RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 CCDC12Q8WUD4 166 aaPredicted RBP26.46■■□□□ 1.83
CRNDE-209ENST00000560208 COL25A1Q9BXS0 654 aaPredicted RBP26.46■■□□□ 1.83
CRNDE-209ENST00000560208 SLC26A6Q9BXS9 759 aa26.46■■□□□ 1.83
CRNDE-209ENST00000560208 ZMYND12Q9H0C1 365 aa26.46■■□□□ 1.83
CRNDE-209ENST00000560208 AGO4Q9HCK5 861 aaKnown RBP26.46■■□□□ 1.83
CRNDE-209ENST00000560208 C6orf50Q9HD87 102 aa26.46■■□□□ 1.83
CRNDE-209ENST00000560208 VCANP13611 3396 aa26.45■■□□□ 1.83
CRNDE-209ENST00000560208 ESYT2A0FGR8 921 aa26.45■■□□□ 1.82
CRNDE-209ENST00000560208 RFXAPO00287 272 aa26.45■■□□□ 1.82
CRNDE-209ENST00000560208 GJB5O95377 273 aa26.45■■□□□ 1.82
CRNDE-209ENST00000560208 CCDC85BQ15834 202 aaPredicted RBP26.45■■□□□ 1.82
CRNDE-209ENST00000560208 NTRK3Q16288 839 aa26.45■■□□□ 1.82
CRNDE-209ENST00000560208 PCYT2Q99447 389 aa26.45■■□□□ 1.82
CRNDE-209ENST00000560208 LCHNA4D1U4 455 aa26.44■■□□□ 1.82
CRNDE-209ENST00000560208 ACTR2P61160 394 aa26.44■■□□□ 1.82
CRNDE-209ENST00000560208 SCRN1Q12765 414 aa26.44■■□□□ 1.82
CRNDE-209ENST00000560208 ITGB3BPQ13352 177 aaPredicted RBP26.44■■□□□ 1.82
CRNDE-209ENST00000560208 GRIK4Q16099 956 aa26.44■■□□□ 1.82
CRNDE-209ENST00000560208 FAM26DQ5JW98 314 aa26.44■■□□□ 1.82
CRNDE-209ENST00000560208 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.44■■□□□ 1.82
CRNDE-209ENST00000560208 NIPA1Q7RTP0 329 aa26.44■■□□□ 1.82
CRNDE-209ENST00000560208 ARNTL2Q8WYA1 636 aa26.44■■□□□ 1.82
CRNDE-209ENST00000560208 RAD9AQ99638 391 aa26.44■■□□□ 1.82
CRNDE-209ENST00000560208 OSBPL7Q9BZF2 842 aa26.44■■□□□ 1.82
CRNDE-209ENST00000560208 AZI2Q9H6S1 392 aa26.44■■□□□ 1.82
CRNDE-209ENST00000560208 PRRC2BQ5JSZ5 2229 aaKnown RBP26.44■■□□□ 1.82
CRNDE-209ENST00000560208 ADAMTS3O15072 1205 aa26.43■■□□□ 1.82
CRNDE-209ENST00000560208 LARGE1O95461 756 aa26.43■■□□□ 1.82
CRNDE-209ENST00000560208 IFNAR1P17181 557 aa26.43■■□□□ 1.82
CRNDE-209ENST00000560208 MCTP2Q6DN12 878 aa26.43■■□□□ 1.82
CRNDE-209ENST00000560208 TAF2Q6P1X5 1199 aa26.43■■□□□ 1.82
CRNDE-209ENST00000560208 RUFY4Q6ZNE9 571 aa26.43■■□□□ 1.82
CRNDE-209ENST00000560208 REXO1Q8N1G1 1221 aaKnown RBP26.43■■□□□ 1.82
CRNDE-209ENST00000560208 SEPT8Q92599 483 aa26.43■■□□□ 1.82
CRNDE-209ENST00000560208 TBC1D32Q96NH3 1257 aa26.43■■□□□ 1.82
CRNDE-209ENST00000560208 RNF26Q9BY78 433 aaPredicted RBP26.43■■□□□ 1.82
CRNDE-209ENST00000560208 PRDM6Q9NQX0 595 aa26.43■■□□□ 1.82
CRNDE-209ENST00000560208 EPOPA6NHQ4 379 aa26.42■■□□□ 1.82
CRNDE-209ENST00000560208 GNA11P29992 359 aa26.42■■□□□ 1.82
CRNDE-209ENST00000560208 MKRN4PQ13434 485 aaPredicted RBP26.42■■□□□ 1.82
CRNDE-209ENST00000560208 FAM117BQ6P1L5 589 aa26.42■■□□□ 1.82
CRNDE-209ENST00000560208 CPLX2Q6PUV4 134 aaKnown RBP26.42■■□□□ 1.82
CRNDE-209ENST00000560208 RPAINQ86UA6 219 aa26.42■■□□□ 1.82
CRNDE-209ENST00000560208 PLA2G4DQ86XP0 818 aa26.42■■□□□ 1.82
CRNDE-209ENST00000560208 NECAB1Q8N987 351 aa26.42■■□□□ 1.82
CRNDE-209ENST00000560208 CRYGNQ8WXF5 182 aa26.42■■□□□ 1.82
CRNDE-209ENST00000560208 TUBE1Q9UJT0 475 aa26.42■■□□□ 1.82
CRNDE-209ENST00000560208 MBLAC1A4D2B0 266 aaPredicted RBP26.41■■□□□ 1.82
CRNDE-209ENST00000560208 FAM86B1E9PN63 330 aa26.41■■□□□ 1.82
CRNDE-209ENST00000560208 PFKFB2O60825 505 aa26.41■■□□□ 1.82
CRNDE-209ENST00000560208 DTNBO60941 627 aa26.41■■□□□ 1.82
CRNDE-209ENST00000560208 AMHP03971 560 aa26.41■■□□□ 1.82
CRNDE-209ENST00000560208 CYP3A4P08684 503 aa26.41■■□□□ 1.82
CRNDE-209ENST00000560208 FAM86B2P0C5J1 330 aa26.41■■□□□ 1.82
CRNDE-209ENST00000560208 SSRP1Q08945 709 aaKnown RBP26.41■■□□□ 1.82
CRNDE-209ENST00000560208 RABEP1Q15276 862 aa26.41■■□□□ 1.82
CRNDE-209ENST00000560208 ME3Q16798 604 aa26.41■■□□□ 1.82
CRNDE-209ENST00000560208 MARCH8Q5T0T0 291 aa26.41■■□□□ 1.82
CRNDE-209ENST00000560208 SPRED2Q7Z698 418 aa26.41■■□□□ 1.82
CRNDE-209ENST00000560208 RRN3P2A6NIE6 340 aa26.4■■□□□ 1.82
CRNDE-209ENST00000560208 CHRNA1P02708 482 aa26.4■■□□□ 1.82
CRNDE-209ENST00000560208 INSRRP14616 1297 aa26.4■■□□□ 1.82
CRNDE-209ENST00000560208 STAT5BP51692 787 aa26.4■■□□□ 1.82
CRNDE-209ENST00000560208 IGBP1P78318 339 aa26.4■■□□□ 1.82
CRNDE-209ENST00000560208 PLPPR4Q7Z2D5 763 aa26.4■■□□□ 1.82
CRNDE-209ENST00000560208 RSPH3Q86UC2 560 aa26.4■■□□□ 1.82
CRNDE-209ENST00000560208 TRIM22Q8IYM9 498 aa26.4■■□□□ 1.82
CRNDE-209ENST00000560208 MYOCDQ8IZQ8 938 aa26.4■■□□□ 1.82
CRNDE-209ENST00000560208 MICALL1Q8N3F8 863 aa26.4■■□□□ 1.82
CRNDE-209ENST00000560208 TNPO1Q92973 898 aaKnown RBP26.4■■□□□ 1.82
CRNDE-209ENST00000560208 SIP14410 1827 aa26.39■■□□□ 1.82
CRNDE-209ENST00000560208 IGLV3-22A0A075B6J6 115 aa26.39■■□□□ 1.82
CRNDE-209ENST00000560208 GTPBP6O43824 516 aaPredicted RBP26.39■■□□□ 1.82
CRNDE-209ENST00000560208 ATG7O95352 703 aa26.39■■□□□ 1.82
CRNDE-209ENST00000560208 POU3F3P20264 500 aaPredicted RBP26.39■■□□□ 1.82
CRNDE-209ENST00000560208 CCDC148Q8NFR7 591 aa26.39■■□□□ 1.82
CRNDE-209ENST00000560208 BICD2Q8TD16 824 aa26.39■■□□□ 1.82
CRNDE-209ENST00000560208 DNAJB3Q8WWF6 145 aa26.39■■□□□ 1.82
CRNDE-209ENST00000560208 TRPC6Q9Y210 931 aa26.39■■□□□ 1.82
CRNDE-209ENST00000560208 MTCH2Q9Y6C9 303 aa26.39■■□□□ 1.82
CRNDE-209ENST00000560208 DDX39AO00148 427 aaKnown RBP26.38■■□□□ 1.81
CRNDE-209ENST00000560208 CCNE2O96020 404 aa26.38■■□□□ 1.81
CRNDE-209ENST00000560208 PLCB4Q15147 1175 aa26.38■■□□□ 1.81
CRNDE-209ENST00000560208 RASGRP4Q8TDF6 673 aa26.38■■□□□ 1.81
CRNDE-209ENST00000560208 APBB2Q92870 758 aa26.38■■□□□ 1.81
CRNDE-209ENST00000560208 IFIH1Q9BYX4 1025 aaKnown RBP26.38■■□□□ 1.81
CRNDE-209ENST00000560208 VPS54Q9P1Q0 977 aa26.38■■□□□ 1.81
CRNDE-209ENST00000560208 INSL6Q9Y581 213 aa26.38■■□□□ 1.81
CRNDE-209ENST00000560208 MYH9P35579 1960 aaKnown RBP26.38■■□□□ 1.81
CRNDE-209ENST00000560208 IPO5O00410 1097 aaKnown RBP26.37■■□□□ 1.81
CRNDE-209ENST00000560208 MGAT3Q09327 533 aa26.37■■□□□ 1.81
CRNDE-209ENST00000560208 ZBTB10Q96DT7 871 aa26.37■■□□□ 1.81
CRNDE-209ENST00000560208 UIMC1Q96RL1 719 aa26.37■■□□□ 1.81
CRNDE-209ENST00000560208 THEGQ9P2T0 379 aa26.37■■□□□ 1.81
CRNDE-209ENST00000560208 LIMCH1Q9UPQ0 1083 aa26.37■■□□□ 1.81
CRNDE-209ENST00000560208 LOXHD1Q8IVV2 1947 aa26.37■■□□□ 1.81
CRNDE-209ENST00000560208 TTC28Q96AY4 2481 aa26.36■■□□□ 1.81
CRNDE-209ENST00000560208 LINC01553A4QN01 128 aa26.36■■□□□ 1.81
CRNDE-209ENST00000560208 DHX15O43143 795 aaKnown RBP26.36■■□□□ 1.81
CRNDE-209ENST00000560208 CDKL5O76039 1030 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms