH9 613 aa11.27□□□□□ -0.61
AC010542.3-202ENST00000561728 RNF43Q68DV7 783 aa11.27□□□□□ -0.61
AC010542.3-202ENST00000561728 TMEM87AQ8NBN3 555 aa11.27□□□□□ -0.61
AC010542.3-202ENST00000561728 PCGF6Q9BYE7 350 aa11.27□□□□□ -0.61
AC010542.3-202ENST00000561728 CRNKL1Q9BZJ0 848 aaKnown RBP11.27□□□□□ -0.61
AC010542.3-202ENST00000561728 COPRSQ9NQ92 184 aa11.27□□□□□ -0.61
AC010542.3-202ENST00000561728 PIH1D3Q9NQM4 214 aaKnown RBP11.27□□□□□ -0.61
AC010542.3-202ENST00000561728 SLC2A4RGQ9NR83 387 aa11.27□□□□□ -0.61
AC010542.3-202ENST00000561728 CLASP2O75122 1294 aaKnown RBP11.26□□□□□ -0.61
AC010542.3-202ENST00000561728 ZNF806P0C7X5 589 aa11.26□□□□□ -0.61
AC010542.3-202ENST00000561728 CDK8P49336 464 aa11.26□□□□□ -0.61
AC010542.3-202ENST00000561728 GATMP50440 423 aa11.26□□□□□ -0.61
AC010542.3-202ENST00000561728 IKQ13123 557 aaPredicted RBP11.26□□□□□ -0.61
AC010542.3-202ENST00000561728 BAATQ14032 418 aaPredicted RBP11.26□□□□□ -0.61
AC010542.3-202ENST00000561728 SMC1AQ14683 1233 aaKnown RBP11.26□□□□□ -0.61
AC010542.3-202ENST00000561728 LETM2Q2VYF4 491 aa11.26□□□□□ -0.61
AC010542.3-202ENST00000561728 SH3PXD2AQ5TCZ1 1133 aa11.26□□□□□ -0.61
AC010542.3-202ENST00000561728 CABP7Q86V35 215 aa11.26□□□□□ -0.61
AC010542.3-202ENST00000561728 COLGALT1Q8NBJ5 622 aa11.26□□□□□ -0.61
AC010542.3-202ENST00000561728 LRFN2Q9ULH4 789 aa11.26□□□□□ -0.61
AC010542.3-202ENST00000561728 MTF2Q9Y483 593 aaPredicted RBP11.26□□□□□ -0.61
AC010542.3-202ENST00000561728 GREB1Q4ZG55 1949 aa11.26□□□□□ -0.61
AC010542.3-202ENST00000561728 CELSR3Q9NYQ7 3312 aa11.25□□□□□ -0.61
AC010542.3-202ENST00000561728 MYO5AQ9Y4I1 1855 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms