RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 RRN3P2A6NIE6 340 aa15.49■□□□□ 0.07
SMAD3-214ENST00000560402 EPB41L2O43491 1005 aaKnown RBP15.49■□□□□ 0.07
SMAD3-214ENST00000560402 NAPAP54920 295 aa15.49■□□□□ 0.07
SMAD3-214ENST00000560402 AP3B2Q13367 1082 aa15.49■□□□□ 0.07
SMAD3-214ENST00000560402 KRT32Q14532 448 aa15.49■□□□□ 0.07
SMAD3-214ENST00000560402 EPC2Q52LR7 807 aa15.49■□□□□ 0.07
SMAD3-214ENST00000560402 WWC2Q6AWC2 1192 aa15.49■□□□□ 0.07
SMAD3-214ENST00000560402 RAB11FIP4Q86YS3 637 aa15.49■□□□□ 0.07
SMAD3-214ENST00000560402 ANP32EQ9BTT0 268 aa15.49■□□□□ 0.07
SMAD3-214ENST00000560402 LRRC2Q9BYS8 371 aa15.49■□□□□ 0.07
SMAD3-214ENST00000560402 AZI2Q9H6S1 392 aa15.49■□□□□ 0.07
SMAD3-214ENST00000560402 RIC8AQ9NPQ8 531 aa15.49■□□□□ 0.07
SMAD3-214ENST00000560402 TELO2Q9Y4R8 837 aa15.49■□□□□ 0.07
SMAD3-214ENST00000560402 TTC3P53804 2025 aa15.49■□□□□ 0.07
SMAD3-214ENST00000560402 LOXHD1Q8IVV2 1947 aa15.49■□□□□ 0.07
SMAD3-214ENST00000560402 hCG_1642624A0A1W2PR95 340 aa15.48■□□□□ 0.07
SMAD3-214ENST00000560402 H3BNC9 293 aa15.48■□□□□ 0.07
SMAD3-214ENST00000560402 ZBTB43O43298 467 aa15.48■□□□□ 0.07
SMAD3-214ENST00000560402 CHRNA1P02708 482 aa15.48■□□□□ 0.07
SMAD3-214ENST00000560402 GHRP10912 638 aa15.48■□□□□ 0.07
SMAD3-214ENST00000560402 MARK3P27448 753 aa15.48■□□□□ 0.07
SMAD3-214ENST00000560402 COL9A3Q14050 684 aaPredicted RBP15.48■□□□□ 0.07
SMAD3-214ENST00000560402 RTN1Q16799 776 aa15.48■□□□□ 0.07
SMAD3-214ENST00000560402 TSGA10IPQ3SY00 556 aa15.48■□□□□ 0.07
SMAD3-214ENST00000560402 RUFY4Q6ZNE9 571 aa15.48■□□□□ 0.07
SMAD3-214ENST00000560402 TSHZ1Q6ZSZ6 1077 aa15.48■□□□□ 0.07
SMAD3-214ENST00000560402 FAM43BQ6ZT52 329 aaPredicted RBP15.48■□□□□ 0.07
SMAD3-214ENST00000560402 CCDC82Q8N4S0 544 aa15.48■□□□□ 0.07
SMAD3-214ENST00000560402 MXRA8Q9BRK3 442 aa15.48■□□□□ 0.07
SMAD3-214ENST00000560402 SDF4Q9BRK5 362 aa15.48■□□□□ 0.07
SMAD3-214ENST00000560402 SLC9A2Q9UBY0 812 aa15.48■□□□□ 0.07
SMAD3-214ENST00000560402 SQORQ9Y6N5 450 aa15.48■□□□□ 0.07
SMAD3-214ENST00000560402 ADGRA3Q8IWK6 1321 aa15.47■□□□□ 0.07
SMAD3-214ENST00000560402 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.47■□□□□ 0.07
SMAD3-214ENST00000560402 UPP2O95045 317 aa15.47■□□□□ 0.07
SMAD3-214ENST00000560402 HMGB1P09429 215 aaKnown RBP15.47■□□□□ 0.07
SMAD3-214ENST00000560402 ADCY7P51828 1080 aa15.47■□□□□ 0.07
SMAD3-214ENST00000560402 MRPS6P82932 125 aaKnown RBP15.47■□□□□ 0.07
SMAD3-214ENST00000560402 LPIN1Q14693 890 aa15.47■□□□□ 0.07
SMAD3-214ENST00000560402 LEXMQ3ZCV2 418 aa15.47■□□□□ 0.07
SMAD3-214ENST00000560402 DHX32Q7L7V1 743 aaKnown RBP15.47■□□□□ 0.07
SMAD3-214ENST00000560402 TMEM192Q8IY95 271 aa15.47■□□□□ 0.07
SMAD3-214ENST00000560402 FIBCD1Q8N539 461 aa15.47■□□□□ 0.07
SMAD3-214ENST00000560402 IL17RAQ96F46 866 aa15.47■□□□□ 0.07
SMAD3-214ENST00000560402 ANO3Q9BYT9 981 aa15.47■□□□□ 0.07
SMAD3-214ENST00000560402 OSBPL7Q9BZF2 842 aa15.47■□□□□ 0.07
SMAD3-214ENST00000560402 LMAN2LQ9H0V9 348 aa15.47■□□□□ 0.07
SMAD3-214ENST00000560402 KCNH7Q9NS40 1196 aa15.47■□□□□ 0.07
SMAD3-214ENST00000560402 CDY2AQ9Y6F7 541 aa15.47■□□□□ 0.07
SMAD3-214ENST00000560402 KIAA1671Q9BY89 1806 aa15.47■□□□□ 0.07
SMAD3-214ENST00000560402 GOLGA8AA7E2F4 631 aa15.46■□□□□ 0.07
SMAD3-214ENST00000560402 GOLGA8BA8MQT2 603 aa15.46■□□□□ 0.07
SMAD3-214ENST00000560402 C5orf67F2Z3F1 127 aa15.46■□□□□ 0.07
SMAD3-214ENST00000560402 M0QZ92 97 aa15.46■□□□□ 0.07
SMAD3-214ENST00000560402 RB1P06400 928 aa15.46■□□□□ 0.07
SMAD3-214ENST00000560402 SREBF1P36956 1147 aa15.46■□□□□ 0.07
SMAD3-214ENST00000560402 SLC26A2P50443 739 aa15.46■□□□□ 0.07
SMAD3-214ENST00000560402 EXOSC10Q01780 885 aaKnown RBP15.46■□□□□ 0.07
SMAD3-214ENST00000560402 FUT2Q10981 343 aa15.46■□□□□ 0.07
SMAD3-214ENST00000560402 GPM6BQ13491 265 aa15.46■□□□□ 0.07
SMAD3-214ENST00000560402 RABEP1Q15276 862 aa15.46■□□□□ 0.07
SMAD3-214ENST00000560402 PUS10Q3MIT2 529 aaKnown RBP15.46■□□□□ 0.07
SMAD3-214ENST00000560402 CEP55Q53EZ4 464 aa15.46■□□□□ 0.07
SMAD3-214ENST00000560402 FBXO47Q5MNV8 452 aa15.46■□□□□ 0.07
SMAD3-214ENST00000560402 NIPA1Q7RTP0 329 aa15.46■□□□□ 0.07
SMAD3-214ENST00000560402 PLPPR4Q7Z2D5 763 aa15.46■□□□□ 0.07
SMAD3-214ENST00000560402 FTHL17Q9BXU8 183 aa15.46■□□□□ 0.07
SMAD3-214ENST00000560402 RC3H2Q9HBD1 1191 aaKnown RBP15.46■□□□□ 0.07
SMAD3-214ENST00000560402 BARHL2Q9NY43 387 aa15.46■□□□□ 0.07
SMAD3-214ENST00000560402 PKD2L1Q9P0L9 805 aa15.46■□□□□ 0.07
SMAD3-214ENST00000560402 STXBP3O00186 592 aa15.45■□□□□ 0.06
SMAD3-214ENST00000560402 INSRRP14616 1297 aa15.45■□□□□ 0.06
SMAD3-214ENST00000560402 CTNNB1P35222 781 aa15.45■□□□□ 0.06
SMAD3-214ENST00000560402 ACTR2P61160 394 aa15.45■□□□□ 0.06
SMAD3-214ENST00000560402 MARCH8Q5T0T0 291 aa15.45■□□□□ 0.06
SMAD3-214ENST00000560402 IER5Q5VY09 327 aa15.45■□□□□ 0.06
SMAD3-214ENST00000560402 MCTP2Q6DN12 878 aa15.45■□□□□ 0.06
SMAD3-214ENST00000560402 TYW1BQ6NUM6 668 aa15.45■□□□□ 0.06
SMAD3-214ENST00000560402 BANK1Q8NDB2 785 aa15.45■□□□□ 0.06
SMAD3-214ENST00000560402 DNAJB3Q8WWF6 145 aa15.45■□□□□ 0.06
SMAD3-214ENST00000560402 SNX21Q969T3 373 aa15.45■□□□□ 0.06
SMAD3-214ENST00000560402 PCYT2Q99447 389 aa15.45■□□□□ 0.06
SMAD3-214ENST00000560402 C11orf84Q9BUA3 381 aaPredicted RBP15.45■□□□□ 0.06
SMAD3-214ENST00000560402 NSUN3Q9H649 340 aaKnown RBP15.45■□□□□ 0.06
SMAD3-214ENST00000560402 TRPC6Q9Y210 931 aa15.45■□□□□ 0.06
SMAD3-214ENST00000560402 TRPV2Q9Y5S1 764 aa15.45■□□□□ 0.06
SMAD3-214ENST00000560402 MYH9P35579 1960 aaKnown RBP15.45■□□□□ 0.06
SMAD3-214ENST00000560402 NID2Q14112 1375 aa15.45■□□□□ 0.06
SMAD3-214ENST00000560402 KDM3AQ9Y4C1 1321 aa15.44■□□□□ 0.06
SMAD3-214ENST00000560402 KLF18A0A0U1RQI7 1052 aa15.44■□□□□ 0.06
SMAD3-214ENST00000560402 CCDC196A0A1B0GTZ2 297 aa15.44■□□□□ 0.06
SMAD3-214ENST00000560402 KCNA5P22460 613 aa15.44■□□□□ 0.06
SMAD3-214ENST00000560402 CLK2P49760 499 aaKnown RBP15.44■□□□□ 0.06
SMAD3-214ENST00000560402 IGBP1P78318 339 aa15.44■□□□□ 0.06
SMAD3-214ENST00000560402 CLP1Q92989 425 aaKnown RBP15.44■□□□□ 0.06
SMAD3-214ENST00000560402 PABPC5Q96DU9 382 aaKnown RBP15.44■□□□□ 0.06
SMAD3-214ENST00000560402 BRPF3Q9ULD4 1205 aa15.44■□□□□ 0.06
SMAD3-214ENST00000560402 FAM50BQ9Y247 325 aa15.44■□□□□ 0.06
SMAD3-214ENST00000560402 SMIM35A0A1B0GVV1 85 aa15.43■□□□□ 0.06
SMAD3-214ENST00000560402 ESYT2A0FGR8 921 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms