RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 WDR19Q8NEZ3 1342 aa6.81□□□□□ -1.32
USP3-215ENST00000559771 PTPDC1A2A3K4 754 aa6.81□□□□□ -1.32
USP3-215ENST00000559771 EPOPA6NHQ4 379 aa6.81□□□□□ -1.32
USP3-215ENST00000559771 A6NJR5 290 aa6.81□□□□□ -1.32
USP3-215ENST00000559771 IGHDP01880 384 aa6.81□□□□□ -1.32
USP3-215ENST00000559771 GOLGA8HP0CJ92 632 aa6.81□□□□□ -1.32
USP3-215ENST00000559771 CALML3P27482 149 aa6.81□□□□□ -1.32
USP3-215ENST00000559771 TXKP42681 527 aa6.81□□□□□ -1.32
USP3-215ENST00000559771 PTGIRP43119 386 aa6.81□□□□□ -1.32
USP3-215ENST00000559771 NBPF20Q3BBV1 942 aa6.81□□□□□ -1.32
USP3-215ENST00000559771 KRTAP5-3Q6L8H2 238 aa6.81□□□□□ -1.32
USP3-215ENST00000559771 CCDC62Q6P9F0 684 aa6.81□□□□□ -1.32
USP3-215ENST00000559771 RNF207Q6ZRF8 634 aa6.81□□□□□ -1.32
USP3-215ENST00000559771 TICAM2Q86XR7 235 aa6.81□□□□□ -1.32
USP3-215ENST00000559771 PLEKHM2Q8IWE5 1019 aa6.81□□□□□ -1.32
USP3-215ENST00000559771 SMC5Q8IY18 1101 aa6.81□□□□□ -1.32
USP3-215ENST00000559771 ANKS1AQ92625 1134 aa6.81□□□□□ -1.32
USP3-215ENST00000559771 TTC14Q96N46 770 aa6.81□□□□□ -1.32
USP3-215ENST00000559771 ZKSCAN3Q9BRR0 538 aa6.81□□□□□ -1.32
USP3-215ENST00000559771 UBA5Q9GZZ9 404 aa6.81□□□□□ -1.32
USP3-215ENST00000559771 ADD3Q9UEY8 706 aaKnown RBP6.81□□□□□ -1.32
USP3-215ENST00000559771 COL4A4P53420 1690 aaPredicted RBP6.81□□□□□ -1.32
USP3-215ENST00000559771 TRIP12Q14669 1992 aaPredicted RBP6.8□□□□□ -1.32
USP3-215ENST00000559771 RFXAPO00287 272 aa6.8□□□□□ -1.32
USP3-215ENST00000559771 C2CD2LO14523 706 aa6.8□□□□□ -1.32
USP3-215ENST00000559771 OPLAHO14841 1288 aa6.8□□□□□ -1.32
USP3-215ENST00000559771 ZEB2O60315 1214 aa6.8□□□□□ -1.32
USP3-215ENST00000559771 LILRA1O75019 489 aa6.8□□□□□ -1.32
USP3-215ENST00000559771 MYL3P08590 195 aa6.8□□□□□ -1.32
USP3-215ENST00000559771 SDSP20132 328 aa6.8□□□□□ -1.32
USP3-215ENST00000559771 ARHGAP1Q07960 439 aa6.8□□□□□ -1.32
USP3-215ENST00000559771 RAB30Q15771 203 aa6.8□□□□□ -1.32
USP3-215ENST00000559771 CCDC85BQ15834 202 aaPredicted RBP6.8□□□□□ -1.32
USP3-215ENST00000559771 SLC35G1Q2M3R5 365 aa6.8□□□□□ -1.32
USP3-215ENST00000559771 TCTN1Q2MV58 587 aa6.8□□□□□ -1.32
USP3-215ENST00000559771 MFSD6Q6ZSS7 791 aa6.8□□□□□ -1.32
USP3-215ENST00000559771 SPRED2Q7Z698 418 aa6.8□□□□□ -1.32
USP3-215ENST00000559771 DGKHQ86XP1 1220 aa6.8□□□□□ -1.32
USP3-215ENST00000559771 RGS22Q8NE09 1264 aa6.8□□□□□ -1.32
USP3-215ENST00000559771 DNERQ8NFT8 737 aa6.8□□□□□ -1.32
USP3-215ENST00000559771 OR6J1Q8NGC5 347 aa6.8□□□□□ -1.32
USP3-215ENST00000559771 PPM1EQ8WY54 764 aa6.8□□□□□ -1.32
USP3-215ENST00000559771 KAT2BQ92831 832 aa6.8□□□□□ -1.32
USP3-215ENST00000559771 ASB2Q96Q27 587 aa6.8□□□□□ -1.32
USP3-215ENST00000559771 TAAR1Q96RJ0 339 aa6.8□□□□□ -1.32
USP3-215ENST00000559771 KCTD15Q96SI1 283 aaPredicted RBP6.8□□□□□ -1.32
USP3-215ENST00000559771 MTG1Q9BT17 334 aaPredicted RBP6.8□□□□□ -1.32
USP3-215ENST00000559771 LNPKQ9C0E8 428 aa6.8□□□□□ -1.32
USP3-215ENST00000559771 OSBPL3Q9H4L5 887 aa6.8□□□□□ -1.32
USP3-215ENST00000559771 TOMM22Q9NS69 142 aa6.8□□□□□ -1.32
USP3-215ENST00000559771 POLR3EQ9NVU0 708 aa6.8□□□□□ -1.32
USP3-215ENST00000559771 MSRAQ9UJ68 235 aa6.8□□□□□ -1.32
USP3-215ENST00000559771 GDF2Q9UK05 429 aaPredicted RBP6.8□□□□□ -1.32
USP3-215ENST00000559771 PCDHA11Q9Y5I1 949 aa6.8□□□□□ -1.32
USP3-215ENST00000559771 MYH6P13533 1939 aa6.8□□□□□ -1.32
USP3-215ENST00000559771 BDP1A6H8Y1 2624 aa6.8□□□□□ -1.32
USP3-215ENST00000559771 PPP1R11O60927 126 aaPredicted RBP6.79□□□□□ -1.32
USP3-215ENST00000559771 ADH1AP07327 375 aa6.79□□□□□ -1.32
USP3-215ENST00000559771 IQCF3P0C7M6 154 aa6.79□□□□□ -1.32
USP3-215ENST00000559771 SUPT20HL2P0C7V6 817 aa6.79□□□□□ -1.32
USP3-215ENST00000559771 TXNP10599 105 aaKnown RBP6.79□□□□□ -1.32
USP3-215ENST00000559771 PCP11498 1178 aaKnown RBP6.79□□□□□ -1.32
USP3-215ENST00000559771 ATP2A2P16615 1042 aaKnown RBP6.79□□□□□ -1.32
USP3-215ENST00000559771 POU3F3P20264 500 aaPredicted RBP6.79□□□□□ -1.32
USP3-215ENST00000559771 CPT1AP50416 773 aa6.79□□□□□ -1.32
USP3-215ENST00000559771 NUCB1Q02818 461 aa6.79□□□□□ -1.32
USP3-215ENST00000559771 PDE4DQ08499 809 aa6.79□□□□□ -1.32
USP3-215ENST00000559771 PPP2R5BQ15173 497 aa6.79□□□□□ -1.32
USP3-215ENST00000559771 LY6KQ17RY6 165 aa6.79□□□□□ -1.32
USP3-215ENST00000559771 USH1GQ495M9 461 aa6.79□□□□□ -1.32
USP3-215ENST00000559771 INTS6LQ5JSJ4 861 aaKnown RBP6.79□□□□□ -1.32
USP3-215ENST00000559771 KRT40Q6A162 431 aa6.79□□□□□ -1.32
USP3-215ENST00000559771 NFRKBQ6P4R8 1299 aa6.79□□□□□ -1.32
USP3-215ENST00000559771 DEFB128Q7Z7B8 93 aa6.79□□□□□ -1.32
USP3-215ENST00000559771 RPUSD2Q8IZ73 545 aaKnown RBP6.79□□□□□ -1.32
USP3-215ENST00000559771 ADGRF4Q8IZF3 695 aa6.79□□□□□ -1.32
USP3-215ENST00000559771 ENAHQ8N8S7 591 aaPredicted RBP6.79□□□□□ -1.32
USP3-215ENST00000559771 SYTL5Q8TDW5 730 aaPredicted RBP6.79□□□□□ -1.32
USP3-215ENST00000559771 SCFD2Q8WU76 684 aa6.79□□□□□ -1.32
USP3-215ENST00000559771 ATXN2LQ8WWM7 1075 aaKnown RBP6.79□□□□□ -1.32
USP3-215ENST00000559771 DHX38Q92620 1227 aaKnown RBP6.79□□□□□ -1.32
USP3-215ENST00000559771 GAS2L1Q99501 681 aaPredicted RBP6.79□□□□□ -1.32
USP3-215ENST00000559771 JMJD4Q9H9V9 463 aa6.79□□□□□ -1.32
USP3-215ENST00000559771 SLC28A3Q9HAS3 691 aa6.79□□□□□ -1.32
USP3-215ENST00000559771 TMPRSS4Q9NRS4 437 aa6.79□□□□□ -1.32
USP3-215ENST00000559771 NOP53Q9NZM5 478 aaKnown RBP6.79□□□□□ -1.32
USP3-215ENST00000559771 THEGQ9P2T0 379 aa6.79□□□□□ -1.32
USP3-215ENST00000559771 SLC4A7Q9Y6M7 1214 aa6.79□□□□□ -1.32
USP3-215ENST00000559771 TCF20Q9UGU0 1960 aaKnown RBP6.78□□□□□ -1.32
USP3-215ENST00000559771 MYH7BA7E2Y1 1941 aa6.78□□□□□ -1.32
USP3-215ENST00000559771 B4E1Z4 1266 aa6.78□□□□□ -1.32
USP3-215ENST00000559771 TULP1O00294 542 aaPredicted RBP6.78□□□□□ -1.32
USP3-215ENST00000559771 NKRFO15226 690 aaKnown RBP eCLIP6.78□□□□□ -1.32
USP3-215ENST00000559771 LPXNO60711 386 aa6.78□□□□□ -1.32
USP3-215ENST00000559771 CA3P07451 260 aa6.78□□□□□ -1.32
USP3-215ENST00000559771 PFKMP08237 780 aa6.78□□□□□ -1.32
USP3-215ENST00000559771 MMP3P08254 477 aa6.78□□□□□ -1.32
USP3-215ENST00000559771 IGFBP4P22692 258 aa6.78□□□□□ -1.32
USP3-215ENST00000559771 GHRHRQ02643 423 aa6.78□□□□□ -1.32
USP3-215ENST00000559771 TFF2Q03403 129 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms