RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 RSPH10BP0C881 870 aa14.3□□□□□ -0.12
LRRC28-214ENST00000559433 NEK4P51957 841 aa14.3□□□□□ -0.12
LRRC28-214ENST00000559433 GPNMBQ14956 572 aa14.3□□□□□ -0.12
LRRC28-214ENST00000559433 PRR16Q569H4 304 aa14.3□□□□□ -0.12
LRRC28-214ENST00000559433 CNKSR3Q6P9H4 555 aa14.3□□□□□ -0.12
LRRC28-214ENST00000559433 TRAF7Q6Q0C0 670 aa14.3□□□□□ -0.12
LRRC28-214ENST00000559433 BLIDQ8IZY5 108 aa14.3□□□□□ -0.12
LRRC28-214ENST00000559433 PHOSPHO2Q8TCD6 241 aa14.3□□□□□ -0.12
LRRC28-214ENST00000559433 PCYT2Q99447 389 aa14.3□□□□□ -0.12
LRRC28-214ENST00000559433 ZNF577Q9BSK1 485 aa14.3□□□□□ -0.12
LRRC28-214ENST00000559433 ZBED2Q9BTP6 218 aa14.3□□□□□ -0.12
LRRC28-214ENST00000559433 TRPC6Q9Y210 931 aa14.3□□□□□ -0.12
LRRC28-214ENST00000559433 STK36Q9NRP7 1315 aa14.3□□□□□ -0.12
LRRC28-214ENST00000559433 MICAL3Q7RTP6 2002 aa14.3□□□□□ -0.12
LRRC28-214ENST00000559433 CAND2O75155 1236 aa14.29□□□□□ -0.12
LRRC28-214ENST00000559433 CCNE2O96020 404 aa14.29□□□□□ -0.12
LRRC28-214ENST00000559433 CXCL10P02778 98 aa14.29□□□□□ -0.12
LRRC28-214ENST00000559433 CTSHP09668 335 aa14.29□□□□□ -0.12
LRRC28-214ENST00000559433 STAT5BP51692 787 aa14.29□□□□□ -0.12
LRRC28-214ENST00000559433 RABGGTBP53611 331 aa14.29□□□□□ -0.12
LRRC28-214ENST00000559433 ADAM17P78536 824 aa14.29□□□□□ -0.12
LRRC28-214ENST00000559433 IKBKEQ14164 716 aa14.29□□□□□ -0.12
LRRC28-214ENST00000559433 MBTPS1Q14703 1052 aa14.29□□□□□ -0.12
LRRC28-214ENST00000559433 GRIN2CQ14957 1233 aa14.29□□□□□ -0.12
LRRC28-214ENST00000559433 GRIK4Q16099 956 aa14.29□□□□□ -0.12
LRRC28-214ENST00000559433 GALNT17Q6IS24 598 aa14.29□□□□□ -0.12
LRRC28-214ENST00000559433 FAM177A1Q8N128 213 aaPredicted RBP14.29□□□□□ -0.12
LRRC28-214ENST00000559433 DAGLBQ8NCG7 672 aa14.29□□□□□ -0.12
LRRC28-214ENST00000559433 SLC9A7Q96T83 725 aa14.29□□□□□ -0.12
LRRC28-214ENST00000559433 C22orf23Q9BZE7 217 aa14.29□□□□□ -0.12
LRRC28-214ENST00000559433 NKX2-4Q9H2Z4 354 aa14.29□□□□□ -0.12
LRRC28-214ENST00000559433 TCEAL9Q9UHQ7 104 aa14.29□□□□□ -0.12
LRRC28-214ENST00000559433 PCDHA11Q9Y5I1 949 aa14.29□□□□□ -0.12
LRRC28-214ENST00000559433 BACH1O14867 736 aa14.28□□□□□ -0.12
LRRC28-214ENST00000559433 DTNBO60941 627 aa14.28□□□□□ -0.12
LRRC28-214ENST00000559433 EFCAB14O75071 495 aa14.28□□□□□ -0.12
LRRC28-214ENST00000559433 LARGE1O95461 756 aa14.28□□□□□ -0.12
LRRC28-214ENST00000559433 CTDNEP1O95476 244 aa14.28□□□□□ -0.12
LRRC28-214ENST00000559433 XBP1P17861 261 aa14.28□□□□□ -0.12
LRRC28-214ENST00000559433 CIITAP33076 1130 aa14.28□□□□□ -0.12
LRRC28-214ENST00000559433 IGBP1P78318 339 aa14.28□□□□□ -0.12
LRRC28-214ENST00000559433 ME3Q16798 604 aa14.28□□□□□ -0.12
LRRC28-214ENST00000559433 C8orf34Q49A92 452 aa14.28□□□□□ -0.12
LRRC28-214ENST00000559433 FAM160B1Q5W0V3 765 aa14.28□□□□□ -0.12
LRRC28-214ENST00000559433 PPP2R2DQ66LE6 453 aa14.28□□□□□ -0.12
LRRC28-214ENST00000559433 RUFY4Q6ZNE9 571 aa14.28□□□□□ -0.12
LRRC28-214ENST00000559433 PLPPR4Q7Z2D5 763 aa14.28□□□□□ -0.12
LRRC28-214ENST00000559433 RSPH3Q86UC2 560 aa14.28□□□□□ -0.12
LRRC28-214ENST00000559433 NECAB1Q8N987 351 aa14.28□□□□□ -0.12
LRRC28-214ENST00000559433 MAFAQ8NHW3 353 aaPredicted RBP14.28□□□□□ -0.12
LRRC28-214ENST00000559433 TBCKQ8TEA7 893 aa14.28□□□□□ -0.12
LRRC28-214ENST00000559433 GTF3C6Q969F1 213 aa14.28□□□□□ -0.12
LRRC28-214ENST00000559433 TBC1D22BQ9NU19 505 aa14.28□□□□□ -0.12
LRRC28-214ENST00000559433 TUBE1Q9UJT0 475 aa14.28□□□□□ -0.12
LRRC28-214ENST00000559433 KCNJ14Q9UNX9 436 aa14.28□□□□□ -0.12
LRRC28-214ENST00000559433 YBX2Q9Y2T7 364 aaKnown RBP14.28□□□□□ -0.12
LRRC28-214ENST00000559433 LOXHD1Q8IVV2 1947 aa14.27□□□□□ -0.12
LRRC28-214ENST00000559433 ABHD14A-ACY1A0A1B0GW23 586 aa14.27□□□□□ -0.13
LRRC28-214ENST00000559433 DHX15O43143 795 aaKnown RBP14.27□□□□□ -0.13
LRRC28-214ENST00000559433 ATG7O95352 703 aa14.27□□□□□ -0.13
LRRC28-214ENST00000559433 IGFBP4P22692 258 aa14.27□□□□□ -0.13
LRRC28-214ENST00000559433 USP11P51784 963 aa14.27□□□□□ -0.13
LRRC28-214ENST00000559433 WDR5P61964 334 aaKnown RBP14.27□□□□□ -0.13
LRRC28-214ENST00000559433 PLCB4Q15147 1175 aa14.27□□□□□ -0.13
LRRC28-214ENST00000559433 NPY5RQ15761 445 aa14.27□□□□□ -0.13
LRRC28-214ENST00000559433 TCTN1Q2MV58 587 aa14.27□□□□□ -0.13
LRRC28-214ENST00000559433 MIS18BP1Q6P0N0 1132 aa14.27□□□□□ -0.13
LRRC28-214ENST00000559433 TAF2Q6P1X5 1199 aa14.27□□□□□ -0.13
LRRC28-214ENST00000559433 ABHD15Q6UXT9 468 aa14.27□□□□□ -0.13
LRRC28-214ENST00000559433 WASF1Q92558 559 aa14.27□□□□□ -0.13
LRRC28-214ENST00000559433 LENG9Q96B70 501 aa14.27□□□□□ -0.13
LRRC28-214ENST00000559433 PHF20Q9BVI0 1012 aa14.27□□□□□ -0.13
LRRC28-214ENST00000559433 ORC3Q9UBD5 711 aaPredicted RBP14.27□□□□□ -0.13
LRRC28-214ENST00000559433 MYO9BQ13459 2157 aa14.26□□□□□ -0.13
LRRC28-214ENST00000559433 IGKV6D-21A0A0A0MT36 114 aa14.26□□□□□ -0.13
LRRC28-214ENST00000559433 POTEB3A0JP26 581 aa14.26□□□□□ -0.13
LRRC28-214ENST00000559433 MBLAC1A4D2B0 266 aaPredicted RBP14.26□□□□□ -0.13
LRRC28-214ENST00000559433 RRN3P2A6NIE6 340 aa14.26□□□□□ -0.13
LRRC28-214ENST00000559433 RBAK-RBAKDNI3L0D1 243 aa14.26□□□□□ -0.13
LRRC28-214ENST00000559433 M0R2N6 131 aa14.26□□□□□ -0.13
LRRC28-214ENST00000559433 TLL1O43897 1013 aa14.26□□□□□ -0.13
LRRC28-214ENST00000559433 INSRRP14616 1297 aa14.26□□□□□ -0.13
LRRC28-214ENST00000559433 MYOGP15173 224 aa14.26□□□□□ -0.13
LRRC28-214ENST00000559433 SLC26A2P50443 739 aa14.26□□□□□ -0.13
LRRC28-214ENST00000559433 KRT76Q01546 638 aa14.26□□□□□ -0.13
LRRC28-214ENST00000559433 NONOQ15233 471 aaKnown RBP eCLIP14.26□□□□□ -0.13
LRRC28-214ENST00000559433 MARCH8Q5T0T0 291 aa14.26□□□□□ -0.13
LRRC28-214ENST00000559433 ZNF746Q6NUN9 644 aaPredicted RBP14.26□□□□□ -0.13
LRRC28-214ENST00000559433 POTEBQ6S5H4 581 aa14.26□□□□□ -0.13
LRRC28-214ENST00000559433 KRT25Q7Z3Z0 450 aa14.26□□□□□ -0.13
LRRC28-214ENST00000559433 HERC6Q8IVU3 1022 aa14.26□□□□□ -0.13
LRRC28-214ENST00000559433 CCDC60Q8IWA6 550 aaPredicted RBP14.26□□□□□ -0.13
LRRC28-214ENST00000559433 SMAP1Q8IYB5 467 aaPredicted RBP14.26□□□□□ -0.13
LRRC28-214ENST00000559433 PRDM12Q9H4Q4 367 aa14.26□□□□□ -0.13
LRRC28-214ENST00000559433 ZNF302Q9NR11 478 aa14.26□□□□□ -0.13
LRRC28-214ENST00000559433 CHD9Q3L8U1 2897 aa14.26□□□□□ -0.13
LRRC28-214ENST00000559433 CCDC194A0A1B0GVG4 234 aa14.25□□□□□ -0.13
LRRC28-214ENST00000559433 MSH4O15457 936 aa14.25□□□□□ -0.13
LRRC28-214ENST00000559433 EDIL3O43854 480 aa14.25□□□□□ -0.13
LRRC28-214ENST00000559433 GAS7O60861 476 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms