RNA–Protein interactions for RNA: ENST00000560734.5

SHF-208, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3 BASIC

Gene SHF, Length 1,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-208ENST00000560734 HOXC10Q9NYD6 342 aa27.75■■■□□ 2.03
SHF-208ENST00000560734 ODF2LQ9ULJ1 636 aa27.75■■■□□ 2.03
SHF-208ENST00000560734 TRAF5O00463 557 aa27.75■■■□□ 2.03
SHF-208ENST00000560734 PDXKO00764 312 aa27.75■■■□□ 2.03
SHF-208ENST00000560734 MRPS9P82933 396 aaKnown RBP27.75■■■□□ 2.03
SHF-208ENST00000560734 CDK17Q00537 523 aa27.75■■■□□ 2.03
SHF-208ENST00000560734 MEA1Q16626 185 aa27.75■■■□□ 2.03
SHF-208ENST00000560734 ANKRD7Q92527 254 aa27.75■■■□□ 2.03
SHF-208ENST00000560734 ZNF592Q92610 1267 aa27.75■■■□□ 2.03
SHF-208ENST00000560734 RNF225M0QZC1 329 aaPredicted RBP27.74■■■□□ 2.03
SHF-208ENST00000560734 EIF3DO15371 548 aaKnown RBP eCLIP27.74■■■□□ 2.03
SHF-208ENST00000560734 MAFGO15525 162 aa27.74■■■□□ 2.03
SHF-208ENST00000560734 LYPLA2O95372 231 aa27.74■■■□□ 2.03
SHF-208ENST00000560734 HMGCS2P54868 508 aa27.74■■■□□ 2.03
SHF-208ENST00000560734 KNOP1Q1ED39 458 aaKnown RBP27.74■■■□□ 2.03
SHF-208ENST00000560734 SFR1Q86XK3 245 aa27.74■■■□□ 2.03
SHF-208ENST00000560734 TAAR1Q96RJ0 339 aa27.74■■■□□ 2.03
SHF-208ENST00000560734 RUSC1Q9BVN2 902 aa27.74■■■□□ 2.03
SHF-208ENST00000560734 L2HGDHQ9H9P8 463 aa27.74■■■□□ 2.03
SHF-208ENST00000560734 PXMP2Q9NR77 195 aa27.74■■■□□ 2.03
SHF-208ENST00000560734 RNF146Q9NTX7 359 aa27.74■■■□□ 2.03
SHF-208ENST00000560734 FAM184BQ9ULE4 1060 aa27.74■■■□□ 2.03
SHF-208ENST00000560734 UBE4BO95155 1302 aa27.74■■■□□ 2.03
SHF-208ENST00000560734 USP2O75604 605 aaPredicted RBP27.73■■■□□ 2.03
SHF-208ENST00000560734 P4HBP07237 508 aaKnown RBP27.73■■■□□ 2.03
SHF-208ENST00000560734 TRIM21P19474 475 aaKnown RBP27.73■■■□□ 2.03
SHF-208ENST00000560734 ZNF131P52739 623 aa27.73■■■□□ 2.03
SHF-208ENST00000560734 MTMR1Q13613 665 aa27.73■■■□□ 2.03
SHF-208ENST00000560734 ZNF397Q8NF99 534 aaPredicted RBP27.73■■■□□ 2.03
SHF-208ENST00000560734 IL31RAQ8NI17 732 aa27.73■■■□□ 2.03
SHF-208ENST00000560734 PDCD2LQ9BRP1 358 aa27.73■■■□□ 2.03
SHF-208ENST00000560734 CHMP2AO43633 222 aa27.72■■■□□ 2.03
SHF-208ENST00000560734 GUCY2CP25092 1073 aa27.72■■■□□ 2.03
SHF-208ENST00000560734 MAP3K9P80192 1104 aa27.72■■■□□ 2.03
SHF-208ENST00000560734 PPP2R3AQ06190 1150 aa27.72■■■□□ 2.03
SHF-208ENST00000560734 PRAMEF18Q5VWM3 479 aa27.72■■■□□ 2.03
SHF-208ENST00000560734 SYT10Q6XYQ8 523 aa27.72■■■□□ 2.03
SHF-208ENST00000560734 MIER3Q7Z3K6 550 aa27.72■■■□□ 2.03
SHF-208ENST00000560734 ZNF710Q8N1W2 664 aa27.72■■■□□ 2.03
SHF-208ENST00000560734 RMDN3Q96TC7 470 aa27.72■■■□□ 2.03
SHF-208ENST00000560734 FGFBP2Q9BYJ0 223 aa27.72■■■□□ 2.03
SHF-208ENST00000560734 ZSWIM4Q9H7M6 989 aa27.72■■■□□ 2.03
SHF-208ENST00000560734 TBC1D7Q9P0N9 293 aa27.72■■■□□ 2.03
SHF-208ENST00000560734 ZNF214Q9UL59 606 aaPredicted RBP27.72■■■□□ 2.03
SHF-208ENST00000560734 SIK3Q9Y2K2 1263 aa27.72■■■□□ 2.03
SHF-208ENST00000560734 RASSF10A6NK89 507 aa27.72■■■□□ 2.03
SHF-208ENST00000560734 CETN3O15182 167 aa27.72■■■□□ 2.03
SHF-208ENST00000560734 CACNB1Q02641 598 aaPredicted RBP27.72■■■□□ 2.03
SHF-208ENST00000560734 NFIL3Q16649 462 aa27.72■■■□□ 2.03
SHF-208ENST00000560734 RDM1Q8NG50 284 aa27.72■■■□□ 2.03
SHF-208ENST00000560734 HOMER2Q9NSB8 354 aa27.72■■■□□ 2.03
SHF-208ENST00000560734 DBR1Q9UK59 544 aaKnown RBP27.72■■■□□ 2.03
SHF-208ENST00000560734 CALUO43852 315 aaPredicted RBP27.71■■■□□ 2.03
SHF-208ENST00000560734 HNRNPH3P31942 346 aaKnown RBP27.71■■■□□ 2.03
SHF-208ENST00000560734 ERVK-24P63145 666 aa27.71■■■□□ 2.03
SHF-208ENST00000560734 RAD51AP2Q09MP3 1159 aa27.71■■■□□ 2.03
SHF-208ENST00000560734 SLC30A10Q6XR72 485 aa27.71■■■□□ 2.03
SHF-208ENST00000560734 LXNQ9BS40 222 aa27.71■■■□□ 2.03
SHF-208ENST00000560734 TEX13BQ9BXU2 312 aa27.71■■■□□ 2.03
SHF-208ENST00000560734 ZHX3Q9H4I2 956 aa27.71■■■□□ 2.03
SHF-208ENST00000560734 TYW1Q9NV66 732 aaKnown RBP27.71■■■□□ 2.03
SHF-208ENST00000560734 ZNHIT6Q9NWK9 470 aaKnown RBP27.71■■■□□ 2.03
SHF-208ENST00000560734 STAM2O75886 525 aa27.7■■■□□ 2.03
SHF-208ENST00000560734 MTF1Q14872 753 aa27.7■■■□□ 2.03
SHF-208ENST00000560734 STXBP4Q6ZWJ1 553 aa27.7■■■□□ 2.03
SHF-208ENST00000560734 TRIM59Q8IWR1 403 aa27.7■■■□□ 2.03
SHF-208ENST00000560734 PIGOQ8TEQ8 1089 aa27.7■■■□□ 2.03
SHF-208ENST00000560734 DCPSQ96C86 337 aaKnown RBP27.7■■■□□ 2.03
SHF-208ENST00000560734 EEF2KMTQ96G04 330 aa27.7■■■□□ 2.03
SHF-208ENST00000560734 PARVGQ9HBI0 331 aa27.7■■■□□ 2.03
SHF-208ENST00000560734 FAM13AO94988 1023 aa27.7■■■□□ 2.02
SHF-208ENST00000560734 SFNP31947 248 aa27.7■■■□□ 2.02
SHF-208ENST00000560734 ADAM9Q13443 819 aa27.7■■■□□ 2.02
SHF-208ENST00000560734 CCDC40Q4G0X9 1142 aa27.7■■■□□ 2.02
SHF-208ENST00000560734 ARHGEF16Q5VV41 709 aa27.7■■■□□ 2.02
SHF-208ENST00000560734 SNRNP48Q6IEG0 339 aaKnown RBP27.7■■■□□ 2.02
SHF-208ENST00000560734 FRMD5Q7Z6J6 570 aa27.7■■■□□ 2.02
SHF-208ENST00000560734 VSIG10LQ86VR7 867 aa27.7■■■□□ 2.02
SHF-208ENST00000560734 GPRASP2Q96D09 838 aa27.7■■■□□ 2.02
SHF-208ENST00000560734 MRPL44Q9H9J2 332 aaKnown RBP27.7■■■□□ 2.02
SHF-208ENST00000560734 PAPPA2Q9BXP8 1791 aa27.69■■■□□ 2.02
SHF-208ENST00000560734 RPL13P26373 211 aaKnown RBP27.69■■■□□ 2.02
SHF-208ENST00000560734 CCND2P30279 289 aa27.69■■■□□ 2.02
SHF-208ENST00000560734 JAK3P52333 1124 aa27.69■■■□□ 2.02
SHF-208ENST00000560734 ITGB3BPQ13352 177 aaPredicted RBP27.69■■■□□ 2.02
SHF-208ENST00000560734 ZNF662Q6ZS27 426 aa27.69■■■□□ 2.02
SHF-208ENST00000560734 NELFCDQ8IXH7 590 aa27.69■■■□□ 2.02
SHF-208ENST00000560734 CCDC170Q8IYT3 715 aa27.69■■■□□ 2.02
SHF-208ENST00000560734 TIPINQ9BVW5 301 aa27.69■■■□□ 2.02
SHF-208ENST00000560734 RIPK3Q9Y572 518 aa27.69■■■□□ 2.02
SHF-208ENST00000560734 SNCAIPQ9Y6H5 919 aa27.69■■■□□ 2.02
SHF-208ENST00000560734 DDNO94850 711 aaPredicted RBP27.68■■■□□ 2.02
SHF-208ENST00000560734 EIF2AK2P19525 551 aaKnown RBP27.68■■■□□ 2.02
SHF-208ENST00000560734 KRT76Q01546 638 aa27.68■■■□□ 2.02
SHF-208ENST00000560734 BAATQ14032 418 aaPredicted RBP27.68■■■□□ 2.02
SHF-208ENST00000560734 NSMFQ6X4W1 530 aa27.68■■■□□ 2.02
SHF-208ENST00000560734 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.68■■■□□ 2.02
SHF-208ENST00000560734 NSUN6Q8TEA1 469 aaKnown RBP27.68■■■□□ 2.02
SHF-208ENST00000560734 SENP7Q9BQF6 1050 aa27.68■■■□□ 2.02
SHF-208ENST00000560734 EPN1Q9Y6I3 576 aaPredicted RBP27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms