RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 IMPACTQ9P2X3 320 aa16.09■□□□□ 0.17
ZEB1-218ENST00000560196 PCDHA2Q9Y5H9 948 aa16.09■□□□□ 0.17
ZEB1-218ENST00000560196 LOXHD1Q8IVV2 1947 aa16.08■□□□□ 0.16
ZEB1-218ENST00000560196 LRRC10BA6NIK2 292 aa16.08■□□□□ 0.16
ZEB1-218ENST00000560196 DDX39AO00148 427 aaKnown RBP16.08■□□□□ 0.16
ZEB1-218ENST00000560196 DKC1O60832 514 aaKnown RBP eCLIP16.08■□□□□ 0.16
ZEB1-218ENST00000560196 KIF20AO95235 890 aa16.08■□□□□ 0.16
ZEB1-218ENST00000560196 CCNE2O96020 404 aa16.08■□□□□ 0.16
ZEB1-218ENST00000560196 KRT18P05783 430 aaKnown RBP16.08■□□□□ 0.16
ZEB1-218ENST00000560196 CYP2C8P10632 490 aa16.08■□□□□ 0.16
ZEB1-218ENST00000560196 GAP43P17677 238 aa16.08■□□□□ 0.16
ZEB1-218ENST00000560196 CDK11BP21127 795 aaKnown RBP16.08■□□□□ 0.16
ZEB1-218ENST00000560196 HUNKP57058 714 aa16.08■□□□□ 0.16
ZEB1-218ENST00000560196 PSMC5P62195 406 aa16.08■□□□□ 0.16
ZEB1-218ENST00000560196 SMCR8Q8TEV9 937 aaPredicted RBP16.08■□□□□ 0.16
ZEB1-218ENST00000560196 FGD4Q96M96 766 aa16.08■□□□□ 0.16
ZEB1-218ENST00000560196 CTAGE1Q96RT6 745 aa16.08■□□□□ 0.16
ZEB1-218ENST00000560196 PARK7Q99497 189 aaKnown RBP16.08■□□□□ 0.16
ZEB1-218ENST00000560196 SLC39A2Q9NP94 309 aa16.08■□□□□ 0.16
ZEB1-218ENST00000560196 WRAP73Q9P2S5 460 aaPredicted RBP16.08■□□□□ 0.16
ZEB1-218ENST00000560196 LIMA1Q9UHB6 759 aaKnown RBP16.08■□□□□ 0.16
ZEB1-218ENST00000560196 MAPK8IP1Q9UQF2 711 aa16.08■□□□□ 0.16
ZEB1-218ENST00000560196 PCDHA10Q9Y5I2 948 aa16.08■□□□□ 0.16
ZEB1-218ENST00000560196 COL4A3BPQ9Y5P4 624 aa16.08■□□□□ 0.16
ZEB1-218ENST00000560196 TGFB3P10600 412 aa16.07■□□□□ 0.16
ZEB1-218ENST00000560196 GUCY2CP25092 1073 aa16.07■□□□□ 0.16
ZEB1-218ENST00000560196 APTXQ7Z2E3 356 aaKnown RBP16.07■□□□□ 0.16
ZEB1-218ENST00000560196 RASAL3Q86YV0 1011 aa16.07■□□□□ 0.16
ZEB1-218ENST00000560196 DRC7Q8IY82 874 aa16.07■□□□□ 0.16
ZEB1-218ENST00000560196 PIGOQ8TEQ8 1089 aa16.07■□□□□ 0.16
ZEB1-218ENST00000560196 DUSP9Q99956 384 aaKnown RBP16.07■□□□□ 0.16
ZEB1-218ENST00000560196 REEP2Q9BRK0 252 aa16.07■□□□□ 0.16
ZEB1-218ENST00000560196 RUSC1Q9BVN2 902 aa16.07■□□□□ 0.16
ZEB1-218ENST00000560196 ANKEF1Q9NU02 776 aa16.07■□□□□ 0.16
ZEB1-218ENST00000560196 ODF2LQ9ULJ1 636 aa16.07■□□□□ 0.16
ZEB1-218ENST00000560196 PASKQ96RG2 1323 aa16.07■□□□□ 0.16
ZEB1-218ENST00000560196 NPHP3-ACAD11A0A0J9YXS1 232 aa16.06■□□□□ 0.16
ZEB1-218ENST00000560196 A0A1B0GTH6 734 aa16.06■□□□□ 0.16
ZEB1-218ENST00000560196 MANSC4A6NHS7 340 aaPredicted RBP16.06■□□□□ 0.16
ZEB1-218ENST00000560196 PMS1P54277 932 aaKnown RBP16.06■□□□□ 0.16
ZEB1-218ENST00000560196 LRRC63Q05C16 580 aa16.06■□□□□ 0.16
ZEB1-218ENST00000560196 HERC4Q5GLZ8 1057 aaPredicted RBP16.06■□□□□ 0.16
ZEB1-218ENST00000560196 KCNV1Q6PIU1 500 aa16.06■□□□□ 0.16
ZEB1-218ENST00000560196 ZSCAN30Q86W11 494 aa16.06■□□□□ 0.16
ZEB1-218ENST00000560196 MYOCDQ8IZQ8 938 aa16.06■□□□□ 0.16
ZEB1-218ENST00000560196 FAM43AQ8N2R8 423 aa16.06■□□□□ 0.16
ZEB1-218ENST00000560196 SPC24Q8NBT2 197 aa16.06■□□□□ 0.16
ZEB1-218ENST00000560196 BANK1Q8NDB2 785 aa16.06■□□□□ 0.16
ZEB1-218ENST00000560196 HPS3Q969F9 1004 aa16.06■□□□□ 0.16
ZEB1-218ENST00000560196 TIPINQ9BVW5 301 aa16.06■□□□□ 0.16
ZEB1-218ENST00000560196 R3HDMLQ9H3Y0 253 aa16.06■□□□□ 0.16
ZEB1-218ENST00000560196 JPH1Q9HDC5 661 aaPredicted RBP16.06■□□□□ 0.16
ZEB1-218ENST00000560196 SEL1LQ9UBV2 794 aa16.06■□□□□ 0.16
ZEB1-218ENST00000560196 SLC9A2Q9UBY0 812 aa16.06■□□□□ 0.16
ZEB1-218ENST00000560196 SAMM50Q9Y512 469 aa16.06■□□□□ 0.16
ZEB1-218ENST00000560196 ARHGEF35A5YM69 484 aa16.05■□□□□ 0.16
ZEB1-218ENST00000560196 STRNO43815 780 aa16.05■□□□□ 0.16
ZEB1-218ENST00000560196 TBCAO75347 108 aaKnown RBP16.05■□□□□ 0.16
ZEB1-218ENST00000560196 ATG7O95352 703 aa16.05■□□□□ 0.16
ZEB1-218ENST00000560196 PSAPP07602 524 aa16.05■□□□□ 0.16
ZEB1-218ENST00000560196 EEF1GP26641 437 aaKnown RBP16.05■□□□□ 0.16
ZEB1-218ENST00000560196 ZNF131P52739 623 aa16.05■□□□□ 0.16
ZEB1-218ENST00000560196 GSDMDP57764 484 aa16.05■□□□□ 0.16
ZEB1-218ENST00000560196 NR1I3Q14994 352 aa16.05■□□□□ 0.16
ZEB1-218ENST00000560196 FAM110CQ1W6H9 321 aa16.05■□□□□ 0.16
ZEB1-218ENST00000560196 TCP11X2Q5H9J9 407 aa16.05■□□□□ 0.16
ZEB1-218ENST00000560196 ANKRD40Q6AI12 368 aa16.05■□□□□ 0.16
ZEB1-218ENST00000560196 FAM114A1Q8IWE2 563 aa16.05■□□□□ 0.16
ZEB1-218ENST00000560196 ANKRD20A12PQ8NF67 263 aa16.05■□□□□ 0.16
ZEB1-218ENST00000560196 ZNF526Q8TF50 670 aaPredicted RBP16.05■□□□□ 0.16
ZEB1-218ENST00000560196 ATP6V0A1Q93050 837 aa16.05■□□□□ 0.16
ZEB1-218ENST00000560196 TRIM47Q96LD4 638 aa16.05■□□□□ 0.16
ZEB1-218ENST00000560196 NAP1L5Q96NT1 182 aaPredicted RBP16.05■□□□□ 0.16
ZEB1-218ENST00000560196 PTPN18Q99952 460 aa16.05■□□□□ 0.16
ZEB1-218ENST00000560196 PORCNQ9H237 461 aa16.05■□□□□ 0.16
ZEB1-218ENST00000560196 SEMA6BQ9H3T3 888 aa16.05■□□□□ 0.16
ZEB1-218ENST00000560196 OLFML3Q9NRN5 406 aa16.05■□□□□ 0.16
ZEB1-218ENST00000560196 ZKSCAN5Q9Y2L8 839 aa16.05■□□□□ 0.16
ZEB1-218ENST00000560196 LRRC37A2A6NM11 1700 aa16.05■□□□□ 0.16
ZEB1-218ENST00000560196 KIAA1217Q5T5P2 1943 aa16.04■□□□□ 0.16
ZEB1-218ENST00000560196 TRIM49BA6NDI0 452 aa16.04■□□□□ 0.16
ZEB1-218ENST00000560196 ASB14A6NK59 587 aa16.04■□□□□ 0.16
ZEB1-218ENST00000560196 ESPNB1AK53 854 aa16.04■□□□□ 0.16
ZEB1-218ENST00000560196 FGFR1OPO95684 399 aaKnown RBP16.04■□□□□ 0.16
ZEB1-218ENST00000560196 RARRES1P49788 294 aa16.04■□□□□ 0.16
ZEB1-218ENST00000560196 FSTL1Q12841 308 aa16.04■□□□□ 0.16
ZEB1-218ENST00000560196 MKRN3Q13064 507 aaKnown RBP16.04■□□□□ 0.16
ZEB1-218ENST00000560196 NEDD9Q14511 834 aa16.04■□□□□ 0.16
ZEB1-218ENST00000560196 BMT2Q1RMZ1 405 aa16.04■□□□□ 0.16
ZEB1-218ENST00000560196 FILIP1LQ4L180 1135 aa16.04■□□□□ 0.16
ZEB1-218ENST00000560196 ZCWPW2Q504Y3 356 aa16.04■□□□□ 0.16
ZEB1-218ENST00000560196 RGMBQ6NW40 437 aa16.04■□□□□ 0.16
ZEB1-218ENST00000560196 ABHD15Q6UXT9 468 aa16.04■□□□□ 0.16
ZEB1-218ENST00000560196 EPM2AIP1Q7L775 607 aaPredicted RBP16.04■□□□□ 0.16
ZEB1-218ENST00000560196 ZNF467Q7Z7K2 595 aaPredicted RBP16.04■□□□□ 0.16
ZEB1-218ENST00000560196 SAPCD2Q86UD0 394 aa16.04■□□□□ 0.16
ZEB1-218ENST00000560196 SFR1Q86XK3 245 aa16.04■□□□□ 0.16
ZEB1-218ENST00000560196 IRF2BP1Q8IU81 584 aa16.04■□□□□ 0.16
ZEB1-218ENST00000560196 VSTM4Q8IW00 320 aa16.04■□□□□ 0.16
ZEB1-218ENST00000560196 CSGALNACT2Q8N6G5 542 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms