RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 SPATA33Q96N06 139 aa20.25■□□□□ 0.83
CLPX-203ENST00000558958 GPR20Q99678 358 aa20.25■□□□□ 0.83
CLPX-203ENST00000558958 LXNQ9BS40 222 aa20.25■□□□□ 0.83
CLPX-203ENST00000558958 CLSTN2Q9H4D0 955 aa20.25■□□□□ 0.83
CLPX-203ENST00000558958 FAM184BQ9ULE4 1060 aa20.25■□□□□ 0.83
CLPX-203ENST00000558958 GNEQ9Y223 722 aaKnown RBP20.25■□□□□ 0.83
CLPX-203ENST00000558958 POTEFA5A3E0 1075 aa20.24■□□□□ 0.83
CLPX-203ENST00000558958 SUPT20HL2P0C7V6 817 aa20.24■□□□□ 0.83
CLPX-203ENST00000558958 QARSP47897 775 aaKnown RBP20.24■□□□□ 0.83
CLPX-203ENST00000558958 POTEGQ6S5H5 508 aa20.24■□□□□ 0.83
CLPX-203ENST00000558958 KCNK18Q7Z418 384 aa20.24■□□□□ 0.83
CLPX-203ENST00000558958 TPH2Q8IWU9 490 aa20.24■□□□□ 0.83
CLPX-203ENST00000558958 CEP57L1Q8IYX8 460 aa20.24■□□□□ 0.83
CLPX-203ENST00000558958 BANK1Q8NDB2 785 aa20.24■□□□□ 0.83
CLPX-203ENST00000558958 SYAP1Q96A49 352 aaPredicted RBP20.24■□□□□ 0.83
CLPX-203ENST00000558958 CUEDC2Q9H467 287 aa20.24■□□□□ 0.83
CLPX-203ENST00000558958 BLOC1S4Q9NUP1 217 aa20.24■□□□□ 0.83
CLPX-203ENST00000558958 WRAP73Q9P2S5 460 aaPredicted RBP20.24■□□□□ 0.83
CLPX-203ENST00000558958 STK17AQ9UEE5 414 aa20.24■□□□□ 0.83
CLPX-203ENST00000558958 HTTP42858 3142 aa20.24■□□□□ 0.83
CLPX-203ENST00000558958 IGKV6D-21A0A0A0MT36 114 aa20.24■□□□□ 0.83
CLPX-203ENST00000558958 NOP56O00567 594 aaKnown RBP20.24■□□□□ 0.83
CLPX-203ENST00000558958 AKR1A1P14550 325 aa20.24■□□□□ 0.83
CLPX-203ENST00000558958 UGCGQ16739 394 aa20.24■□□□□ 0.83
CLPX-203ENST00000558958 CCDC183Q5T5S1 534 aa20.24■□□□□ 0.83
CLPX-203ENST00000558958 ELOA2Q8IYF1 753 aaPredicted RBP20.24■□□□□ 0.83
CLPX-203ENST00000558958 SLAIN1Q8ND83 568 aa20.24■□□□□ 0.83
CLPX-203ENST00000558958 NUP62CLQ9H1M0 184 aa20.24■□□□□ 0.83
CLPX-203ENST00000558958 ZSWIM4Q9H7M6 989 aa20.24■□□□□ 0.83
CLPX-203ENST00000558958 FOXN1O15353 648 aa20.23■□□□□ 0.83
CLPX-203ENST00000558958 LYPLA2O95372 231 aa20.23■□□□□ 0.83
CLPX-203ENST00000558958 HSPA8P11142 646 aaKnown RBP20.23■□□□□ 0.83
CLPX-203ENST00000558958 PRKAR2AP13861 404 aaKnown RBP20.23■□□□□ 0.83
CLPX-203ENST00000558958 PSMC5P62195 406 aa20.23■□□□□ 0.83
CLPX-203ENST00000558958 CAMK4Q16566 473 aa20.23■□□□□ 0.83
CLPX-203ENST00000558958 MAP3K21Q5TCX8 1036 aa20.23■□□□□ 0.83
CLPX-203ENST00000558958 SWSAP1Q6NVH7 229 aa20.23■□□□□ 0.83
CLPX-203ENST00000558958 KANK3Q6NY19 840 aa20.23■□□□□ 0.83
CLPX-203ENST00000558958 CCDC60Q8IWA6 550 aaPredicted RBP20.23■□□□□ 0.83
CLPX-203ENST00000558958 PPTC7Q8NI37 304 aa20.23■□□□□ 0.83
CLPX-203ENST00000558958 RAD54LQ92698 747 aa20.23■□□□□ 0.83
CLPX-203ENST00000558958 MAGEF1Q9HAY2 307 aa20.23■□□□□ 0.83
CLPX-203ENST00000558958 GABBR1Q9UBS5 961 aa20.23■□□□□ 0.83
CLPX-203ENST00000558958 PTCH2Q9Y6C5 1203 aa20.23■□□□□ 0.83
CLPX-203ENST00000558958 E9PMD0 336 aa20.22■□□□□ 0.83
CLPX-203ENST00000558958 SEPT4O43236 478 aa20.22■□□□□ 0.83
CLPX-203ENST00000558958 TCF7P36402 384 aaPredicted RBP20.22■□□□□ 0.83
CLPX-203ENST00000558958 PSMC6P62333 389 aa20.22■□□□□ 0.83
CLPX-203ENST00000558958 SH3RF1Q7Z6J0 888 aa20.22■□□□□ 0.83
CLPX-203ENST00000558958 C4orf19Q8IY42 314 aa20.22■□□□□ 0.83
CLPX-203ENST00000558958 OR6J1Q8NGC5 347 aa20.22■□□□□ 0.83
CLPX-203ENST00000558958 ATP6V0A1Q93050 837 aa20.22■□□□□ 0.83
CLPX-203ENST00000558958 PCYT2Q99447 389 aa20.22■□□□□ 0.83
CLPX-203ENST00000558958 KBTBD4Q9NVX7 518 aa20.22■□□□□ 0.83
CLPX-203ENST00000558958 DNM3Q9UQ16 869 aa20.22■□□□□ 0.83
CLPX-203ENST00000558958 PTPN22Q9Y2R2 807 aa20.22■□□□□ 0.83
CLPX-203ENST00000558958 Q9Y3F1 56 aa20.22■□□□□ 0.83
CLPX-203ENST00000558958 IGSF9BQ9UPX0 1349 aa20.21■□□□□ 0.83
CLPX-203ENST00000558958 BACH1O14867 736 aa20.21■□□□□ 0.83
CLPX-203ENST00000558958 GRK4P32298 578 aa20.21■□□□□ 0.83
CLPX-203ENST00000558958 MDM2Q00987 491 aaPredicted RBP20.21■□□□□ 0.83
CLPX-203ENST00000558958 TLK2Q86UE8 772 aa20.21■□□□□ 0.83
CLPX-203ENST00000558958 AFG1LQ8WV93 481 aa20.21■□□□□ 0.83
CLPX-203ENST00000558958 LARP4BQ92615 738 aaKnown RBP20.21■□□□□ 0.83
CLPX-203ENST00000558958 LENG1Q96BZ8 264 aaPredicted RBP20.21■□□□□ 0.83
CLPX-203ENST00000558958 PAGE5Q96GU1 130 aa20.21■□□□□ 0.83
CLPX-203ENST00000558958 CCDC34Q96HJ3 373 aa20.21■□□□□ 0.83
CLPX-203ENST00000558958 NACC1Q96RE7 527 aa20.21■□□□□ 0.83
CLPX-203ENST00000558958 MTRQ99707 1265 aa20.21■□□□□ 0.83
CLPX-203ENST00000558958 TNMDQ9H2S6 317 aa20.21■□□□□ 0.83
CLPX-203ENST00000558958 ZNF302Q9NR11 478 aa20.21■□□□□ 0.83
CLPX-203ENST00000558958 MAFBQ9Y5Q3 323 aaPredicted RBP20.21■□□□□ 0.83
CLPX-203ENST00000558958 A0A087WWV3 80 aa20.2■□□□□ 0.82
CLPX-203ENST00000558958 CTAGE5O15320 804 aa20.2■□□□□ 0.82
CLPX-203ENST00000558958 DYNC1LI2O43237 492 aaPredicted RBP20.2■□□□□ 0.82
CLPX-203ENST00000558958 ZNF862O60290 1169 aa20.2■□□□□ 0.82
CLPX-203ENST00000558958 DKC1O60832 514 aaKnown RBP eCLIP20.2■□□□□ 0.82
CLPX-203ENST00000558958 DUSP11O75319 330 aaKnown RBP20.2■□□□□ 0.82
CLPX-203ENST00000558958 LGR5O75473 907 aa20.2■□□□□ 0.82
CLPX-203ENST00000558958 MCM6Q14566 821 aa20.2■□□□□ 0.82
CLPX-203ENST00000558958 GRAMD1CQ8IYS0 662 aa20.2■□□□□ 0.82
CLPX-203ENST00000558958 AFAP1L1Q8TED9 768 aa20.2■□□□□ 0.82
CLPX-203ENST00000558958 PIGOQ8TEQ8 1089 aa20.2■□□□□ 0.82
CLPX-203ENST00000558958 ZBTB39O15060 712 aa20.19■□□□□ 0.82
CLPX-203ENST00000558958 EYA4O95677 639 aa20.19■□□□□ 0.82
CLPX-203ENST00000558958 INHAP05111 366 aa20.19■□□□□ 0.82
CLPX-203ENST00000558958 HSPA1AP0DMV8 641 aaKnown RBP20.19■□□□□ 0.82
CLPX-203ENST00000558958 HSPA1BP0DMV9 641 aaKnown RBP20.19■□□□□ 0.82
CLPX-203ENST00000558958 HOXD8P13378 290 aaPredicted RBP20.19■□□□□ 0.82
CLPX-203ENST00000558958 CNGA1P29973 690 aa20.19■□□□□ 0.82
CLPX-203ENST00000558958 CCND3P30281 292 aaPredicted RBP20.19■□□□□ 0.82
CLPX-203ENST00000558958 FAM160B1Q5W0V3 765 aa20.19■□□□□ 0.82
CLPX-203ENST00000558958 SV2BQ7L1I2 683 aa20.19■□□□□ 0.82
CLPX-203ENST00000558958 STAMQ92783 540 aa20.19■□□□□ 0.82
CLPX-203ENST00000558958 HOOK1Q9UJC3 728 aaKnown RBP20.19■□□□□ 0.82
CLPX-203ENST00000558958 EMSYQ7Z589 1322 aa20.19■□□□□ 0.82
CLPX-203ENST00000558958 A6NJR5 290 aa20.18■□□□□ 0.82
CLPX-203ENST00000558958 PPFIA4O75335 1185 aa20.18■□□□□ 0.82
CLPX-203ENST00000558958 STBD1O95210 358 aa20.18■□□□□ 0.82
CLPX-203ENST00000558958 PLA2G4BP0C869 781 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 358.1 ms