RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 EYA4O95677 639 aa12.08□□□□□ -0.48
SNRPA1-211ENST00000560433 COPB1P53618 953 aaKnown RBP12.08□□□□□ -0.48
SNRPA1-211ENST00000560433 CCZ1BP86790 482 aa12.08□□□□□ -0.48
SNRPA1-211ENST00000560433 CCZ1P86791 482 aaPredicted RBP12.08□□□□□ -0.48
SNRPA1-211ENST00000560433 SP2Q02086 613 aa12.08□□□□□ -0.48
SNRPA1-211ENST00000560433 NOLC1Q14978 699 aaKnown RBP eCLIP12.08□□□□□ -0.48
SNRPA1-211ENST00000560433 EPHA7Q15375 998 aa12.08□□□□□ -0.48
SNRPA1-211ENST00000560433 TUFT1Q9NNX1 390 aa12.08□□□□□ -0.48
SNRPA1-211ENST00000560433 LCTP09848 1927 aa12.07□□□□□ -0.48
SNRPA1-211ENST00000560433 PRPF6O94906 941 aaKnown RBP12.07□□□□□ -0.48
SNRPA1-211ENST00000560433 MYBP10242 640 aa12.07□□□□□ -0.48
SNRPA1-211ENST00000560433 SCFD1Q8WVM8 642 aa12.07□□□□□ -0.48
SNRPA1-211ENST00000560433 ZC3H4Q9UPT8 1303 aaKnown RBP12.07□□□□□ -0.48
SNRPA1-211ENST00000560433 USP27XA6NNY8 438 aa12.07□□□□□ -0.48
SNRPA1-211ENST00000560433 B4DLN1 442 aa12.07□□□□□ -0.48
SNRPA1-211ENST00000560433 ZNF500O60304 480 aaPredicted RBP12.07□□□□□ -0.48
SNRPA1-211ENST00000560433 TPM3P06753 285 aa12.07□□□□□ -0.48
SNRPA1-211ENST00000560433 SFPQP23246 707 aaKnown RBP eCLIP12.07□□□□□ -0.48
SNRPA1-211ENST00000560433 PLA2G4FQ68DD2 849 aa12.07□□□□□ -0.48
SNRPA1-211ENST00000560433 SPECC1LQ69YQ0 1117 aa12.07□□□□□ -0.48
SNRPA1-211ENST00000560433 CENPPQ6IPU0 288 aa12.07□□□□□ -0.48
SNRPA1-211ENST00000560433 MYPNQ86TC9 1320 aa12.07□□□□□ -0.48
SNRPA1-211ENST00000560433 RIOX2Q8IUF8 465 aa12.07□□□□□ -0.48
SNRPA1-211ENST00000560433 MYOCDQ8IZQ8 938 aa12.07□□□□□ -0.48
SNRPA1-211ENST00000560433 CNOT6LQ96LI5 555 aaKnown RBP12.07□□□□□ -0.48
SNRPA1-211ENST00000560433 TRMT1Q9NXH9 659 aaKnown RBP12.07□□□□□ -0.48
SNRPA1-211ENST00000560433 TCEAL9Q9UHQ7 104 aa12.07□□□□□ -0.48
SNRPA1-211ENST00000560433 NMT1P30419 496 aaKnown RBP12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 KLK7P49862 253 aa12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 NPEPPSP55786 919 aa12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 UBXN1Q04323 297 aa12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 ZC2HC1CQ53FD0 456 aaPredicted RBP12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 C1orf186Q6ZWK4 172 aa12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 NLRX1Q86UT6 975 aa12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 TEX2Q8IWB9 1127 aa12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 GUF1Q8N442 669 aaKnown RBP12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 CHST13Q8NET6 341 aa12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 INPP4AQ96PE3 977 aaPredicted RBP12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 PORCNQ9H237 461 aa12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 MRPL44Q9H9J2 332 aaKnown RBP12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 EFCC1Q9HA90 598 aa12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 IMPACTQ9P2X3 320 aa12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 LIMA1Q9UHB6 759 aaKnown RBP12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 PNMA2Q9UL42 364 aa12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 BICDL2A1A5D9 508 aa12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 SOWAHBA6NEL2 793 aa12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 RNF225M0QZC1 329 aaPredicted RBP12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 P4HBP07237 508 aaKnown RBP12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 RBL2Q08999 1139 aa12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 SNAPC2Q13487 334 aa12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 FILIP1LQ4L180 1135 aa12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 CYFIP1Q7L576 1253 aa12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 NIPA1Q7RTP0 329 aa12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 MYCT1Q8N699 235 aa12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 ANKRD13CQ8N6S4 541 aa12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 NACC1Q96RE7 527 aa12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 TUBGCP2Q9BSJ2 902 aa12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 GBA2Q9HCG7 927 aaPredicted RBP12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 TBC1D22BQ9NU19 505 aa12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 LOC285556D6RIA3 1793 aa12.06□□□□□ -0.48
SNRPA1-211ENST00000560433 POTEB2H3BUK9 544 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 USO1O60763 962 aaKnown RBP12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 TBCAO75347 108 aaKnown RBP12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 GCNT3O95395 438 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 KCNA2P16389 499 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 MTIF2P46199 727 aaKnown RBP12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 ALDH5A1P51649 535 aaPredicted RBP12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 PSMD2Q13200 908 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 FASTKD5Q7L8L6 764 aaKnown RBP12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 SAMD3Q8N6K7 520 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 SMCR8Q8TEV9 937 aaPredicted RBP12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 CTAGE1Q96RT6 745 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 MAGEC2Q9UBF1 373 aaPredicted RBP12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 CCL15-CCL14A0A0B4J2E2 113 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 FRMD3A2A2Y4 597 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 ARHGEF35A5YM69 484 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 DCAF8L1A6NGE4 600 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 LRRC10BA6NIK2 292 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 PDHXO00330 501 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 FAM13AO94988 1023 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 CASP14P31944 242 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 YWHABP31946 246 aaKnown RBP12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 HOXD13P35453 343 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 QARSP47897 775 aaKnown RBP12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 SOX10P56693 466 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 GSDMDP57764 484 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 STXBP2Q15833 593 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 CCL15Q16663 113 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 DNTTIP2Q5QJE6 756 aaKnown RBP12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 TMEM63BQ5T3F8 832 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 CST9Q5W186 159 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 SWSAP1Q6NVH7 229 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 GPIHBP1Q8IV16 184 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 CCDC155Q8N6L0 562 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 MB21D1Q8N884 522 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 MS4A4AQ96JQ5 239 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 THAP9Q9H5L6 903 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 ZSWIM4Q9H7M6 989 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 GPRC5CQ9NQ84 441 aa12.05□□□□□ -0.48
SNRPA1-211ENST00000560433 GABBR1Q9UBS5 961 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms