RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 FBXO22Q8NEZ5 403 aa13.99□□□□□ -0.17
SPG11-219ENST00000559822 KCNB2Q92953 911 aa13.99□□□□□ -0.17
SPG11-219ENST00000559822 HLA-CQ95604 372 aa13.99□□□□□ -0.17
SPG11-219ENST00000559822 JAKMIP1Q96N16 626 aaKnown RBP13.99□□□□□ -0.17
SPG11-219ENST00000559822 SUGCTQ9HAC7 445 aa13.99□□□□□ -0.17
SPG11-219ENST00000559822 TRPC6Q9Y210 931 aa13.99□□□□□ -0.17
SPG11-219ENST00000559822 TRANK1O15050 2925 aa13.99□□□□□ -0.17
SPG11-219ENST00000559822 COL4A6Q14031 1691 aa13.98□□□□□ -0.17
SPG11-219ENST00000559822 ESYT2A0FGR8 921 aa13.98□□□□□ -0.17
SPG11-219ENST00000559822 M0QZ92 97 aa13.98□□□□□ -0.17
SPG11-219ENST00000559822 CHRNA1P02708 482 aa13.98□□□□□ -0.17
SPG11-219ENST00000559822 SCG2P13521 617 aa13.98□□□□□ -0.17
SPG11-219ENST00000559822 PSMA5P28066 241 aa13.98□□□□□ -0.17
SPG11-219ENST00000559822 CDC27P30260 824 aa13.98□□□□□ -0.17
SPG11-219ENST00000559822 HSPA4P34932 840 aa13.98□□□□□ -0.17
SPG11-219ENST00000559822 ACTR2P61160 394 aa13.98□□□□□ -0.17
SPG11-219ENST00000559822 AKAP17AQ02040 695 aaKnown RBP13.98□□□□□ -0.17
SPG11-219ENST00000559822 PTPROQ16827 1216 aa13.98□□□□□ -0.17
SPG11-219ENST00000559822 PFKFB3Q16875 520 aaPredicted RBP13.98□□□□□ -0.17
SPG11-219ENST00000559822 IER5Q5VY09 327 aa13.98□□□□□ -0.17
SPG11-219ENST00000559822 KRT40Q6A162 431 aa13.98□□□□□ -0.17
SPG11-219ENST00000559822 RUFY4Q6ZNE9 571 aa13.98□□□□□ -0.17
SPG11-219ENST00000559822 Q6ZUG5 572 aa13.98□□□□□ -0.17
SPG11-219ENST00000559822 PLPPR4Q7Z2D5 763 aa13.98□□□□□ -0.17
SPG11-219ENST00000559822 SPRED2Q7Z698 418 aa13.98□□□□□ -0.17
SPG11-219ENST00000559822 FBXL16Q8N461 479 aa13.98□□□□□ -0.17
SPG11-219ENST00000559822 PGBD1Q96JS3 809 aa13.98□□□□□ -0.17
SPG11-219ENST00000559822 AGO4Q9HCK5 861 aaKnown RBP13.98□□□□□ -0.17
SPG11-219ENST00000559822 C6orf50Q9HD87 102 aa13.98□□□□□ -0.17
SPG11-219ENST00000559822 FAM217BQ9NTX9 383 aaPredicted RBP13.98□□□□□ -0.17
SPG11-219ENST00000559822 NID2Q14112 1375 aa13.97□□□□□ -0.17
SPG11-219ENST00000559822 SPTBN5Q9NRC6 3674 aaKnown RBP13.97□□□□□ -0.17
SPG11-219ENST00000559822 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.97□□□□□ -0.17
SPG11-219ENST00000559822 MEIS1O00470 390 aa13.97□□□□□ -0.17
SPG11-219ENST00000559822 UPP2O95045 317 aa13.97□□□□□ -0.17
SPG11-219ENST00000559822 ARP10275 920 aa13.97□□□□□ -0.17
SPG11-219ENST00000559822 GHRP10912 638 aa13.97□□□□□ -0.17
SPG11-219ENST00000559822 INSRRP14616 1297 aa13.97□□□□□ -0.17
SPG11-219ENST00000559822 GNA11P29992 359 aa13.97□□□□□ -0.17
SPG11-219ENST00000559822 ADD1P35611 737 aaKnown RBP13.97□□□□□ -0.17
SPG11-219ENST00000559822 CLK2P49760 499 aaKnown RBP13.97□□□□□ -0.17
SPG11-219ENST00000559822 STAT5BP51692 787 aa13.97□□□□□ -0.17
SPG11-219ENST00000559822 IGBP1P78318 339 aa13.97□□□□□ -0.17
SPG11-219ENST00000559822 MRPS6P82932 125 aaKnown RBP13.97□□□□□ -0.17
SPG11-219ENST00000559822 TFF2Q03403 129 aa13.97□□□□□ -0.17
SPG11-219ENST00000559822 APOBRQ0VD83 1088 aa13.97□□□□□ -0.17
SPG11-219ENST00000559822 FAM160B1Q5W0V3 765 aa13.97□□□□□ -0.17
SPG11-219ENST00000559822 REXO1Q8N1G1 1221 aaKnown RBP13.97□□□□□ -0.17
SPG11-219ENST00000559822 CYP2W1Q8TAV3 490 aa13.97□□□□□ -0.17
SPG11-219ENST00000559822 DNAJB3Q8WWF6 145 aa13.97□□□□□ -0.17
SPG11-219ENST00000559822 BRF1Q92994 677 aa13.97□□□□□ -0.17
SPG11-219ENST00000559822 TCEAL9Q9UHQ7 104 aa13.97□□□□□ -0.17
SPG11-219ENST00000559822 SNX14Q9Y5W7 946 aa13.97□□□□□ -0.17
SPG11-219ENST00000559822 SQORQ9Y6N5 450 aa13.97□□□□□ -0.17
SPG11-219ENST00000559822 EPB41L2O43491 1005 aaKnown RBP13.96□□□□□ -0.17
SPG11-219ENST00000559822 BMP1P13497 986 aa13.96□□□□□ -0.17
SPG11-219ENST00000559822 RPS6KB1P23443 525 aa13.96□□□□□ -0.17
SPG11-219ENST00000559822 SETQ01105 290 aaPredicted RBP13.96□□□□□ -0.17
SPG11-219ENST00000559822 MGAT3Q09327 533 aa13.96□□□□□ -0.17
SPG11-219ENST00000559822 LPIN1Q14693 890 aa13.96□□□□□ -0.17
SPG11-219ENST00000559822 PLCB4Q15147 1175 aa13.96□□□□□ -0.17
SPG11-219ENST00000559822 FBXO47Q5MNV8 452 aa13.96□□□□□ -0.17
SPG11-219ENST00000559822 MARCH8Q5T0T0 291 aa13.96□□□□□ -0.17
SPG11-219ENST00000559822 TSHZ1Q6ZSZ6 1077 aa13.96□□□□□ -0.17
SPG11-219ENST00000559822 FAM43BQ6ZT52 329 aaPredicted RBP13.96□□□□□ -0.17
SPG11-219ENST00000559822 PLA2G4DQ86XP0 818 aa13.96□□□□□ -0.17
SPG11-219ENST00000559822 CCDC148Q8NFR7 591 aa13.96□□□□□ -0.17
SPG11-219ENST00000559822 BICD2Q8TD16 824 aa13.96□□□□□ -0.17
SPG11-219ENST00000559822 IL17RAQ96F46 866 aa13.96□□□□□ -0.17
SPG11-219ENST00000559822 PCYT2Q99447 389 aa13.96□□□□□ -0.17
SPG11-219ENST00000559822 C17orf80Q9BSJ5 609 aa13.96□□□□□ -0.17
SPG11-219ENST00000559822 ZMYND12Q9H0C1 365 aa13.96□□□□□ -0.17
SPG11-219ENST00000559822 TMEM260Q9NX78 707 aa13.96□□□□□ -0.17
SPG11-219ENST00000559822 RWDD3Q9Y3V2 267 aa13.96□□□□□ -0.17
SPG11-219ENST00000559822 CDY2AQ9Y6F7 541 aa13.96□□□□□ -0.17
SPG11-219ENST00000559822 NCOR1O75376 2440 aa13.95□□□□□ -0.18
SPG11-219ENST00000559822 POTEB3A0JP26 581 aa13.95□□□□□ -0.18
SPG11-219ENST00000559822 BACH1O14867 736 aa13.95□□□□□ -0.18
SPG11-219ENST00000559822 PRPF3O43395 683 aaKnown RBP13.95□□□□□ -0.18
SPG11-219ENST00000559822 ATG7O95352 703 aa13.95□□□□□ -0.18
SPG11-219ENST00000559822 CYP3A4P08684 503 aa13.95□□□□□ -0.18
SPG11-219ENST00000559822 CPA1P15085 419 aa13.95□□□□□ -0.18
SPG11-219ENST00000559822 KCNQ1P51787 676 aa13.95□□□□□ -0.18
SPG11-219ENST00000559822 ITGB3BPQ13352 177 aaPredicted RBP13.95□□□□□ -0.18
SPG11-219ENST00000559822 EPC2Q52LR7 807 aa13.95□□□□□ -0.18
SPG11-219ENST00000559822 TIGD5Q53EQ6 642 aa13.95□□□□□ -0.18
SPG11-219ENST00000559822 JAKMIP3Q5VZ66 844 aa13.95□□□□□ -0.18
SPG11-219ENST00000559822 POTEBQ6S5H4 581 aa13.95□□□□□ -0.18
SPG11-219ENST00000559822 NME8Q8N427 588 aa13.95□□□□□ -0.18
SPG11-219ENST00000559822 FIBCD1Q8N539 461 aa13.95□□□□□ -0.18
SPG11-219ENST00000559822 MRPL38Q96DV4 380 aaKnown RBP13.95□□□□□ -0.18
SPG11-219ENST00000559822 FTHL17Q9BXU8 183 aa13.95□□□□□ -0.18
SPG11-219ENST00000559822 RNF26Q9BY78 433 aaPredicted RBP13.95□□□□□ -0.18
SPG11-219ENST00000559822 AGXT2Q9BYV1 514 aa13.95□□□□□ -0.18
SPG11-219ENST00000559822 OSBPL7Q9BZF2 842 aa13.95□□□□□ -0.18
SPG11-219ENST00000559822 FAM49AQ9H0Q0 323 aaPredicted RBP13.95□□□□□ -0.18
SPG11-219ENST00000559822 TBC1D22BQ9NU19 505 aa13.95□□□□□ -0.18
SPG11-219ENST00000559822 PCDHA2Q9Y5H9 948 aa13.95□□□□□ -0.18
SPG11-219ENST00000559822 TRPV2Q9Y5S1 764 aa13.95□□□□□ -0.18
SPG11-219ENST00000559822 COL1A2P08123 1366 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms