RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 MYO7AQ13402 2215 aa18.37■□□□□ 0.53
CDC42BPB-203ENST00000558867 M0QZ92 97 aa18.37■□□□□ 0.53
CDC42BPB-203ENST00000558867 STAG3L1P0CL83 205 aa18.37■□□□□ 0.53
CDC42BPB-203ENST00000558867 TCF7P36402 384 aaPredicted RBP18.37■□□□□ 0.53
CDC42BPB-203ENST00000558867 CYB5R4Q7L1T6 521 aa18.37■□□□□ 0.53
CDC42BPB-203ENST00000558867 SEPT1Q8WYJ6 367 aa18.37■□□□□ 0.53
CDC42BPB-203ENST00000558867 GLG1Q92896 1179 aa18.37■□□□□ 0.53
CDC42BPB-203ENST00000558867 ESYT1Q9BSJ8 1104 aa18.37■□□□□ 0.53
CDC42BPB-203ENST00000558867 OSBPL7Q9BZF2 842 aa18.37■□□□□ 0.53
CDC42BPB-203ENST00000558867 RNF216Q9NWF9 866 aaPredicted RBP18.37■□□□□ 0.53
CDC42BPB-203ENST00000558867 SEC63Q9UGP8 760 aaKnown RBP18.37■□□□□ 0.53
CDC42BPB-203ENST00000558867 SQORQ9Y6N5 450 aa18.37■□□□□ 0.53
CDC42BPB-203ENST00000558867 RRN3P2A6NIE6 340 aa18.36■□□□□ 0.53
CDC42BPB-203ENST00000558867 DGKIO75912 1065 aa18.36■□□□□ 0.53
CDC42BPB-203ENST00000558867 KIF5BP33176 963 aa18.36■□□□□ 0.53
CDC42BPB-203ENST00000558867 ADAM15Q13444 863 aa18.36■□□□□ 0.53
CDC42BPB-203ENST00000558867 LPIN1Q14693 890 aa18.36■□□□□ 0.53
CDC42BPB-203ENST00000558867 GRIK4Q16099 956 aa18.36■□□□□ 0.53
CDC42BPB-203ENST00000558867 FAM43BQ6ZT52 329 aaPredicted RBP18.36■□□□□ 0.53
CDC42BPB-203ENST00000558867 CMTR2Q8IYT2 770 aaKnown RBP18.36■□□□□ 0.53
CDC42BPB-203ENST00000558867 ZNF689Q96CS4 500 aaPredicted RBP18.36■□□□□ 0.53
CDC42BPB-203ENST00000558867 GPRASP2Q96D09 838 aa18.36■□□□□ 0.53
CDC42BPB-203ENST00000558867 RRP36Q96EU6 259 aaKnown RBP18.36■□□□□ 0.53
CDC42BPB-203ENST00000558867 SMARCAD1Q9H4L7 1026 aa18.36■□□□□ 0.53
CDC42BPB-203ENST00000558867 ALG13Q9NP73 1137 aaKnown RBP18.36■□□□□ 0.53
CDC42BPB-203ENST00000558867 PLAGL2Q9UPG8 496 aa18.36■□□□□ 0.53
CDC42BPB-203ENST00000558867 FSD2A1L4K1 749 aa18.35■□□□□ 0.53
CDC42BPB-203ENST00000558867 PIK3CDO00329 1044 aa18.35■□□□□ 0.53
CDC42BPB-203ENST00000558867 CYTH3O43739 400 aa18.35■□□□□ 0.53
CDC42BPB-203ENST00000558867 PTPN5P54829 565 aa18.35■□□□□ 0.53
CDC42BPB-203ENST00000558867 DLX2Q07687 328 aaPredicted RBP18.35■□□□□ 0.53
CDC42BPB-203ENST00000558867 MGAT3Q09327 533 aa18.35■□□□□ 0.53
CDC42BPB-203ENST00000558867 SEMA3FQ13275 785 aa18.35■□□□□ 0.53
CDC42BPB-203ENST00000558867 BECN1Q14457 450 aa18.35■□□□□ 0.53
CDC42BPB-203ENST00000558867 FBXO47Q5MNV8 452 aa18.35■□□□□ 0.53
CDC42BPB-203ENST00000558867 BMP8AQ7Z5Y6 402 aa18.35■□□□□ 0.53
CDC42BPB-203ENST00000558867 NPAS4Q8IUM7 802 aa18.35■□□□□ 0.53
CDC42BPB-203ENST00000558867 SUGP1Q8IWZ8 645 aaKnown RBP18.35■□□□□ 0.53
CDC42BPB-203ENST00000558867 NCOA7Q8NI08 942 aa18.35■□□□□ 0.53
CDC42BPB-203ENST00000558867 CTCFLQ8NI51 663 aaPredicted RBP18.35■□□□□ 0.53
CDC42BPB-203ENST00000558867 DNAJB3Q8WWF6 145 aa18.35■□□□□ 0.53
CDC42BPB-203ENST00000558867 RUFY2Q8WXA3 655 aa18.35■□□□□ 0.53
CDC42BPB-203ENST00000558867 RC3H2Q9HBD1 1191 aaKnown RBP18.35■□□□□ 0.53
CDC42BPB-203ENST00000558867 CDY2AQ9Y6F7 541 aa18.35■□□□□ 0.53
CDC42BPB-203ENST00000558867 BAZ2BQ9UIF8 2168 aaKnown RBP18.34■□□□□ 0.53
CDC42BPB-203ENST00000558867 MAFGO15525 162 aa18.34■□□□□ 0.53
CDC42BPB-203ENST00000558867 CSPG5O95196 566 aa18.34■□□□□ 0.53
CDC42BPB-203ENST00000558867 EYA4O95677 639 aa18.34■□□□□ 0.53
CDC42BPB-203ENST00000558867 LINC00271P0C7V0 271 aa18.34■□□□□ 0.53
CDC42BPB-203ENST00000558867 MRPS6P82932 125 aaKnown RBP18.34■□□□□ 0.53
CDC42BPB-203ENST00000558867 TROAPQ12815 778 aa18.34■□□□□ 0.53
CDC42BPB-203ENST00000558867 RUFY4Q6ZNE9 571 aa18.34■□□□□ 0.53
CDC42BPB-203ENST00000558867 EFHBQ8N7U6 833 aa18.34■□□□□ 0.53
CDC42BPB-203ENST00000558867 PIBF1Q8WXW3 757 aa18.34■□□□□ 0.53
CDC42BPB-203ENST00000558867 PBXIP1Q96AQ6 731 aa18.34■□□□□ 0.53
CDC42BPB-203ENST00000558867 LZTS2Q9BRK4 669 aa18.34■□□□□ 0.53
CDC42BPB-203ENST00000558867 LRFN2Q9ULH4 789 aa18.34■□□□□ 0.53
CDC42BPB-203ENST00000558867 MBLAC1A4D2B0 266 aaPredicted RBP18.33■□□□□ 0.52
CDC42BPB-203ENST00000558867 TBX10O75333 385 aa18.33■□□□□ 0.52
CDC42BPB-203ENST00000558867 MARK3P27448 753 aa18.33■□□□□ 0.52
CDC42BPB-203ENST00000558867 SMARCA1P28370 1054 aa18.33■□□□□ 0.52
CDC42BPB-203ENST00000558867 GNAQP50148 359 aa18.33■□□□□ 0.52
CDC42BPB-203ENST00000558867 USP17L6PQ6QN14 398 aa18.33■□□□□ 0.52
CDC42BPB-203ENST00000558867 TRIM67Q6ZTA4 783 aa18.33■□□□□ 0.52
CDC42BPB-203ENST00000558867 MAP3K14Q99558 947 aa18.33■□□□□ 0.52
CDC42BPB-203ENST00000558867 SPZ1Q9BXG8 430 aa18.33■□□□□ 0.52
CDC42BPB-203ENST00000558867 AZI2Q9H6S1 392 aa18.33■□□□□ 0.52
CDC42BPB-203ENST00000558867 AAASQ9NRG9 546 aa18.33■□□□□ 0.52
CDC42BPB-203ENST00000558867 TTC3P53804 2025 aa18.32■□□□□ 0.52
CDC42BPB-203ENST00000558867 TMEM221A6NGB7 291 aa18.32■□□□□ 0.52
CDC42BPB-203ENST00000558867 M0R296 226 aa18.32■□□□□ 0.52
CDC42BPB-203ENST00000558867 CD52P31358 61 aa18.32■□□□□ 0.52
CDC42BPB-203ENST00000558867 IGBP1P78318 339 aa18.32■□□□□ 0.52
CDC42BPB-203ENST00000558867 MTMR1Q13613 665 aa18.32■□□□□ 0.52
CDC42BPB-203ENST00000558867 SLC35G1Q2M3R5 365 aa18.32■□□□□ 0.52
CDC42BPB-203ENST00000558867 SPPL3Q8TCT6 385 aa18.32■□□□□ 0.52
CDC42BPB-203ENST00000558867 MSLNLQ96KJ4 702 aa18.32■□□□□ 0.52
CDC42BPB-203ENST00000558867 IRF2BPLQ9H1B7 796 aa18.32■□□□□ 0.52
CDC42BPB-203ENST00000558867 WDFY4Q6ZS81 3184 aa18.32■□□□□ 0.52
CDC42BPB-203ENST00000558867 TRIOO75962 3097 aa18.32■□□□□ 0.52
CDC42BPB-203ENST00000558867 SPDYE3A6NKU9 549 aa18.31■□□□□ 0.52
CDC42BPB-203ENST00000558867 RBAK-RBAKDNI3L0D1 243 aa18.31■□□□□ 0.52
CDC42BPB-203ENST00000558867 LINC01565O15544 149 aa18.31■□□□□ 0.52
CDC42BPB-203ENST00000558867 SGSM2O43147 1006 aa18.31■□□□□ 0.52
CDC42BPB-203ENST00000558867 KCNA2P16389 499 aa18.31■□□□□ 0.52
CDC42BPB-203ENST00000558867 GTF2F1P35269 517 aaKnown RBP eCLIP18.31■□□□□ 0.52
CDC42BPB-203ENST00000558867 COASYQ13057 564 aa18.31■□□□□ 0.52
CDC42BPB-203ENST00000558867 PAK2Q13177 524 aa18.31■□□□□ 0.52
CDC42BPB-203ENST00000558867 ODR4Q5SWX8 454 aa18.31■□□□□ 0.52
CDC42BPB-203ENST00000558867 KLHL23Q8NBE8 558 aa18.31■□□□□ 0.52
CDC42BPB-203ENST00000558867 MICAL1Q8TDZ2 1067 aa18.31■□□□□ 0.52
CDC42BPB-203ENST00000558867 POF1BQ8WVV4 589 aa18.31■□□□□ 0.52
CDC42BPB-203ENST00000558867 SNX21Q969T3 373 aa18.31■□□□□ 0.52
CDC42BPB-203ENST00000558867 KIF2CQ99661 725 aa18.31■□□□□ 0.52
CDC42BPB-203ENST00000558867 FAM49AQ9H0Q0 323 aaPredicted RBP18.31■□□□□ 0.52
CDC42BPB-203ENST00000558867 PSTPIP2Q9H939 334 aa18.31■□□□□ 0.52
CDC42BPB-203ENST00000558867 PCDHB12Q9Y5F1 795 aa18.31■□□□□ 0.52
CDC42BPB-203ENST00000558867 TRPV2Q9Y5S1 764 aa18.31■□□□□ 0.52
CDC42BPB-203ENST00000558867 MRPL42Q9Y6G3 142 aaKnown RBP18.31■□□□□ 0.52
CDC42BPB-203ENST00000558867 ZNF318Q5VUA4 2279 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms