RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 DPF3Q92784 378 aa12.93□□□□□ -0.34
SNX1-204ENST00000559061 TEKT3Q9BXF9 490 aa12.93□□□□□ -0.34
SNX1-204ENST00000559061 FTOQ9C0B1 505 aaKnown RBP eCLIP12.93□□□□□ -0.34
SNX1-204ENST00000559061 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.93□□□□□ -0.34
SNX1-204ENST00000559061 RANBP2P49792 3224 aaKnown RBP12.93□□□□□ -0.34
SNX1-204ENST00000559061 VPS37CA5D8V6 355 aaPredicted RBP12.92□□□□□ -0.34
SNX1-204ENST00000559061 H3BQV1 296 aa12.92□□□□□ -0.34
SNX1-204ENST00000559061 KIAA0355O15063 1070 aa12.92□□□□□ -0.34
SNX1-204ENST00000559061 CHMP2AO43633 222 aa12.92□□□□□ -0.34
SNX1-204ENST00000559061 EVI5O60447 810 aa12.92□□□□□ -0.34
SNX1-204ENST00000559061 CLTBP09497 229 aa12.92□□□□□ -0.34
SNX1-204ENST00000559061 CYP2C9P11712 490 aa12.92□□□□□ -0.34
SNX1-204ENST00000559061 TRAPPC10P48553 1259 aa12.92□□□□□ -0.34
SNX1-204ENST00000559061 MCTP1Q6DN14 999 aa12.92□□□□□ -0.34
SNX1-204ENST00000559061 TRAF7Q6Q0C0 670 aa12.92□□□□□ -0.34
SNX1-204ENST00000559061 LMBR1Q8WVP7 490 aa12.92□□□□□ -0.34
SNX1-204ENST00000559061 VTI1AQ96AJ9 217 aa12.92□□□□□ -0.34
SNX1-204ENST00000559061 FAM20AQ96MK3 541 aa12.92□□□□□ -0.34
SNX1-204ENST00000559061 PRO3102Q9H379 93 aa12.92□□□□□ -0.34
SNX1-204ENST00000559061 ZDHHC9Q9Y397 364 aa12.92□□□□□ -0.34
SNX1-204ENST00000559061 KIF3AQ9Y496 699 aa12.92□□□□□ -0.34
SNX1-204ENST00000559061 MAFBQ9Y5Q3 323 aaPredicted RBP12.92□□□□□ -0.34
SNX1-204ENST00000559061 CEP290O15078 2479 aa12.91□□□□□ -0.34
SNX1-204ENST00000559061 TMEM150BA6NC51 233 aa12.91□□□□□ -0.34
SNX1-204ENST00000559061 STX6O43752 255 aa12.91□□□□□ -0.34
SNX1-204ENST00000559061 DDIT3P35638 169 aa12.91□□□□□ -0.34
SNX1-204ENST00000559061 CHMP4BP1P59074 171 aa12.91□□□□□ -0.34
SNX1-204ENST00000559061 PTPN11Q06124 597 aaPredicted RBP12.91□□□□□ -0.34
SNX1-204ENST00000559061 GPNMBQ14956 572 aa12.91□□□□□ -0.34
SNX1-204ENST00000559061 CALCRLQ16602 461 aa12.91□□□□□ -0.34
SNX1-204ENST00000559061 SWSAP1Q6NVH7 229 aa12.91□□□□□ -0.34
SNX1-204ENST00000559061 PLPPR4Q7Z2D5 763 aa12.91□□□□□ -0.34
SNX1-204ENST00000559061 SMAP1Q8IYB5 467 aaPredicted RBP12.91□□□□□ -0.34
SNX1-204ENST00000559061 TRAPPC12Q8WVT3 735 aa12.91□□□□□ -0.34
SNX1-204ENST00000559061 CEP89Q96ST8 783 aa12.91□□□□□ -0.34
SNX1-204ENST00000559061 NAP1L4Q99733 375 aaKnown RBP12.91□□□□□ -0.34
SNX1-204ENST00000559061 NOC4LQ9BVI4 516 aaKnown RBP12.91□□□□□ -0.34
SNX1-204ENST00000559061 KATNAL1Q9BW62 490 aa12.91□□□□□ -0.34
SNX1-204ENST00000559061 WNT8AQ9H1J5 351 aa12.91□□□□□ -0.34
SNX1-204ENST00000559061 DISC1Q9NRI5 854 aa12.91□□□□□ -0.34
SNX1-204ENST00000559061 SETD4Q9NVD3 440 aa12.91□□□□□ -0.34
SNX1-204ENST00000559061 PCDHA10Q9Y5I2 948 aa12.91□□□□□ -0.34
SNX1-204ENST00000559061 KAT6AQ92794 2004 aa12.91□□□□□ -0.34
SNX1-204ENST00000559061 MBLAC1A4D2B0 266 aaPredicted RBP12.9□□□□□ -0.34
SNX1-204ENST00000559061 POTEMA6NI47 508 aa12.9□□□□□ -0.34
SNX1-204ENST00000559061 WDR64B1ANS9 1081 aa12.9□□□□□ -0.34
SNX1-204ENST00000559061 TREHO43280 583 aa12.9□□□□□ -0.34
SNX1-204ENST00000559061 STAT5BP51692 787 aa12.9□□□□□ -0.34
SNX1-204ENST00000559061 EPHB4P54760 987 aa12.9□□□□□ -0.34
SNX1-204ENST00000559061 ORC2Q13416 577 aaPredicted RBP12.9□□□□□ -0.34
SNX1-204ENST00000559061 FAM47CQ5HY64 1035 aa12.9□□□□□ -0.34
SNX1-204ENST00000559061 RUFY4Q6ZNE9 571 aa12.9□□□□□ -0.34
SNX1-204ENST00000559061 TET1Q8NFU7 2136 aa12.9□□□□□ -0.34
SNX1-204ENST00000559061 OSBPL7Q9BZF2 842 aa12.9□□□□□ -0.34
SNX1-204ENST00000559061 SMARCAD1Q9H4L7 1026 aa12.9□□□□□ -0.34
SNX1-204ENST00000559061 ZNF302Q9NR11 478 aa12.9□□□□□ -0.34
SNX1-204ENST00000559061 ERAP1Q9NZ08 941 aa12.9□□□□□ -0.34
SNX1-204ENST00000559061 GABBR1Q9UBS5 961 aa12.9□□□□□ -0.34
SNX1-204ENST00000559061 MROH7Q68CQ1 1323 aa12.89□□□□□ -0.35
SNX1-204ENST00000559061 OR52Z1P0C646 297 aa12.89□□□□□ -0.35
SNX1-204ENST00000559061 INSRRP14616 1297 aa12.89□□□□□ -0.35
SNX1-204ENST00000559061 PDCP20941 246 aa12.89□□□□□ -0.35
SNX1-204ENST00000559061 TXKP42681 527 aa12.89□□□□□ -0.35
SNX1-204ENST00000559061 JAK3P52333 1124 aa12.89□□□□□ -0.35
SNX1-204ENST00000559061 ATP2C1P98194 919 aaPredicted RBP12.89□□□□□ -0.35
SNX1-204ENST00000559061 GRIN1Q05586 938 aa12.89□□□□□ -0.35
SNX1-204ENST00000559061 RBL2Q08999 1139 aa12.89□□□□□ -0.35
SNX1-204ENST00000559061 PTGDRQ13258 359 aa12.89□□□□□ -0.35
SNX1-204ENST00000559061 PTPAQ15257 358 aa12.89□□□□□ -0.35
SNX1-204ENST00000559061 GRIK4Q16099 956 aa12.89□□□□□ -0.35
SNX1-204ENST00000559061 PTGISQ16647 500 aa12.89□□□□□ -0.35
SNX1-204ENST00000559061 MIS18BP1Q6P0N0 1132 aa12.89□□□□□ -0.35
SNX1-204ENST00000559061 MIER3Q7Z3K6 550 aa12.89□□□□□ -0.35
SNX1-204ENST00000559061 SERINC5Q86VE9 423 aa12.89□□□□□ -0.35
SNX1-204ENST00000559061 BANK1Q8NDB2 785 aa12.89□□□□□ -0.35
SNX1-204ENST00000559061 RDM1Q8NG50 284 aa12.89□□□□□ -0.35
SNX1-204ENST00000559061 ATP8B4Q8TF62 1192 aa12.89□□□□□ -0.35
SNX1-204ENST00000559061 GLG1Q92896 1179 aa12.89□□□□□ -0.35
SNX1-204ENST00000559061 CHAMP1Q96JM3 812 aa12.89□□□□□ -0.35
SNX1-204ENST00000559061 SEZ6LQ9BYH1 1024 aa12.89□□□□□ -0.35
SNX1-204ENST00000559061 TTC12Q9H892 705 aaPredicted RBP12.89□□□□□ -0.35
SNX1-204ENST00000559061 PRDM5Q9NQX1 630 aaPredicted RBP12.89□□□□□ -0.35
SNX1-204ENST00000559061 RGL1Q9NZL6 768 aa12.89□□□□□ -0.35
SNX1-204ENST00000559061 ZNF215Q9UL58 517 aaPredicted RBP12.89□□□□□ -0.35
SNX1-204ENST00000559061 PTPRSQ13332 1948 aa12.89□□□□□ -0.35
SNX1-204ENST00000559061 LOXHD1Q8IVV2 1947 aa12.89□□□□□ -0.35
SNX1-204ENST00000559061 EVPLQ92817 2033 aa12.89□□□□□ -0.35
SNX1-204ENST00000559061 DCDC2CA8MYV0 355 aa12.88□□□□□ -0.35
SNX1-204ENST00000559061 PSAPP07602 524 aa12.88□□□□□ -0.35
SNX1-204ENST00000559061 SPATA31C1P0DKV0 1188 aa12.88□□□□□ -0.35
SNX1-204ENST00000559061 SFNP31947 248 aa12.88□□□□□ -0.35
SNX1-204ENST00000559061 CYP2C18P33260 490 aa12.88□□□□□ -0.35
SNX1-204ENST00000559061 MAGEA10P43363 369 aaPredicted RBP12.88□□□□□ -0.35
SNX1-204ENST00000559061 PRKCEQ02156 737 aa12.88□□□□□ -0.35
SNX1-204ENST00000559061 PPFIA1Q13136 1202 aa12.88□□□□□ -0.35
SNX1-204ENST00000559061 GNL2Q13823 731 aaKnown RBP12.88□□□□□ -0.35
SNX1-204ENST00000559061 MBTPS1Q14703 1052 aa12.88□□□□□ -0.35
SNX1-204ENST00000559061 TARBP2Q15633 366 aaKnown RBP12.88□□□□□ -0.35
SNX1-204ENST00000559061 ECM1Q16610 540 aa12.88□□□□□ -0.35
SNX1-204ENST00000559061 RILPL1Q5EBL4 403 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms