RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 GRIK4Q16099 956 aa27.05■■□□□ 1.92
CDR2-202ENST00000561630 CNKSR3Q6P9H4 555 aa27.05■■□□□ 1.92
CDR2-202ENST00000561630 ABHD15Q6UXT9 468 aa27.05■■□□□ 1.92
CDR2-202ENST00000561630 PHOSPHO2Q8TCD6 241 aa27.05■■□□□ 1.92
CDR2-202ENST00000561630 TBCKQ8TEA7 893 aa27.05■■□□□ 1.92
CDR2-202ENST00000561630 ZNF576Q9H609 170 aa27.05■■□□□ 1.92
CDR2-202ENST00000561630 NECAB1Q8N987 351 aa27.04■■□□□ 1.92
CDR2-202ENST00000561630 TNPO1Q92973 898 aaKnown RBP27.04■■□□□ 1.92
CDR2-202ENST00000561630 GTF3C6Q969F1 213 aa27.04■■□□□ 1.92
CDR2-202ENST00000561630 UIMC1Q96RL1 719 aa27.04■■□□□ 1.92
CDR2-202ENST00000561630 SLC9A7Q96T83 725 aa27.04■■□□□ 1.92
CDR2-202ENST00000561630 MBLAC1A4D2B0 266 aaPredicted RBP27.03■■□□□ 1.92
CDR2-202ENST00000561630 LARGE1O95461 756 aa27.03■■□□□ 1.92
CDR2-202ENST00000561630 INSRRP14616 1297 aa27.03■■□□□ 1.92
CDR2-202ENST00000561630 SLC26A2P50443 739 aa27.03■■□□□ 1.92
CDR2-202ENST00000561630 RABGGTBP53611 331 aa27.03■■□□□ 1.92
CDR2-202ENST00000561630 PLCB4Q15147 1175 aa27.03■■□□□ 1.92
CDR2-202ENST00000561630 MARCH8Q5T0T0 291 aa27.03■■□□□ 1.92
CDR2-202ENST00000561630 TAF2Q6P1X5 1199 aa27.03■■□□□ 1.92
CDR2-202ENST00000561630 RPAINQ86UA6 219 aa27.03■■□□□ 1.92
CDR2-202ENST00000561630 PHF20Q9BVI0 1012 aa27.03■■□□□ 1.92
CDR2-202ENST00000561630 ORC3Q9UBD5 711 aaPredicted RBP27.03■■□□□ 1.92
CDR2-202ENST00000561630 TUBE1Q9UJT0 475 aa27.03■■□□□ 1.92
CDR2-202ENST00000561630 KCNJ14Q9UNX9 436 aa27.03■■□□□ 1.92
CDR2-202ENST00000561630 YBX2Q9Y2T7 364 aaKnown RBP27.03■■□□□ 1.92
CDR2-202ENST00000561630 PCDHA11Q9Y5I1 949 aa27.03■■□□□ 1.92
CDR2-202ENST00000561630 TRIP12Q14669 1992 aaPredicted RBP27.02■■□□□ 1.92
CDR2-202ENST00000561630 RRN3P2A6NIE6 340 aa27.02■■□□□ 1.92
CDR2-202ENST00000561630 XBP1P17861 261 aa27.02■■□□□ 1.92
CDR2-202ENST00000561630 TCTN1Q2MV58 587 aa27.02■■□□□ 1.92
CDR2-202ENST00000561630 ZNF746Q6NUN9 644 aaPredicted RBP27.02■■□□□ 1.92
CDR2-202ENST00000561630 TRPC6Q9Y210 931 aa27.02■■□□□ 1.92
CDR2-202ENST00000561630 ABHD14A-ACY1A0A1B0GW23 586 aa27.01■■□□□ 1.91
CDR2-202ENST00000561630 DTNBO60941 627 aa27.01■■□□□ 1.91
CDR2-202ENST00000561630 CTSHP09668 335 aa27.01■■□□□ 1.91
CDR2-202ENST00000561630 WDR5P61964 334 aaKnown RBP27.01■■□□□ 1.91
CDR2-202ENST00000561630 GRIN2CQ14957 1233 aa27.01■■□□□ 1.91
CDR2-202ENST00000561630 FAM26DQ5JW98 314 aa27.01■■□□□ 1.91
CDR2-202ENST00000561630 MIS18BP1Q6P0N0 1132 aa27.01■■□□□ 1.91
CDR2-202ENST00000561630 RUFY4Q6ZNE9 571 aa27.01■■□□□ 1.91
CDR2-202ENST00000561630 WASF1Q92558 559 aa27.01■■□□□ 1.91
CDR2-202ENST00000561630 TET1Q8NFU7 2136 aa27.01■■□□□ 1.91
CDR2-202ENST00000561630 CYP3A7-CYP3A51PA0A087WV96 503 aa27■■□□□ 1.91
CDR2-202ENST00000561630 POTEB3A0JP26 581 aa27■■□□□ 1.91
CDR2-202ENST00000561630 BACH1O14867 736 aa27■■□□□ 1.91
CDR2-202ENST00000561630 MSH4O15457 936 aa27■■□□□ 1.91
CDR2-202ENST00000561630 FDPSP14324 419 aaKnown RBP27■■□□□ 1.91
CDR2-202ENST00000561630 CYP3A7P24462 503 aa27■■□□□ 1.91
CDR2-202ENST00000561630 KCNJ6P48051 423 aa27■■□□□ 1.91
CDR2-202ENST00000561630 IGBP1P78318 339 aa27■■□□□ 1.91
CDR2-202ENST00000561630 KRT76Q01546 638 aa27■■□□□ 1.91
CDR2-202ENST00000561630 IKBKEQ14164 716 aa27■■□□□ 1.91
CDR2-202ENST00000561630 FAM160B1Q5W0V3 765 aa27■■□□□ 1.91
CDR2-202ENST00000561630 POTEBQ6S5H4 581 aa27■■□□□ 1.91
CDR2-202ENST00000561630 KRT25Q7Z3Z0 450 aa27■■□□□ 1.91
CDR2-202ENST00000561630 CCDC60Q8IWA6 550 aaPredicted RBP27■■□□□ 1.91
CDR2-202ENST00000561630 SMAP1Q8IYB5 467 aaPredicted RBP27■■□□□ 1.91
CDR2-202ENST00000561630 NKX2-4Q9H2Z4 354 aa27■■□□□ 1.91
CDR2-202ENST00000561630 SLC28A3Q9HAS3 691 aa27■■□□□ 1.91
CDR2-202ENST00000561630 CHD7Q9P2D1 2997 aa27■■□□□ 1.91
CDR2-202ENST00000561630 EFCAB14O75071 495 aa26.99■■□□□ 1.91
CDR2-202ENST00000561630 MYOGP15173 224 aa26.99■■□□□ 1.91
CDR2-202ENST00000561630 NONOQ15233 471 aaKnown RBP eCLIP26.99■■□□□ 1.91
CDR2-202ENST00000561630 Q4G0T1 1027 aa26.99■■□□□ 1.91
CDR2-202ENST00000561630 SWSAP1Q6NVH7 229 aa26.99■■□□□ 1.91
CDR2-202ENST00000561630 HERC6Q8IVU3 1022 aa26.99■■□□□ 1.91
CDR2-202ENST00000561630 MYLIPQ8WY64 445 aa26.99■■□□□ 1.91
CDR2-202ENST00000561630 RIT2Q99578 217 aa26.99■■□□□ 1.91
CDR2-202ENST00000561630 ZNF302Q9NR11 478 aa26.99■■□□□ 1.91
CDR2-202ENST00000561630 GJB4Q9NTQ9 266 aa26.99■■□□□ 1.91
CDR2-202ENST00000561630 TCEAL9Q9UHQ7 104 aa26.99■■□□□ 1.91
CDR2-202ENST00000561630 PLEKHG4Q58EX7 1191 aa26.98■■□□□ 1.91
CDR2-202ENST00000561630 MOXD1Q6UVY6 613 aa26.98■■□□□ 1.91
CDR2-202ENST00000561630 RSPH3Q86UC2 560 aa26.98■■□□□ 1.91
CDR2-202ENST00000561630 NSUN7Q8NE18 718 aaKnown RBP26.98■■□□□ 1.91
CDR2-202ENST00000561630 DBF4BQ8NFT6 615 aa26.98■■□□□ 1.91
CDR2-202ENST00000561630 ATP8B4Q8TF62 1192 aa26.98■■□□□ 1.91
CDR2-202ENST00000561630 SLC5A5Q92911 643 aa26.98■■□□□ 1.91
CDR2-202ENST00000561630 PCDHA10Q9Y5I2 948 aa26.98■■□□□ 1.91
CDR2-202ENST00000561630 RBAK-RBAKDNI3L0D1 243 aa26.97■■□□□ 1.91
CDR2-202ENST00000561630 PDXDC2PQ6P474 469 aa26.97■■□□□ 1.91
CDR2-202ENST00000561630 MBOAT7Q96N66 472 aa26.97■■□□□ 1.91
CDR2-202ENST00000561630 KIF2CQ99661 725 aa26.97■■□□□ 1.91
CDR2-202ENST00000561630 OSBPL7Q9BZF2 842 aa26.97■■□□□ 1.91
CDR2-202ENST00000561630 MAFBQ9Y5Q3 323 aaPredicted RBP26.97■■□□□ 1.91
CDR2-202ENST00000561630 HBP1O60381 514 aa26.96■■□□□ 1.91
CDR2-202ENST00000561630 TDP2O95551 362 aa26.96■■□□□ 1.91
CDR2-202ENST00000561630 CHRNA1P02708 482 aa26.96■■□□□ 1.91
CDR2-202ENST00000561630 RPLP2P05387 115 aaKnown RBP26.96■■□□□ 1.91
CDR2-202ENST00000561630 PSAPP07602 524 aa26.96■■□□□ 1.91
CDR2-202ENST00000561630 INF2Q27J81 1249 aa26.96■■□□□ 1.91
CDR2-202ENST00000561630 TRAPPC12Q8WVT3 735 aa26.96■■□□□ 1.91
CDR2-202ENST00000561630 DNAJB3Q8WWF6 145 aa26.96■■□□□ 1.91
CDR2-202ENST00000561630 SEPT8Q92599 483 aa26.96■■□□□ 1.91
CDR2-202ENST00000561630 ZBTB10Q96DT7 871 aa26.96■■□□□ 1.91
CDR2-202ENST00000561630 LIMCH1Q9UPQ0 1083 aa26.96■■□□□ 1.91
CDR2-202ENST00000561630 EYSQ5T1H1 3165 aa26.96■■□□□ 1.91
CDR2-202ENST00000561630 A0A0C4DFX4 3053 aa26.95■■□□□ 1.9
CDR2-202ENST00000561630 CCDC194A0A1B0GVG4 234 aa26.95■■□□□ 1.9
CDR2-202ENST00000561630 WDR64B1ANS9 1081 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms