RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 ZDHHC14Q8IZN3 488 aa11.16□□□□□ -0.62
HERC1-210ENST00000560897 SIX5Q8N196 739 aa11.16□□□□□ -0.62
HERC1-210ENST00000560897 RASGRP4Q8TDF6 673 aa11.16□□□□□ -0.62
HERC1-210ENST00000560897 SYTL5Q8TDW5 730 aaPredicted RBP11.16□□□□□ -0.62
HERC1-210ENST00000560897 RIN2Q8WYP3 895 aaPredicted RBP11.16□□□□□ -0.62
HERC1-210ENST00000560897 FTHL17Q9BXU8 183 aa11.16□□□□□ -0.62
HERC1-210ENST00000560897 SETD4Q9NVD3 440 aa11.16□□□□□ -0.62
HERC1-210ENST00000560897 PUF60Q9UHX1 559 aaKnown RBP11.16□□□□□ -0.62
HERC1-210ENST00000560897 DBR1Q9UK59 544 aaKnown RBP11.16□□□□□ -0.62
HERC1-210ENST00000560897 ABCB11O95342 1321 aa11.15□□□□□ -0.62
HERC1-210ENST00000560897 PRR5-ARHGAP8B1AHC4 643 aa11.15□□□□□ -0.62
HERC1-210ENST00000560897 PATL2C9JE40 543 aaKnown RBP11.15□□□□□ -0.62
HERC1-210ENST00000560897 KINO60870 393 aaKnown RBP11.15□□□□□ -0.62
HERC1-210ENST00000560897 FGF18O76093 207 aa11.15□□□□□ -0.62
HERC1-210ENST00000560897 LGALS2P05162 132 aa11.15□□□□□ -0.62
HERC1-210ENST00000560897 NR3C2P08235 984 aa11.15□□□□□ -0.62
HERC1-210ENST00000560897 IBSPP21815 317 aaPredicted RBP11.15□□□□□ -0.62
HERC1-210ENST00000560897 ARHGAP8P85298 464 aa11.15□□□□□ -0.62
HERC1-210ENST00000560897 LPIN1Q14693 890 aa11.15□□□□□ -0.62
HERC1-210ENST00000560897 TAF2Q6P1X5 1199 aa11.15□□□□□ -0.62
HERC1-210ENST00000560897 TSHZ1Q6ZSZ6 1077 aa11.15□□□□□ -0.62
HERC1-210ENST00000560897 COL26A1Q96A83 441 aa11.15□□□□□ -0.62
HERC1-210ENST00000560897 ADAM7Q9H2U9 754 aa11.15□□□□□ -0.62
HERC1-210ENST00000560897 IL17RBQ9NRM6 502 aa11.15□□□□□ -0.62
HERC1-210ENST00000560897 TMEM260Q9NX78 707 aa11.15□□□□□ -0.62
HERC1-210ENST00000560897 CHRNA1P02708 482 aa11.14□□□□□ -0.63
HERC1-210ENST00000560897 ADRB1P08588 477 aa11.14□□□□□ -0.63
HERC1-210ENST00000560897 TOP1P11387 765 aaKnown RBP11.14□□□□□ -0.63
HERC1-210ENST00000560897 MYCLP12524 364 aaPredicted RBP11.14□□□□□ -0.63
HERC1-210ENST00000560897 NPR3P17342 541 aa11.14□□□□□ -0.63
HERC1-210ENST00000560897 ERVFC1P60507 584 aa11.14□□□□□ -0.63
HERC1-210ENST00000560897 LMNB2Q03252 620 aa11.14□□□□□ -0.63
HERC1-210ENST00000560897 OSBP2Q969R2 916 aa11.14□□□□□ -0.63
HERC1-210ENST00000560897 ACSF2Q96CM8 615 aaPredicted RBP11.14□□□□□ -0.63
HERC1-210ENST00000560897 TCF25Q9BQ70 676 aa11.14□□□□□ -0.63
HERC1-210ENST00000560897 RTKNQ9BST9 563 aa11.14□□□□□ -0.63
HERC1-210ENST00000560897 USP26Q9BXU7 913 aa11.14□□□□□ -0.63
HERC1-210ENST00000560897 EHMT1Q9H9B1 1298 aa11.14□□□□□ -0.63
HERC1-210ENST00000560897 ERVK-5Q9HDB9 667 aa11.14□□□□□ -0.63
HERC1-210ENST00000560897 CYP26B1Q9NR63 512 aa11.14□□□□□ -0.63
HERC1-210ENST00000560897 TOMM22Q9NS69 142 aa11.14□□□□□ -0.63
HERC1-210ENST00000560897 RALYQ9UKM9 306 aaKnown RBP11.14□□□□□ -0.63
HERC1-210ENST00000560897 USP24Q9UPU5 2620 aa11.13□□□□□ -0.63
HERC1-210ENST00000560897 FANCMQ8IYD8 2048 aa11.13□□□□□ -0.63
HERC1-210ENST00000560897 FSCN2O14926 492 aa11.13□□□□□ -0.63
HERC1-210ENST00000560897 RNF113AO15541 343 aaKnown RBP11.13□□□□□ -0.63
HERC1-210ENST00000560897 RAB11FIP3O75154 756 aa11.13□□□□□ -0.63
HERC1-210ENST00000560897 HMMRO75330 724 aa11.13□□□□□ -0.63
HERC1-210ENST00000560897 ZFYP08048 801 aaPredicted RBP11.13□□□□□ -0.63
HERC1-210ENST00000560897 HSPD1P10809 573 aaKnown RBP11.13□□□□□ -0.63
HERC1-210ENST00000560897 SCG2P13521 617 aa11.13□□□□□ -0.63
HERC1-210ENST00000560897 UBA1P22314 1058 aaKnown RBP11.13□□□□□ -0.63
HERC1-210ENST00000560897 TDGQ13569 410 aa11.13□□□□□ -0.63
HERC1-210ENST00000560897 FBXO47Q5MNV8 452 aa11.13□□□□□ -0.63
HERC1-210ENST00000560897 ATAT1Q5SQI0 421 aa11.13□□□□□ -0.63
HERC1-210ENST00000560897 LMBR1Q8WVP7 490 aa11.13□□□□□ -0.63
HERC1-210ENST00000560897 NGRNQ9NPE2 291 aaKnown RBP11.13□□□□□ -0.63
HERC1-210ENST00000560897 PXMP2Q9NR77 195 aa11.13□□□□□ -0.63
HERC1-210ENST00000560897 SH2B1Q9NRF2 756 aaPredicted RBP11.13□□□□□ -0.63
HERC1-210ENST00000560897 COL20A1Q9P218 1284 aa11.13□□□□□ -0.63
HERC1-210ENST00000560897 CDH22Q9UJ99 828 aa11.13□□□□□ -0.63
HERC1-210ENST00000560897 DUSP12Q9UNI6 340 aa11.13□□□□□ -0.63
HERC1-210ENST00000560897 USTQ9Y2C2 406 aa11.13□□□□□ -0.63
HERC1-210ENST00000560897 NRCAMQ92823 1304 aa11.12□□□□□ -0.63
HERC1-210ENST00000560897 MYH6P13533 1939 aa11.12□□□□□ -0.63
HERC1-210ENST00000560897 DCDC2BA2VCK2 349 aa11.12□□□□□ -0.63
HERC1-210ENST00000560897 M0QZ92 97 aa11.12□□□□□ -0.63
HERC1-210ENST00000560897 M0R2C6 588 aa11.12□□□□□ -0.63
HERC1-210ENST00000560897 TGFB3P10600 412 aa11.12□□□□□ -0.63
HERC1-210ENST00000560897 PDHBP11177 359 aa11.12□□□□□ -0.63
HERC1-210ENST00000560897 CD52P31358 61 aa11.12□□□□□ -0.63
HERC1-210ENST00000560897 CA8P35219 290 aa11.12□□□□□ -0.63
HERC1-210ENST00000560897 ZNF543Q08ER8 600 aa11.12□□□□□ -0.63
HERC1-210ENST00000560897 TBC1D8BQ0IIM8 1120 aa11.12□□□□□ -0.63
HERC1-210ENST00000560897 APOBRQ0VD83 1088 aa11.12□□□□□ -0.63
HERC1-210ENST00000560897 KCNC3Q14003 757 aa11.12□□□□□ -0.63
HERC1-210ENST00000560897 CDC37Q16543 378 aaPredicted RBP11.12□□□□□ -0.63
HERC1-210ENST00000560897 SPECC1Q5M775 1068 aa11.12□□□□□ -0.63
HERC1-210ENST00000560897 VARS2Q5ST30 1063 aaKnown RBP11.12□□□□□ -0.63
HERC1-210ENST00000560897 DIEXFQ68CQ4 756 aaKnown RBP11.12□□□□□ -0.63
HERC1-210ENST00000560897 XRRA1Q6P2D8 792 aa11.12□□□□□ -0.63
HERC1-210ENST00000560897 KBTBD3Q8NAB2 608 aa11.12□□□□□ -0.63
HERC1-210ENST00000560897 TMEM87AQ8NBN3 555 aa11.12□□□□□ -0.63
HERC1-210ENST00000560897 TBC1D5Q92609 795 aa11.12□□□□□ -0.63
HERC1-210ENST00000560897 LZTS1Q9Y250 596 aa11.12□□□□□ -0.63
HERC1-210ENST00000560897 MRPL11Q9Y3B7 192 aaKnown RBP11.12□□□□□ -0.63
HERC1-210ENST00000560897 PCDHB7Q9Y5E2 793 aa11.12□□□□□ -0.63
HERC1-210ENST00000560897 CDY2AQ9Y6F7 541 aa11.12□□□□□ -0.63
HERC1-210ENST00000560897 SPDYE4A6NLX3 237 aa11.11□□□□□ -0.63
HERC1-210ENST00000560897 TBKBP1A7MCY6 615 aa11.11□□□□□ -0.63
HERC1-210ENST00000560897 EOMESO95936 686 aa11.11□□□□□ -0.63
HERC1-210ENST00000560897 CFBP00751 764 aa11.11□□□□□ -0.63
HERC1-210ENST00000560897 RPLP2P05387 115 aaKnown RBP11.11□□□□□ -0.63
HERC1-210ENST00000560897 SP9P0CG40 484 aa11.11□□□□□ -0.63
HERC1-210ENST00000560897 LAG3P18627 525 aa11.11□□□□□ -0.63
HERC1-210ENST00000560897 GATMP50440 423 aa11.11□□□□□ -0.63
HERC1-210ENST00000560897 MGAT3Q09327 533 aa11.11□□□□□ -0.63
HERC1-210ENST00000560897 PAK2Q13177 524 aa11.11□□□□□ -0.63
HERC1-210ENST00000560897 BMS1Q14692 1282 aaKnown RBP11.11□□□□□ -0.63
HERC1-210ENST00000560897 RARS2Q5T160 578 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms