RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 DCAF4Q8WV16 495 aa15.3■□□□□ 0.04
TMED3-205ENST00000558562 CLEC4DQ8WXI8 215 aa15.3■□□□□ 0.04
TMED3-205ENST00000558562 GPKOWQ92917 476 aaPredicted RBP eCLIP15.3■□□□□ 0.04
TMED3-205ENST00000558562 TGS1Q96RS0 853 aaKnown RBP15.3■□□□□ 0.04
TMED3-205ENST00000558562 CPVLQ9H3G5 476 aa15.3■□□□□ 0.04
TMED3-205ENST00000558562 GPCPD1Q9NPB8 672 aa15.3■□□□□ 0.04
TMED3-205ENST00000558562 SEC63Q9UGP8 760 aaKnown RBP15.3■□□□□ 0.04
TMED3-205ENST00000558562 LINC01553A4QN01 128 aa15.29■□□□□ 0.04
TMED3-205ENST00000558562 GOLGA6L3A6NEY3 463 aa15.29■□□□□ 0.04
TMED3-205ENST00000558562 NKRFO15226 690 aaKnown RBP eCLIP15.29■□□□□ 0.04
TMED3-205ENST00000558562 SPTLC2O15270 562 aa15.29■□□□□ 0.04
TMED3-205ENST00000558562 NBNO60934 754 aa15.29■□□□□ 0.04
TMED3-205ENST00000558562 GJB5O95377 273 aa15.29■□□□□ 0.04
TMED3-205ENST00000558562 SELPP16109 830 aa15.29■□□□□ 0.04
TMED3-205ENST00000558562 LIG1P18858 919 aa15.29■□□□□ 0.04
TMED3-205ENST00000558562 MRE11P49959 708 aa15.29■□□□□ 0.04
TMED3-205ENST00000558562 ERVK-21P61565 698 aa15.29■□□□□ 0.04
TMED3-205ENST00000558562 LEXMQ3ZCV2 418 aa15.29■□□□□ 0.04
TMED3-205ENST00000558562 RILPL1Q5EBL4 403 aa15.29■□□□□ 0.04
TMED3-205ENST00000558562 GPATCH4Q5T3I0 446 aaKnown RBP15.29■□□□□ 0.04
TMED3-205ENST00000558562 WWC2Q6AWC2 1192 aa15.29■□□□□ 0.04
TMED3-205ENST00000558562 PTCRAQ6ISU1 281 aaPredicted RBP15.29■□□□□ 0.04
TMED3-205ENST00000558562 RNF207Q6ZRF8 634 aa15.29■□□□□ 0.04
TMED3-205ENST00000558562 LRRC8DQ7L1W4 858 aa15.29■□□□□ 0.04
TMED3-205ENST00000558562 HEATR3Q7Z4Q2 680 aa15.29■□□□□ 0.04
TMED3-205ENST00000558562 HOMER1Q86YM7 354 aa15.29■□□□□ 0.04
TMED3-205ENST00000558562 FAM177A1Q8N128 213 aaPredicted RBP15.29■□□□□ 0.04
TMED3-205ENST00000558562 CCDC155Q8N6L0 562 aa15.29■□□□□ 0.04
TMED3-205ENST00000558562 CAGE1Q8TC20 777 aa15.29■□□□□ 0.04
TMED3-205ENST00000558562 AFAP1L1Q8TED9 768 aa15.29■□□□□ 0.04
TMED3-205ENST00000558562 AFG1LQ8WV93 481 aa15.29■□□□□ 0.04
TMED3-205ENST00000558562 DHX38Q92620 1227 aaKnown RBP15.29■□□□□ 0.04
TMED3-205ENST00000558562 RAD9AQ99638 391 aa15.29■□□□□ 0.04
TMED3-205ENST00000558562 RIOX1Q9H6W3 641 aa15.29■□□□□ 0.04
TMED3-205ENST00000558562 LOC102724159A0A0B4J2E5 919 aa15.28■□□□□ 0.04
TMED3-205ENST00000558562 STXBP3O00186 592 aa15.28■□□□□ 0.04
TMED3-205ENST00000558562 EDNRBP24530 442 aa15.28■□□□□ 0.04
TMED3-205ENST00000558562 RPS6P62753 249 aaKnown RBP15.28■□□□□ 0.04
TMED3-205ENST00000558562 SLC39A14Q15043 492 aa15.28■□□□□ 0.04
TMED3-205ENST00000558562 PWP2Q15269 919 aaKnown RBP15.28■□□□□ 0.04
TMED3-205ENST00000558562 NPY5RQ15761 445 aa15.28■□□□□ 0.04
TMED3-205ENST00000558562 CNKSR3Q6P9H4 555 aa15.28■□□□□ 0.04
TMED3-205ENST00000558562 CCDC12Q8WUD4 166 aaPredicted RBP15.28■□□□□ 0.04
TMED3-205ENST00000558562 PIGSQ96S52 555 aa15.28■□□□□ 0.04
TMED3-205ENST00000558562 UBA5Q9GZZ9 404 aa15.28■□□□□ 0.04
TMED3-205ENST00000558562 VAT1LQ9HCJ6 419 aa15.28■□□□□ 0.04
TMED3-205ENST00000558562 DDX19AQ9NUU7 478 aaKnown RBP15.28■□□□□ 0.04
TMED3-205ENST00000558562 BARHL2Q9NY43 387 aa15.28■□□□□ 0.04
TMED3-205ENST00000558562 NOL7Q9UMY1 257 aaKnown RBP15.28■□□□□ 0.04
TMED3-205ENST00000558562 SIP14410 1827 aa15.27■□□□□ 0.04
TMED3-205ENST00000558562 SYCE3A1L190 88 aa15.27■□□□□ 0.04
TMED3-205ENST00000558562 FSD2A1L4K1 749 aa15.27■□□□□ 0.04
TMED3-205ENST00000558562 H3BQ06 376 aaPredicted RBP15.27■□□□□ 0.04
TMED3-205ENST00000558562 hCG_1984214I3L0E3 225 aa15.27■□□□□ 0.04
TMED3-205ENST00000558562 LETM1O95202 739 aaPredicted RBP15.27■□□□□ 0.04
TMED3-205ENST00000558562 CKBP12277 381 aa15.27■□□□□ 0.04
TMED3-205ENST00000558562 NAPAP54920 295 aa15.27■□□□□ 0.04
TMED3-205ENST00000558562 LY6KQ17RY6 165 aa15.27■□□□□ 0.04
TMED3-205ENST00000558562 GALNT17Q6IS24 598 aa15.27■□□□□ 0.04
TMED3-205ENST00000558562 BTNL9Q6UXG8 535 aa15.27■□□□□ 0.04
TMED3-205ENST00000558562 CCDC73Q6ZRK6 1079 aa15.27■□□□□ 0.04
TMED3-205ENST00000558562 ZNF713Q8N859 430 aaPredicted RBP15.27■□□□□ 0.04
TMED3-205ENST00000558562 DAGLBQ8NCG7 672 aa15.27■□□□□ 0.04
TMED3-205ENST00000558562 KAT2BQ92831 832 aa15.27■□□□□ 0.04
TMED3-205ENST00000558562 TNFRSF25Q93038 417 aa15.27■□□□□ 0.04
TMED3-205ENST00000558562 C17orf80Q9BSJ5 609 aa15.27■□□□□ 0.04
TMED3-205ENST00000558562 PCDHA7Q9UN72 937 aa15.27■□□□□ 0.04
TMED3-205ENST00000558562 PCDHA4Q9UN74 947 aa15.27■□□□□ 0.04
TMED3-205ENST00000558562 ABHD14A-ACY1A0A1B0GW23 586 aa15.26■□□□□ 0.03
TMED3-205ENST00000558562 A0A1W2PQ27 194 aa15.26■□□□□ 0.03
TMED3-205ENST00000558562 A0A1W2PQ64 194 aa15.26■□□□□ 0.03
TMED3-205ENST00000558562 A0A1W2PQD8 194 aa15.26■□□□□ 0.03
TMED3-205ENST00000558562 GRXCR2A6NFK2 248 aa15.26■□□□□ 0.03
TMED3-205ENST00000558562 PPP6R2O75170 966 aa15.26■□□□□ 0.03
TMED3-205ENST00000558562 CXCL10P02778 98 aa15.26■□□□□ 0.03
TMED3-205ENST00000558562 MMP3P08254 477 aa15.26■□□□□ 0.03
TMED3-205ENST00000558562 ALADP13716 330 aa15.26■□□□□ 0.03
TMED3-205ENST00000558562 TOB1P50616 345 aaPredicted RBP15.26■□□□□ 0.03
TMED3-205ENST00000558562 PTPAQ15257 358 aa15.26■□□□□ 0.03
TMED3-205ENST00000558562 L1TD1Q5T7N2 865 aaKnown RBP15.26■□□□□ 0.03
TMED3-205ENST00000558562 TYW1BQ6NUM6 668 aa15.26■□□□□ 0.03
TMED3-205ENST00000558562 LRSAM1Q6UWE0 723 aa15.26■□□□□ 0.03
TMED3-205ENST00000558562 SEPT14Q6ZU15 432 aa15.26■□□□□ 0.03
TMED3-205ENST00000558562 BLIDQ8IZY5 108 aa15.26■□□□□ 0.03
TMED3-205ENST00000558562 FSIP1Q8NA03 581 aa15.26■□□□□ 0.03
TMED3-205ENST00000558562 MRPS27Q92552 414 aaKnown RBP15.26■□□□□ 0.03
TMED3-205ENST00000558562 MPHOSPH6Q99547 160 aaKnown RBP15.26■□□□□ 0.03
TMED3-205ENST00000558562 NUP62CLQ9H1M0 184 aa15.26■□□□□ 0.03
TMED3-205ENST00000558562 CEP131Q9UPN4 1083 aa15.26■□□□□ 0.03
TMED3-205ENST00000558562 FAM205CA6NFA0 338 aa15.25■□□□□ 0.03
TMED3-205ENST00000558562 NHLH1Q02575 133 aa15.25■□□□□ 0.03
TMED3-205ENST00000558562 IKBKEQ14164 716 aa15.25■□□□□ 0.03
TMED3-205ENST00000558562 ADALQ6DHV7 355 aa15.25■□□□□ 0.03
TMED3-205ENST00000558562 CCDC62Q6P9F0 684 aa15.25■□□□□ 0.03
TMED3-205ENST00000558562 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.25■□□□□ 0.03
TMED3-205ENST00000558562 EP400NLQ6ZTU2 488 aa15.25■□□□□ 0.03
TMED3-205ENST00000558562 SESTD1Q86VW0 696 aa15.25■□□□□ 0.03
TMED3-205ENST00000558562 GAS2L3Q86XJ1 694 aa15.25■□□□□ 0.03
TMED3-205ENST00000558562 ADGRF4Q8IZF3 695 aa15.25■□□□□ 0.03
TMED3-205ENST00000558562 FBXO22Q8NEZ5 403 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms