RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 KCNMA1Q12791 1236 aa8.92□□□□□ -0.98
SMAD3-212ENST00000559937 KNOP1Q1ED39 458 aaKnown RBP8.92□□□□□ -0.98
SMAD3-212ENST00000559937 FAM83BQ5T0W9 1011 aa8.92□□□□□ -0.98
SMAD3-212ENST00000559937 WDR93Q6P2C0 686 aa8.92□□□□□ -0.98
SMAD3-212ENST00000559937 NIPA1Q7RTP0 329 aa8.92□□□□□ -0.98
SMAD3-212ENST00000559937 ZNF572Q7Z3I7 529 aaPredicted RBP8.92□□□□□ -0.98
SMAD3-212ENST00000559937 KRT26Q7Z3Y9 468 aa8.92□□□□□ -0.98
SMAD3-212ENST00000559937 LARGE2Q8N3Y3 721 aa8.92□□□□□ -0.98
SMAD3-212ENST00000559937 GLIS3Q8NEA6 775 aa8.92□□□□□ -0.98
SMAD3-212ENST00000559937 EIF2AK1Q9BQI3 630 aaKnown RBP8.92□□□□□ -0.98
SMAD3-212ENST00000559937 REEP2Q9BRK0 252 aa8.92□□□□□ -0.98
SMAD3-212ENST00000559937 IFIH1Q9BYX4 1025 aaKnown RBP8.92□□□□□ -0.98
SMAD3-212ENST00000559937 UBXN6Q9BZV1 441 aa8.92□□□□□ -0.98
SMAD3-212ENST00000559937 TANGO6Q9C0B7 1094 aa8.92□□□□□ -0.98
SMAD3-212ENST00000559937 ANKZF1Q9H8Y5 726 aa8.92□□□□□ -0.98
SMAD3-212ENST00000559937 FAM207AQ9NSI2 230 aaPredicted RBP8.92□□□□□ -0.98
SMAD3-212ENST00000559937 TYW1Q9NV66 732 aaKnown RBP8.92□□□□□ -0.98
SMAD3-212ENST00000559937 MAP3K20Q9NYL2 800 aaKnown RBP8.92□□□□□ -0.98
SMAD3-212ENST00000559937 KCND2Q9NZV8 630 aa8.92□□□□□ -0.98
SMAD3-212ENST00000559937 PUF60Q9UHX1 559 aaKnown RBP8.92□□□□□ -0.98
SMAD3-212ENST00000559937 FBXL5Q9UKA1 691 aa8.92□□□□□ -0.98
SMAD3-212ENST00000559937 PNMA2Q9UL42 364 aa8.92□□□□□ -0.98
SMAD3-212ENST00000559937 ZNRF3Q9ULT6 936 aa8.92□□□□□ -0.98
SMAD3-212ENST00000559937 ARID2Q68CP9 1835 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 TARSL2A2RTX5 802 aaKnown RBP8.91□□□□□ -0.98
SMAD3-212ENST00000559937 GTPBP10A4D1E9 387 aaKnown RBP8.91□□□□□ -0.98
SMAD3-212ENST00000559937 ZNF263O14978 683 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 EPHB6O15197 1021 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 AKR1B10O60218 316 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 ASNSP08243 561 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 BCRP11274 1271 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 PLA2G4AP47712 749 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 PRELPP51888 382 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 SNAP25P60880 206 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 PABPC4Q13310 644 aaKnown RBP eCLIP8.91□□□□□ -0.98
SMAD3-212ENST00000559937 ADAM9Q13443 819 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 ASTE1Q2TB18 679 aaPredicted RBP8.91□□□□□ -0.98
SMAD3-212ENST00000559937 SLC9C1Q4G0N8 1177 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 C10orf76Q5T2E6 689 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 SFMBT2Q5VUG0 894 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 LRCH2Q5VUJ6 765 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 HGSNATQ68CP4 663 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 STXBP4Q6ZWJ1 553 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 RRAGAQ7L523 313 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 SFR1Q86XK3 245 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 NELFCDQ8IXH7 590 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 NIM1KQ8IY84 436 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 RNF10Q8N5U6 811 aaKnown RBP8.91□□□□□ -0.98
SMAD3-212ENST00000559937 NLGN2Q8NFZ4 835 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 ACER1Q8TDN7 264 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 GJA10Q969M2 543 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 ALS2CR12Q96Q35 445 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 HSD17B14Q9BPX1 270 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 MKNK1Q9BUB5 465 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 LSM14BQ9BX40 385 aaKnown RBP8.91□□□□□ -0.98
SMAD3-212ENST00000559937 FGFBP2Q9BYJ0 223 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 LACRTQ9GZZ8 138 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 GANQ9H2C0 597 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 DEF6Q9H4E7 631 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 AIPL1Q9NZN9 384 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 TRIM10Q9UDY6 481 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 ARMCX3Q9UH62 379 aaPredicted RBP8.91□□□□□ -0.98
SMAD3-212ENST00000559937 PGAP2Q9UHJ9 254 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 TSKSQ9UJT2 592 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 ODF2LQ9ULJ1 636 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 JRKLQ9Y4A0 524 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 PCDHA13Q9Y5I0 950 aa8.91□□□□□ -0.98
SMAD3-212ENST00000559937 BZW2Q9Y6E2 419 aaKnown RBP8.91□□□□□ -0.98
SMAD3-212ENST00000559937 RPTORQ8N122 1335 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 NPHP3-ACAD11A0A0J9YXS1 232 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 CLRN2A0PK11 232 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 RCCD1A6NED2 376 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 BTNL10A8MVZ5 291 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 MEIS1O00470 390 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 MAP2K7O14733 419 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 WDR46O15213 610 aaKnown RBP8.9□□□□□ -0.98
SMAD3-212ENST00000559937 NKRFO15226 690 aaKnown RBP eCLIP8.9□□□□□ -0.985e-6■□□□□ 8.8
SMAD3-212ENST00000559937 RAD17O75943 681 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 NOL4O94818 638 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 AFPP02771 609 aaKnown RBP8.9□□□□□ -0.98
SMAD3-212ENST00000559937 ATP1A1P05023 1023 aaKnown RBP8.9□□□□□ -0.98
SMAD3-212ENST00000559937 FDX1P10109 184 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 TCP1P17987 556 aaKnown RBP8.9□□□□□ -0.98
SMAD3-212ENST00000559937 NR2F2P24468 414 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 HOXA13P31271 388 aaPredicted RBP8.9□□□□□ -0.98
SMAD3-212ENST00000559937 EPS15P42566 896 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 ECE1P42892 770 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 MAGEA1P43355 309 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 HSD17B4P51659 736 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 ZNF131P52739 623 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 USP14P54578 494 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 PSMC6P62333 389 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 EPHA7Q15375 998 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 GPR162Q16538 588 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 LONRF2Q1L5Z9 754 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 CEP55Q53EZ4 464 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 KIAA1755Q5JYT7 1200 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 RINT1Q6NUQ1 792 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 B3GNT9Q6UX72 402 aa8.9□□□□□ -0.98
SMAD3-212ENST00000559937 OTOP1Q7RTM1 612 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms