RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 MROH8Q9H579 483 aa8.3□□□□□ -1.08
TRAF3-206ENST00000558880 ACAD9Q9H845 621 aa8.3□□□□□ -1.08
TRAF3-206ENST00000558880 PSTPIP2Q9H939 334 aa8.3□□□□□ -1.08
TRAF3-206ENST00000558880 FLRT1Q9NZU1 646 aa8.3□□□□□ -1.08
TRAF3-206ENST00000558880 SEC63Q9UGP8 760 aaKnown RBP8.3□□□□□ -1.08
TRAF3-206ENST00000558880 SERTAD1Q9UHV2 236 aa8.3□□□□□ -1.08
TRAF3-206ENST00000558880 GABRQQ9UN88 632 aa8.3□□□□□ -1.08
TRAF3-206ENST00000558880 NOD1Q9Y239 953 aa8.3□□□□□ -1.08
TRAF3-206ENST00000558880 MRPL11Q9Y3B7 192 aaKnown RBP8.3□□□□□ -1.08
TRAF3-206ENST00000558880 ZSWIM8A7E2V4 1837 aa8.29□□□□□ -1.08
TRAF3-206ENST00000558880 COL11A1P12107 1806 aaPredicted RBP8.29□□□□□ -1.08
TRAF3-206ENST00000558880 STX6O43752 255 aa8.29□□□□□ -1.08
TRAF3-206ENST00000558880 ATP9BO43861 1147 aa8.29□□□□□ -1.08
TRAF3-206ENST00000558880 PGK2P07205 417 aa8.29□□□□□ -1.08
TRAF3-206ENST00000558880 HOXC6P09630 235 aa8.29□□□□□ -1.08
TRAF3-206ENST00000558880 GPC1P35052 558 aa8.29□□□□□ -1.08
TRAF3-206ENST00000558880 MRPS9P82933 396 aaKnown RBP8.29□□□□□ -1.08
TRAF3-206ENST00000558880 BECN1Q14457 450 aa8.29□□□□□ -1.08
TRAF3-206ENST00000558880 NPAS3Q8IXF0 933 aa8.29□□□□□ -1.08
TRAF3-206ENST00000558880 BLIDQ8IZY5 108 aa8.29□□□□□ -1.08
TRAF3-206ENST00000558880 ABRAQ8N0Z2 381 aa8.29□□□□□ -1.08
TRAF3-206ENST00000558880 MORC4Q8TE76 937 aa8.29□□□□□ -1.08
TRAF3-206ENST00000558880 IRF7Q92985 503 aa8.29□□□□□ -1.08
TRAF3-206ENST00000558880 LENG9Q96B70 501 aa8.29□□□□□ -1.08
TRAF3-206ENST00000558880 GRIP2Q9C0E4 1043 aa8.29□□□□□ -1.08
TRAF3-206ENST00000558880 CWC22Q9HCG8 908 aaKnown RBP8.29□□□□□ -1.08
TRAF3-206ENST00000558880 TFIP11Q9UBB9 837 aaKnown RBP8.29□□□□□ -1.08
TRAF3-206ENST00000558880 BIN2Q9UBW5 565 aaPredicted RBP8.29□□□□□ -1.08
TRAF3-206ENST00000558880 PCDHGA11Q9Y5H2 935 aa8.29□□□□□ -1.08
TRAF3-206ENST00000558880 GCOM1H8Y6P7 765 aaPredicted RBP8.28□□□□□ -1.08
TRAF3-206ENST00000558880 CFBP00751 764 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 POLR2MP0CAP2 368 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 ADORA2AP29274 412 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 MAPK4P31152 587 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 GMPRP36959 345 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 PHKA2P46019 1235 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 ADCY7P51828 1080 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 NLRP5P59047 1200 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 AKAP17AQ02040 695 aaKnown RBP8.28□□□□□ -1.08
TRAF3-206ENST00000558880 KIF22Q14807 665 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 TLR1Q15399 786 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 CCL14Q16627 93 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 TMEM63BQ5T3F8 832 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 JAKMIP3Q5VZ66 844 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 GALNT17Q6IS24 598 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 NSMFQ6X4W1 530 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 RNF207Q6ZRF8 634 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 PLEKHH3Q7Z736 793 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 FERMT3Q86UX7 667 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.28□□□□□ -1.08
TRAF3-206ENST00000558880 FAM184AQ8NB25 1140 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 CYP2W1Q8TAV3 490 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 WASF1Q92558 559 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 MBOAT7Q96N66 472 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 PDCD2LQ9BRP1 358 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 ANO3Q9BYT9 981 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 MAF1Q9H063 256 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 FOXP1Q9H334 677 aaPredicted RBP8.28□□□□□ -1.08
TRAF3-206ENST00000558880 MAP3K20Q9NYL2 800 aaKnown RBP8.28□□□□□ -1.08
TRAF3-206ENST00000558880 PNMA2Q9UL42 364 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 STXBP5LQ9Y2K9 1186 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 HRH3Q9Y5N1 445 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 LCTP09848 1927 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 PLXNB2O15031 1838 aa8.28□□□□□ -1.08
TRAF3-206ENST00000558880 IGLV3-22A0A075B6J6 115 aa8.27□□□□□ -1.09
TRAF3-206ENST00000558880 A0A1W2PPC1 479 aa8.27□□□□□ -1.09
TRAF3-206ENST00000558880 CDC14CA4D256 554 aa8.27□□□□□ -1.09
TRAF3-206ENST00000558880 SLC15A5A6NIM6 579 aa8.27□□□□□ -1.09
TRAF3-206ENST00000558880 FAM86B1E9PN63 330 aa8.27□□□□□ -1.09
TRAF3-206ENST00000558880 STRNO43815 780 aa8.27□□□□□ -1.09
TRAF3-206ENST00000558880 FARP2O94887 1054 aaPredicted RBP8.27□□□□□ -1.09
TRAF3-206ENST00000558880 SNAI1O95863 264 aaPredicted RBP8.27□□□□□ -1.09
TRAF3-206ENST00000558880 FAM86B2P0C5J1 330 aa8.27□□□□□ -1.09
TRAF3-206ENST00000558880 ZSCAN22P10073 491 aaPredicted RBP8.27□□□□□ -1.09
TRAF3-206ENST00000558880 ITGB5P18084 799 aa8.27□□□□□ -1.09
TRAF3-206ENST00000558880 CALML3P27482 149 aa8.27□□□□□ -1.09
TRAF3-206ENST00000558880 CIITAP33076 1130 aa8.27□□□□□ -1.09
TRAF3-206ENST00000558880 SREBF1P36956 1147 aa8.27□□□□□ -1.09
TRAF3-206ENST00000558880 PSMC4P43686 418 aa8.27□□□□□ -1.09
TRAF3-206ENST00000558880 ALDH5A1P51649 535 aaPredicted RBP8.27□□□□□ -1.09
TRAF3-206ENST00000558880 UBXN2AP68543 259 aa8.27□□□□□ -1.09
TRAF3-206ENST00000558880 PRKCZQ05513 592 aa8.27□□□□□ -1.09
TRAF3-206ENST00000558880 TMEM214Q6NUQ4 689 aaKnown RBP8.27□□□□□ -1.09
TRAF3-206ENST00000558880 MAMDC4Q6UXC1 1216 aa8.27□□□□□ -1.09
TRAF3-206ENST00000558880 VSIG10LQ86VR7 867 aa8.27□□□□□ -1.09
TRAF3-206ENST00000558880 TEX2Q8IWB9 1127 aa8.27□□□□□ -1.09
TRAF3-206ENST00000558880 SAMD3Q8N6K7 520 aa8.27□□□□□ -1.09
TRAF3-206ENST00000558880 C4orf32Q8N8J7 132 aa8.27□□□□□ -1.09
TRAF3-206ENST00000558880 CCDC148Q8NFR7 591 aa8.27□□□□□ -1.09
TRAF3-206ENST00000558880 CUL5Q93034 780 aa8.27□□□□□ -1.09
TRAF3-206ENST00000558880 MAML3Q96JK9 1138 aa8.27□□□□□ -1.09
TRAF3-206ENST00000558880 MMP19Q99542 508 aa8.27□□□□□ -1.09
TRAF3-206ENST00000558880 FTOQ9C0B1 505 aaKnown RBP eCLIP8.27□□□□□ -1.09
TRAF3-206ENST00000558880 C6orf50Q9HD87 102 aa8.27□□□□□ -1.09
TRAF3-206ENST00000558880 PRDM6Q9NQX0 595 aa8.27□□□□□ -1.09
TRAF3-206ENST00000558880 PXMP2Q9NR77 195 aa8.27□□□□□ -1.09
TRAF3-206ENST00000558880 FBXO40Q9UH90 709 aa8.27□□□□□ -1.09
TRAF3-206ENST00000558880 TELO2Q9Y4R8 837 aa8.27□□□□□ -1.09
TRAF3-206ENST00000558880 UNC80Q8N2C7 3258 aa8.26□□□□□ -1.09
TRAF3-206ENST00000558880 CYP3A7-CYP3A51PA0A087WV96 503 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms