RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 GPS2Q13227 327 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 PABPC4Q13310 644 aaKnown RBP eCLIP11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 FAM26FQ5R3K3 315 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 LRCH2Q5VUJ6 765 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 PCNX4Q63HM2 1172 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 EPM2AIP1Q7L775 607 aaPredicted RBP11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 MCF2L2Q86YR7 1114 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 REXO1L1PQ8IX06 675 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 ZC3H3Q8IXZ2 948 aaKnown RBP11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 SAMD3Q8N6K7 520 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 GOLGA6L1Q8N7Z2 621 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 MB21D1Q8N884 522 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 CCDC47Q96A33 483 aaKnown RBP11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 DYDC2Q96IM9 177 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 PPP1R13BQ96KQ4 1090 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 PANX2Q96RD6 677 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 RUSC1Q9BVN2 902 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 KCTD10Q9H3F6 313 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 AS3MTQ9HBK9 375 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 PICK1Q9NRD5 415 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 PANK4Q9NVE7 773 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 MAP3K20Q9NYL2 800 aaKnown RBP11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 RNF181Q9P0P0 153 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 CEP83Q9Y592 693 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 COL11A1P12107 1806 aaPredicted RBP11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 A0A1W2PQC6 194 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 C19orf81C9J6K1 198 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 ZBTB39O15060 712 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 EYA4O95677 639 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 FDX1P10109 184 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 IDEP14735 1019 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 CASP5P51878 434 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 SETQ01105 290 aaPredicted RBP11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 VGLL4Q14135 290 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 TMEM132BQ14DG7 1078 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 ERCC6LQ2NKX8 1250 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 TKFCQ3LXA3 575 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 KCTD17Q8N5Z5 321 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 ERMNQ8TAM6 284 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 SCFD1Q8WVM8 642 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 CNOT6LQ96LI5 555 aaKnown RBP11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 RIT2Q99578 217 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 REEP2Q9BRK0 252 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 WDR11Q9BZH6 1224 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 TTYH3Q9C0H2 523 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 TUFT1Q9NNX1 390 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 KCNH7Q9NS40 1196 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 TRMT1Q9NXH9 659 aaKnown RBP11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 STK24Q9Y6E0 443 aa11.33□□□□□ -0.6
TUBGCP4-202ENST00000561691 AKR1B15C9JRZ8 316 aaPredicted RBP11.32□□□□□ -0.6
TUBGCP4-202ENST00000561691 IPO5O00410 1097 aaKnown RBP11.32□□□□□ -0.6
TUBGCP4-202ENST00000561691 FANCGO15287 622 aa11.32□□□□□ -0.6
TUBGCP4-202ENST00000561691 POLR3GO15318 223 aaPredicted RBP11.32□□□□□ -0.6
TUBGCP4-202ENST00000561691 ZBED4O75132 1171 aa11.32□□□□□ -0.6
TUBGCP4-202ENST00000561691 SSBP05455 408 aaKnown RBP eCLIP11.32□□□□□ -0.6
TUBGCP4-202ENST00000561691 CASP14P31944 242 aa11.32□□□□□ -0.6
TUBGCP4-202ENST00000561691 CTTNQ14247 550 aaKnown RBP11.32□□□□□ -0.6
TUBGCP4-202ENST00000561691 PGM5Q15124 567 aa11.32□□□□□ -0.6
TUBGCP4-202ENST00000561691 SUPT20HL1Q3ZLR7 823 aa11.32□□□□□ -0.6
TUBGCP4-202ENST00000561691 FILIP1LQ4L180 1135 aa11.32□□□□□ -0.6
TUBGCP4-202ENST00000561691 C9orf131Q5VYM1 1079 aa11.32□□□□□ -0.6
TUBGCP4-202ENST00000561691 C1orf186Q6ZWK4 172 aa11.32□□□□□ -0.6
TUBGCP4-202ENST00000561691 PDCD2LQ9BRP1 358 aa11.32□□□□□ -0.6
TUBGCP4-202ENST00000561691 ZNF577Q9BSK1 485 aa11.32□□□□□ -0.6
TUBGCP4-202ENST00000561691 BHMT2Q9H2M3 363 aa11.32□□□□□ -0.6
TUBGCP4-202ENST00000561691 EHMT1Q9H9B1 1298 aa11.32□□□□□ -0.6
TUBGCP4-202ENST00000561691 AGO4Q9HCK5 861 aaKnown RBP11.32□□□□□ -0.6
TUBGCP4-202ENST00000561691 JADE2Q9NQC1 790 aa11.32□□□□□ -0.6
TUBGCP4-202ENST00000561691 HOMER2Q9NSB8 354 aa11.32□□□□□ -0.6
TUBGCP4-202ENST00000561691 DNM3Q9UQ16 869 aa11.32□□□□□ -0.6
TUBGCP4-202ENST00000561691 RABGAP1Q9Y3P9 1069 aa11.32□□□□□ -0.6
TUBGCP4-202ENST00000561691 PTPRFP10586 1907 aa11.31□□□□□ -0.6
TUBGCP4-202ENST00000561691 A0A0G2JMZ2 1700 aa11.31□□□□□ -0.6
TUBGCP4-202ENST00000561691 SPDYE16A6NNV3 312 aaPredicted RBP11.31□□□□□ -0.6
TUBGCP4-202ENST00000561691 RSPH10B2B2RC85 870 aa11.31□□□□□ -0.6
TUBGCP4-202ENST00000561691 ARHGAP6O43182 974 aa11.31□□□□□ -0.6
TUBGCP4-202ENST00000561691 STX10O60499 249 aa11.31□□□□□ -0.6
TUBGCP4-202ENST00000561691 CCDC172P0C7W6 258 aa11.31□□□□□ -0.6
TUBGCP4-202ENST00000561691 RSPH10BP0C881 870 aa11.31□□□□□ -0.6
TUBGCP4-202ENST00000561691 MUTP22033 750 aa11.31□□□□□ -0.6
TUBGCP4-202ENST00000561691 OAZ1P54368 228 aa11.31□□□□□ -0.6
TUBGCP4-202ENST00000561691 LRRC63Q05C16 580 aa11.31□□□□□ -0.6
TUBGCP4-202ENST00000561691 MTF1Q14872 753 aa11.31□□□□□ -0.6
TUBGCP4-202ENST00000561691 EPHA7Q15375 998 aa11.31□□□□□ -0.6
TUBGCP4-202ENST00000561691 TTC31Q49AM3 519 aaPredicted RBP11.31□□□□□ -0.6
TUBGCP4-202ENST00000561691 RINT1Q6NUQ1 792 aa11.31□□□□□ -0.6
TUBGCP4-202ENST00000561691 RAD9BQ6WBX8 426 aa11.31□□□□□ -0.6
TUBGCP4-202ENST00000561691 PACS2Q86VP3 889 aa11.31□□□□□ -0.6
TUBGCP4-202ENST00000561691 BANK1Q8NDB2 785 aa11.31□□□□□ -0.6
TUBGCP4-202ENST00000561691 L3MBTL3Q96JM7 780 aaPredicted RBP11.31□□□□□ -0.6
TUBGCP4-202ENST00000561691 FIZ1Q96SL8 496 aa11.31□□□□□ -0.6
TUBGCP4-202ENST00000561691 BAG1Q99933 345 aaPredicted RBP11.31□□□□□ -0.6
TUBGCP4-202ENST00000561691 TUBGCP2Q9BSJ2 902 aa11.31□□□□□ -0.6
TUBGCP4-202ENST00000561691 PXMP2Q9NR77 195 aa11.31□□□□□ -0.6
TUBGCP4-202ENST00000561691 RNF146Q9NTX7 359 aa11.31□□□□□ -0.6
TUBGCP4-202ENST00000561691 LCTP09848 1927 aa11.31□□□□□ -0.6
TUBGCP4-202ENST00000561691 DCAF8L1A6NGE4 600 aa11.31□□□□□ -0.6
TUBGCP4-202ENST00000561691 B4DLN1 442 aa11.31□□□□□ -0.6
TUBGCP4-202ENST00000561691 CHMP2AO43633 222 aa11.31□□□□□ -0.6
TUBGCP4-202ENST00000561691 GAS7O60861 476 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms