RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 NAP1L4Q99733 375 aaKnown RBP12.29□□□□□ -0.44
TPM1-217ENST00000559108 TUT1Q9H6E5 874 aaKnown RBP12.29□□□□□ -0.44
TPM1-217ENST00000559108 STARD7Q9NQZ5 370 aa12.29□□□□□ -0.44
TPM1-217ENST00000559108 DISC1Q9NRI5 854 aa12.29□□□□□ -0.44
TPM1-217ENST00000559108 TRMT13Q9NUP7 481 aaKnown RBP12.29□□□□□ -0.44
TPM1-217ENST00000559108 TFIP11Q9UBB9 837 aaKnown RBP12.29□□□□□ -0.44
TPM1-217ENST00000559108 HDAC6Q9UBN7 1215 aa12.29□□□□□ -0.44
TPM1-217ENST00000559108 GABBR1Q9UBS5 961 aa12.29□□□□□ -0.44
TPM1-217ENST00000559108 DAXXQ9UER7 740 aaPredicted RBP12.29□□□□□ -0.44
TPM1-217ENST00000559108 LOXHD1Q8IVV2 1947 aa12.29□□□□□ -0.44
TPM1-217ENST00000559108 A0A087WWV3 80 aa12.28□□□□□ -0.44
TPM1-217ENST00000559108 WDR64B1ANS9 1081 aa12.28□□□□□ -0.44
TPM1-217ENST00000559108 ZBTB39O15060 712 aa12.28□□□□□ -0.44
TPM1-217ENST00000559108 SPATA31C1P0DKV0 1188 aa12.28□□□□□ -0.44
TPM1-217ENST00000559108 CDC25AP30304 524 aa12.28□□□□□ -0.44
TPM1-217ENST00000559108 TECP42680 631 aa12.28□□□□□ -0.44
TPM1-217ENST00000559108 RTP1P59025 263 aa12.28□□□□□ -0.44
TPM1-217ENST00000559108 CHMP4BP1P59074 171 aa12.28□□□□□ -0.44
TPM1-217ENST00000559108 GDF6Q6KF10 455 aaPredicted RBP12.28□□□□□ -0.44
TPM1-217ENST00000559108 MIER3Q7Z3K6 550 aa12.28□□□□□ -0.44
TPM1-217ENST00000559108 SH3RF1Q7Z6J0 888 aa12.28□□□□□ -0.44
TPM1-217ENST00000559108 FAM126BQ8IXS8 530 aa12.28□□□□□ -0.44
TPM1-217ENST00000559108 IGSF22Q8N9C0 903 aa12.28□□□□□ -0.44
TPM1-217ENST00000559108 AFAP1L1Q8TED9 768 aa12.28□□□□□ -0.44
TPM1-217ENST00000559108 GLT1D1Q96MS3 346 aa12.28□□□□□ -0.44
TPM1-217ENST00000559108 SH2D3AQ9BRG2 576 aa12.28□□□□□ -0.44
TPM1-217ENST00000559108 MMTAG2Q9BU76 263 aaKnown RBP12.28□□□□□ -0.44
TPM1-217ENST00000559108 TRPV6Q9H1D0 765 aa12.28□□□□□ -0.44
TPM1-217ENST00000559108 ZSCAN16Q9H4T2 348 aaPredicted RBP12.28□□□□□ -0.44
TPM1-217ENST00000559108 FBXO2Q9UK22 296 aaPredicted RBP12.28□□□□□ -0.44
TPM1-217ENST00000559108 PCDHA12Q9UN75 941 aa12.28□□□□□ -0.44
TPM1-217ENST00000559108 PCDHA10Q9Y5I2 948 aa12.28□□□□□ -0.44
TPM1-217ENST00000559108 MAFBQ9Y5Q3 323 aaPredicted RBP12.28□□□□□ -0.44
TPM1-217ENST00000559108 A0A0U1RQG5 324 aaPredicted RBP12.27□□□□□ -0.45
TPM1-217ENST00000559108 ARVCFO00192 962 aa12.27□□□□□ -0.45
TPM1-217ENST00000559108 B4GALT4O60513 344 aa12.27□□□□□ -0.45
TPM1-217ENST00000559108 MED24O75448 989 aa12.27□□□□□ -0.45
TPM1-217ENST00000559108 CD4P01730 458 aa12.27□□□□□ -0.45
TPM1-217ENST00000559108 SMIM10L2AP0DMW4 78 aa12.27□□□□□ -0.45
TPM1-217ENST00000559108 SMIM10L2BP0DMW5 78 aa12.27□□□□□ -0.45
TPM1-217ENST00000559108 ITGB8P26012 769 aa12.27□□□□□ -0.45
TPM1-217ENST00000559108 MARCKSP29966 332 aaPredicted RBP12.27□□□□□ -0.45
TPM1-217ENST00000559108 NASPP49321 788 aaPredicted RBP12.27□□□□□ -0.45
TPM1-217ENST00000559108 FXR2P51116 673 aaKnown RBP eCLIP12.27□□□□□ -0.45
TPM1-217ENST00000559108 STAT5BP51692 787 aa12.27□□□□□ -0.45
TPM1-217ENST00000559108 ADAM17P78536 824 aa12.27□□□□□ -0.45
TPM1-217ENST00000559108 CYP4A11Q02928 519 aa12.27□□□□□ -0.45
TPM1-217ENST00000559108 TLE2Q04725 743 aa12.27□□□□□ -0.45
TPM1-217ENST00000559108 CTTNQ14247 550 aaKnown RBP12.27□□□□□ -0.45
TPM1-217ENST00000559108 MARCH8Q5T0T0 291 aa12.27□□□□□ -0.45
TPM1-217ENST00000559108 C1orf53Q5VUE5 145 aa12.27□□□□□ -0.45
TPM1-217ENST00000559108 MIS18BP1Q6P0N0 1132 aa12.27□□□□□ -0.45
TPM1-217ENST00000559108 USP49Q70CQ1 688 aa12.27□□□□□ -0.45
TPM1-217ENST00000559108 SMAP1Q8IYB5 467 aaPredicted RBP12.27□□□□□ -0.45
TPM1-217ENST00000559108 SLFN12Q8IYM2 578 aa12.27□□□□□ -0.45
TPM1-217ENST00000559108 ZNF579Q8NAF0 562 aaKnown RBP12.27□□□□□ -0.45
TPM1-217ENST00000559108 DYDC2Q96IM9 177 aa12.27□□□□□ -0.45
TPM1-217ENST00000559108 CEP89Q96ST8 783 aa12.27□□□□□ -0.45
TPM1-217ENST00000559108 HSD17B14Q9BPX1 270 aa12.27□□□□□ -0.45
TPM1-217ENST00000559108 ZNF302Q9NR11 478 aa12.27□□□□□ -0.45
TPM1-217ENST00000559108 SETD4Q9NVD3 440 aa12.27□□□□□ -0.45
TPM1-217ENST00000559108 VWA3AA6NCI4 1184 aa12.26□□□□□ -0.45
TPM1-217ENST00000559108 BACH1O14867 736 aa12.26□□□□□ -0.45
TPM1-217ENST00000559108 ZEB2O60315 1214 aa12.26□□□□□ -0.45
TPM1-217ENST00000559108 KPNA6O60684 536 aa12.26□□□□□ -0.45
TPM1-217ENST00000559108 PQBP1O60828 265 aaKnown RBP12.26□□□□□ -0.45
TPM1-217ENST00000559108 SLITRK3O94933 977 aa12.26□□□□□ -0.45
TPM1-217ENST00000559108 PRPHP41219 470 aa12.26□□□□□ -0.45
TPM1-217ENST00000559108 JAK3P52333 1124 aa12.26□□□□□ -0.45
TPM1-217ENST00000559108 PRKCEQ02156 737 aa12.26□□□□□ -0.45
TPM1-217ENST00000559108 FAAP100Q0VG06 881 aa12.26□□□□□ -0.45
TPM1-217ENST00000559108 SPECC1Q5M775 1068 aa12.26□□□□□ -0.45
TPM1-217ENST00000559108 PLPPR4Q7Z2D5 763 aa12.26□□□□□ -0.45
TPM1-217ENST00000559108 TRMT1LQ7Z2T5 733 aaKnown RBP12.26□□□□□ -0.45
TPM1-217ENST00000559108 ANKRD33Q7Z3H0 272 aa12.26□□□□□ -0.45
TPM1-217ENST00000559108 SESTD1Q86VW0 696 aa12.26□□□□□ -0.45
TPM1-217ENST00000559108 LINC00301Q8NCQ3 95 aa12.26□□□□□ -0.45
TPM1-217ENST00000559108 LMBR1Q8WVP7 490 aa12.26□□□□□ -0.45
TPM1-217ENST00000559108 DHX38Q92620 1227 aaKnown RBP12.26□□□□□ -0.45
TPM1-217ENST00000559108 GLG1Q92896 1179 aa12.26□□□□□ -0.45
TPM1-217ENST00000559108 CLIC6Q96NY7 704 aa12.26□□□□□ -0.45
TPM1-217ENST00000559108 EIF2AK1Q9BQI3 630 aaKnown RBP12.26□□□□□ -0.45
TPM1-217ENST00000559108 LXNQ9BS40 222 aa12.26□□□□□ -0.45
TPM1-217ENST00000559108 OSBPL7Q9BZF2 842 aa12.26□□□□□ -0.45
TPM1-217ENST00000559108 GTF2IRD1Q9UHL9 959 aa12.26□□□□□ -0.45
TPM1-217ENST00000559108 ATP11BQ9Y2G3 1177 aa12.26□□□□□ -0.45
TPM1-217ENST00000559108 SAMM50Q9Y512 469 aa12.26□□□□□ -0.45
TPM1-217ENST00000559108 UMODL1Q5DID0 1318 aa12.26□□□□□ -0.45
TPM1-217ENST00000559108 POTEB3A0JP26 581 aa12.25□□□□□ -0.45
TPM1-217ENST00000559108 TRIM43BA6NCK2 446 aa12.25□□□□□ -0.45
TPM1-217ENST00000559108 TREHO43280 583 aa12.25□□□□□ -0.45
TPM1-217ENST00000559108 CABYRO75952 493 aa12.25□□□□□ -0.45
TPM1-217ENST00000559108 PSAPP07602 524 aa12.25□□□□□ -0.45
TPM1-217ENST00000559108 CYP2C9P11712 490 aa12.25□□□□□ -0.45
TPM1-217ENST00000559108 INSRRP14616 1297 aa12.25□□□□□ -0.45
TPM1-217ENST00000559108 SFNP31947 248 aa12.25□□□□□ -0.45
TPM1-217ENST00000559108 SLC39A14Q15043 492 aa12.25□□□□□ -0.45
TPM1-217ENST00000559108 EPHA7Q15375 998 aa12.25□□□□□ -0.45
TPM1-217ENST00000559108 BRDTQ58F21 947 aaPredicted RBP12.25□□□□□ -0.45
TPM1-217ENST00000559108 FAM47CQ5HY64 1035 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms