RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 NEK11Q8NG66 645 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 HNRNPLLQ8WVV9 542 aaKnown RBP10.73□□□□□ -0.69
RTF1-206ENST00000560447 SLC5A5Q92911 643 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 CCDC42Q96M95 316 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 CHP1Q99653 195 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 GBP3Q9H0R5 595 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 KCTD10Q9H3F6 313 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 NHEJ1Q9H9Q4 299 aaPredicted RBP10.73□□□□□ -0.69
RTF1-206ENST00000560447 METTL14Q9HCE5 456 aaKnown RBP10.73□□□□□ -0.69
RTF1-206ENST00000560447 OLFML3Q9NRN5 406 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 EMILIN3Q9NT22 766 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 CEP72Q9P209 647 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 SEL1LQ9UBV2 794 aa10.73□□□□□ -0.69
RTF1-206ENST00000560447 REXO2Q9Y3B8 237 aaKnown RBP10.73□□□□□ -0.69
RTF1-206ENST00000560447 IGLV3-22A0A075B6J6 115 aa10.72□□□□□ -0.69
RTF1-206ENST00000560447 E9PMD0 336 aa10.72□□□□□ -0.69
RTF1-206ENST00000560447 TRAF5O00463 557 aa10.72□□□□□ -0.69
RTF1-206ENST00000560447 OPLAHO14841 1288 aa10.72□□□□□ -0.69
RTF1-206ENST00000560447 SLC16A3O15427 465 aaKnown RBP10.72□□□□□ -0.69
RTF1-206ENST00000560447 MSH4O15457 936 aa10.72□□□□□ -0.69
RTF1-206ENST00000560447 PJA2O43164 708 aa10.72□□□□□ -0.69
RTF1-206ENST00000560447 ZRANB2O95218 330 aaKnown RBP eCLIP10.72□□□□□ -0.69
RTF1-206ENST00000560447 SPATA31C1P0DKV0 1188 aa10.72□□□□□ -0.69
RTF1-206ENST00000560447 MCM3P25205 808 aa10.72□□□□□ -0.69
RTF1-206ENST00000560447 RPS12P25398 132 aaKnown RBP10.72□□□□□ -0.69
RTF1-206ENST00000560447 RPL13P26373 211 aaKnown RBP10.72□□□□□ -0.69
RTF1-206ENST00000560447 ZNF76P36508 570 aa10.72□□□□□ -0.69
RTF1-206ENST00000560447 CHMP4BP1P59074 171 aa10.72□□□□□ -0.69
RTF1-206ENST00000560447 AMPD2Q01433 879 aa10.72□□□□□ -0.69
RTF1-206ENST00000560447 KIF5AQ12840 1032 aa10.72□□□□□ -0.69
RTF1-206ENST00000560447 TNFAIP1Q13829 316 aa10.72□□□□□ -0.69
RTF1-206ENST00000560447 CCDC40Q4G0X9 1142 aa10.72□□□□□ -0.69
RTF1-206ENST00000560447 PAPD7Q5XG87 772 aaKnown RBP10.72□□□□□ -0.69
RTF1-206ENST00000560447 STXBP4Q6ZWJ1 553 aa10.72□□□□□ -0.69
RTF1-206ENST00000560447 KIAA1328Q86T90 577 aa10.72□□□□□ -0.69
RTF1-206ENST00000560447 CATSPER3Q86XQ3 398 aa10.72□□□□□ -0.69
RTF1-206ENST00000560447 FMNL3Q8IVF7 1028 aa10.72□□□□□ -0.69
RTF1-206ENST00000560447 CCDC155Q8N6L0 562 aa10.72□□□□□ -0.69
RTF1-206ENST00000560447 MSANTD4Q8NCY6 345 aa10.72□□□□□ -0.69
RTF1-206ENST00000560447 LPAR1Q92633 364 aa10.72□□□□□ -0.69
RTF1-206ENST00000560447 JAKMIP2Q96AA8 810 aa10.72□□□□□ -0.69
RTF1-206ENST00000560447 FBXL5Q9UKA1 691 aa10.72□□□□□ -0.69
RTF1-206ENST00000560447 CTAGE15A4D2H0 777 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 TCP10L2B9ZVM9 353 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 FAM86B1E9PN63 330 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 WDR46O15213 610 aaKnown RBP10.71□□□□□ -0.69
RTF1-206ENST00000560447 PSMD10O75832 226 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 FAM86B2P0C5J1 330 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 CTAGE8P0CG41 777 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 PRLRP16471 622 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 COL4A5P29400 1685 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 HERVK_113P62684 666 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 JAG1P78504 1218 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 GIT2Q14161 759 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 DOCK1Q14185 1865 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 RRP1BQ14684 758 aaKnown RBP10.71□□□□□ -0.69
RTF1-206ENST00000560447 MFSD10Q14728 455 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 TNIP1Q15025 636 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 USH1GQ495M9 461 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 ARSHQ5FYA8 562 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 CCDC122Q5T0U0 273 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 NCAPH2Q6IBW4 605 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 IQCEQ6IPM2 695 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 PDXDC1Q6P996 788 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 TRAPPC11Q7Z392 1133 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 CTAGE6Q86UF2 777 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 MCF2L2Q86YR7 1114 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 CTAGE4Q8IX94 777 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 RNF10Q8N5U6 811 aaKnown RBP10.71□□□□□ -0.69
RTF1-206ENST00000560447 TRIM58Q8NG06 486 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 SCFD1Q8WVM8 642 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 RUBCNQ92622 972 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 RIT2Q99578 217 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 PLCB1Q9NQ66 1216 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 AGPAT5Q9NUQ2 364 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 TYW1Q9NV66 732 aaKnown RBP10.71□□□□□ -0.69
RTF1-206ENST00000560447 PGAP2Q9UHJ9 254 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 RAB21Q9UL25 225 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 ODF2LQ9ULJ1 636 aa10.71□□□□□ -0.69
RTF1-206ENST00000560447 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.71□□□□□ -0.69
RTF1-206ENST00000560447 MYH11P35749 1972 aa10.7□□□□□ -0.7
RTF1-206ENST00000560447 PARP14Q460N5 1801 aa10.7□□□□□ -0.7
RTF1-206ENST00000560447 FRMPD4Q14CM0 1322 aa10.7□□□□□ -0.7
RTF1-206ENST00000560447 RPTORQ8N122 1335 aa10.7□□□□□ -0.7
RTF1-206ENST00000560447 GTPBP10A4D1E9 387 aaKnown RBP10.7□□□□□ -0.7
RTF1-206ENST00000560447 RBAK-RBAKDNI3L0D1 243 aa10.7□□□□□ -0.7
RTF1-206ENST00000560447 TBCAO75347 108 aaKnown RBP10.7□□□□□ -0.7
RTF1-206ENST00000560447 TACC1O75410 805 aa10.7□□□□□ -0.7
RTF1-206ENST00000560447 ERLIN1O75477 346 aa10.7□□□□□ -0.7
RTF1-206ENST00000560447 SSBP05455 408 aaKnown RBP eCLIP10.7□□□□□ -0.7
RTF1-206ENST00000560447 KCNA3P22001 575 aa10.7□□□□□ -0.7
RTF1-206ENST00000560447 PTGER2P43116 358 aa10.7□□□□□ -0.7
RTF1-206ENST00000560447 HSD17B4P51659 736 aa10.7□□□□□ -0.7
RTF1-206ENST00000560447 PRELPP51888 382 aa10.7□□□□□ -0.7
RTF1-206ENST00000560447 EN1Q05925 392 aaPredicted RBP10.7□□□□□ -0.7
RTF1-206ENST00000560447 ITIH3Q06033 890 aa10.7□□□□□ -0.7
RTF1-206ENST00000560447 SF3B2Q13435 895 aaKnown RBP10.7□□□□□ -0.7
RTF1-206ENST00000560447 MYBPC2Q14324 1141 aa10.7□□□□□ -0.7
RTF1-206ENST00000560447 EPHA7Q15375 998 aa10.7□□□□□ -0.7
RTF1-206ENST00000560447 KNOP1Q1ED39 458 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms