RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 ATG7O95352 703 aa13.23□□□□□ -0.29
RABGGTA-216ENST00000560243 CXCL10P02778 98 aa13.23□□□□□ -0.29
RABGGTA-216ENST00000560243 CTSHP09668 335 aa13.23□□□□□ -0.29
RABGGTA-216ENST00000560243 MYOGP15173 224 aa13.23□□□□□ -0.29
RABGGTA-216ENST00000560243 GRIK4Q16099 956 aa13.23□□□□□ -0.29
RABGGTA-216ENST00000560243 MARCH8Q5T0T0 291 aa13.23□□□□□ -0.29
RABGGTA-216ENST00000560243 ABHD15Q6UXT9 468 aa13.23□□□□□ -0.29
RABGGTA-216ENST00000560243 OXER1Q8TDS5 423 aa13.23□□□□□ -0.29
RABGGTA-216ENST00000560243 TBCKQ8TEA7 893 aa13.23□□□□□ -0.29
RABGGTA-216ENST00000560243 TRAPPC12Q8WVT3 735 aa13.23□□□□□ -0.29
RABGGTA-216ENST00000560243 TIFAQ96CG3 184 aa13.23□□□□□ -0.29
RABGGTA-216ENST00000560243 PHF20Q9BVI0 1012 aa13.23□□□□□ -0.29
RABGGTA-216ENST00000560243 MTIF3Q9H2K0 278 aaKnown RBP13.23□□□□□ -0.29
RABGGTA-216ENST00000560243 YBX2Q9Y2T7 364 aaKnown RBP13.23□□□□□ -0.29
RABGGTA-216ENST00000560243 WDR81Q562E7 1941 aa13.23□□□□□ -0.29
RABGGTA-216ENST00000560243 PRUNE2Q8WUY3 3088 aa13.22□□□□□ -0.29
RABGGTA-216ENST00000560243 IGKV6D-21A0A0A0MT36 114 aa13.22□□□□□ -0.29
RABGGTA-216ENST00000560243 RSPH10B2B2RC85 870 aa13.22□□□□□ -0.29
RABGGTA-216ENST00000560243 MSH4O15457 936 aa13.22□□□□□ -0.29
RABGGTA-216ENST00000560243 TDP2O95551 362 aa13.22□□□□□ -0.29
RABGGTA-216ENST00000560243 RSPH10BP0C881 870 aa13.22□□□□□ -0.29
RABGGTA-216ENST00000560243 GNAT1P11488 350 aa13.22□□□□□ -0.29
RABGGTA-216ENST00000560243 INSRRP14616 1297 aa13.22□□□□□ -0.29
RABGGTA-216ENST00000560243 ATP2A2P16615 1042 aaKnown RBP13.22□□□□□ -0.29
RABGGTA-216ENST00000560243 STAT5BP51692 787 aa13.22□□□□□ -0.29
RABGGTA-216ENST00000560243 USP11P51784 963 aa13.22□□□□□ -0.29
RABGGTA-216ENST00000560243 IGBP1P78318 339 aa13.22□□□□□ -0.29
RABGGTA-216ENST00000560243 SETQ01105 290 aaPredicted RBP13.22□□□□□ -0.29
RABGGTA-216ENST00000560243 PLCB4Q15147 1175 aa13.22□□□□□ -0.29
RABGGTA-216ENST00000560243 TMCO2Q7Z6W1 182 aaPredicted RBP13.22□□□□□ -0.29
RABGGTA-216ENST00000560243 CCDC60Q8IWA6 550 aaPredicted RBP13.22□□□□□ -0.29
RABGGTA-216ENST00000560243 NSUN7Q8NE18 718 aaKnown RBP13.22□□□□□ -0.29
RABGGTA-216ENST00000560243 CDX2Q99626 313 aaPredicted RBP13.22□□□□□ -0.29
RABGGTA-216ENST00000560243 AZI2Q9H6S1 392 aa13.22□□□□□ -0.29
RABGGTA-216ENST00000560243 MYH9P35579 1960 aaKnown RBP13.21□□□□□ -0.29
RABGGTA-216ENST00000560243 SIP14410 1827 aa13.21□□□□□ -0.29
RABGGTA-216ENST00000560243 A0A0C4DFX4 3053 aa13.21□□□□□ -0.29
RABGGTA-216ENST00000560243 MBLAC1A4D2B0 266 aaPredicted RBP13.21□□□□□ -0.29
RABGGTA-216ENST00000560243 BACH1O14867 736 aa13.21□□□□□ -0.29
RABGGTA-216ENST00000560243 ACTN1P12814 892 aa13.21□□□□□ -0.29
RABGGTA-216ENST00000560243 FOSBP53539 338 aa13.21□□□□□ -0.29
RABGGTA-216ENST00000560243 GRIN2CQ14957 1233 aa13.21□□□□□ -0.29
RABGGTA-216ENST00000560243 INF2Q27J81 1249 aa13.21□□□□□ -0.29
RABGGTA-216ENST00000560243 GALNT17Q6IS24 598 aa13.21□□□□□ -0.29
RABGGTA-216ENST00000560243 SWSAP1Q6NVH7 229 aa13.21□□□□□ -0.29
RABGGTA-216ENST00000560243 PLPPR4Q7Z2D5 763 aa13.21□□□□□ -0.29
RABGGTA-216ENST00000560243 MYLIPQ8WY64 445 aa13.21□□□□□ -0.29
RABGGTA-216ENST00000560243 C22orf23Q9BZE7 217 aa13.21□□□□□ -0.29
RABGGTA-216ENST00000560243 NKX2-4Q9H2Z4 354 aa13.21□□□□□ -0.29
RABGGTA-216ENST00000560243 ZNF576Q9H609 170 aa13.21□□□□□ -0.29
RABGGTA-216ENST00000560243 TUBE1Q9UJT0 475 aa13.21□□□□□ -0.29
RABGGTA-216ENST00000560243 TRPC6Q9Y210 931 aa13.21□□□□□ -0.29
RABGGTA-216ENST00000560243 TRANK1O15050 2925 aa13.2□□□□□ -0.3
RABGGTA-216ENST00000560243 POTEB3A0JP26 581 aa13.2□□□□□ -0.3
RABGGTA-216ENST00000560243 FAM205CA6NFA0 338 aa13.2□□□□□ -0.3
RABGGTA-216ENST00000560243 CHRNA1P02708 482 aa13.2□□□□□ -0.3
RABGGTA-216ENST00000560243 ATP4AP20648 1035 aa13.2□□□□□ -0.3
RABGGTA-216ENST00000560243 WDR5P61964 334 aaKnown RBP13.2□□□□□ -0.3
RABGGTA-216ENST00000560243 DEFB103AP81534 67 aa13.2□□□□□ -0.3
RABGGTA-216ENST00000560243 EARS2Q5JPH6 523 aaKnown RBP13.2□□□□□ -0.3
RABGGTA-216ENST00000560243 ZNF746Q6NUN9 644 aaPredicted RBP13.2□□□□□ -0.3
RABGGTA-216ENST00000560243 CNKSR3Q6P9H4 555 aa13.2□□□□□ -0.3
RABGGTA-216ENST00000560243 POTEBQ6S5H4 581 aa13.2□□□□□ -0.3
RABGGTA-216ENST00000560243 FAM177A1Q8N128 213 aaPredicted RBP13.2□□□□□ -0.3
RABGGTA-216ENST00000560243 DBF4BQ8NFT6 615 aa13.2□□□□□ -0.3
RABGGTA-216ENST00000560243 DNAJB3Q8WWF6 145 aa13.2□□□□□ -0.3
RABGGTA-216ENST00000560243 SLC5A5Q92911 643 aa13.2□□□□□ -0.3
RABGGTA-216ENST00000560243 TBC1D22BQ9NU19 505 aa13.2□□□□□ -0.3
RABGGTA-216ENST00000560243 LIMCH1Q9UPQ0 1083 aa13.2□□□□□ -0.3
RABGGTA-216ENST00000560243 STXBP5LQ9Y2K9 1186 aa13.2□□□□□ -0.3
RABGGTA-216ENST00000560243 MICAL3Q7RTP6 2002 aa13.19□□□□□ -0.3
RABGGTA-216ENST00000560243 EVPLQ92817 2033 aa13.19□□□□□ -0.3
RABGGTA-216ENST00000560243 TMEM265A0A087WTH1 108 aa13.19□□□□□ -0.3
RABGGTA-216ENST00000560243 CYP3A7-CYP3A51PA0A087WV96 503 aa13.19□□□□□ -0.3
RABGGTA-216ENST00000560243 ZBTB42B2RXF5 422 aa13.19□□□□□ -0.3
RABGGTA-216ENST00000560243 SLC37A4O43826 429 aa13.19□□□□□ -0.3
RABGGTA-216ENST00000560243 BAIAP3O94812 1187 aa13.19□□□□□ -0.3
RABGGTA-216ENST00000560243 ARHGEF15O94989 841 aa13.19□□□□□ -0.3
RABGGTA-216ENST00000560243 PARNO95453 639 aaKnown RBP13.19□□□□□ -0.3
RABGGTA-216ENST00000560243 CYP3A7P24462 503 aa13.19□□□□□ -0.3
RABGGTA-216ENST00000560243 RBM25P49756 843 aaKnown RBP13.19□□□□□ -0.3
RABGGTA-216ENST00000560243 NR5A1Q13285 461 aa13.19□□□□□ -0.3
RABGGTA-216ENST00000560243 NONOQ15233 471 aaKnown RBP eCLIP13.19□□□□□ -0.3
RABGGTA-216ENST00000560243 RAB30Q15771 203 aa13.19□□□□□ -0.3
RABGGTA-216ENST00000560243 Q4G0T1 1027 aa13.19□□□□□ -0.3
RABGGTA-216ENST00000560243 PLEKHG4Q58EX7 1191 aa13.19□□□□□ -0.3
RABGGTA-216ENST00000560243 FAM26DQ5JW98 314 aa13.19□□□□□ -0.3
RABGGTA-216ENST00000560243 MIS18BP1Q6P0N0 1132 aa13.19□□□□□ -0.3
RABGGTA-216ENST00000560243 PDXDC2PQ6P474 469 aa13.19□□□□□ -0.3
RABGGTA-216ENST00000560243 TRMT1LQ7Z2T5 733 aaKnown RBP13.19□□□□□ -0.3
RABGGTA-216ENST00000560243 KRT25Q7Z3Z0 450 aa13.19□□□□□ -0.3
RABGGTA-216ENST00000560243 HERC6Q8IVU3 1022 aa13.19□□□□□ -0.3
RABGGTA-216ENST00000560243 CCDC83Q8IWF9 413 aa13.19□□□□□ -0.3
RABGGTA-216ENST00000560243 MBOAT7Q96N66 472 aa13.19□□□□□ -0.3
RABGGTA-216ENST00000560243 FAM49AQ9H0Q0 323 aaPredicted RBP13.19□□□□□ -0.3
RABGGTA-216ENST00000560243 UNC45AQ9H3U1 944 aa13.19□□□□□ -0.3
RABGGTA-216ENST00000560243 ZNF302Q9NR11 478 aa13.19□□□□□ -0.3
RABGGTA-216ENST00000560243 MSRAQ9UJ68 235 aa13.19□□□□□ -0.3
RABGGTA-216ENST00000560243 LOXHD1Q8IVV2 1947 aa13.18□□□□□ -0.3
RABGGTA-216ENST00000560243 CCDC194A0A1B0GVG4 234 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms