RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 ZNF689Q96CS4 500 aaPredicted RBP6.02□□□□□ -1.45
SPG11-208ENST00000558155 RIPOR3Q96MK2 946 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 AMNQ9BXJ7 453 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 OSBPL7Q9BZF2 842 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 CPVLQ9H3G5 476 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 TLE6Q9H808 572 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 KAT14Q9H8E8 782 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 EHMT1Q9H9B1 1298 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 TLR9Q9NR96 1032 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 CLEC1BQ9P126 229 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 ZNF215Q9UL58 517 aaPredicted RBP6.02□□□□□ -1.45
SPG11-208ENST00000558155 USP15Q9Y4E8 981 aaPredicted RBP6.02□□□□□ -1.45
SPG11-208ENST00000558155 TTC3P53804 2025 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 TRANK1O15050 2925 aa6.02□□□□□ -1.45
SPG11-208ENST00000558155 NRCAMQ92823 1304 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 COL4A6Q14031 1691 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 GCOM1H8Y6P7 765 aaPredicted RBP6.01□□□□□ -1.45
SPG11-208ENST00000558155 FOXP2O15409 715 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 KDM4AO75164 1064 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 STAM2O75886 525 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 RGS20O76081 388 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 CHRNA1P02708 482 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 RPLP2P05387 115 aaKnown RBP6.01□□□□□ -1.45
SPG11-208ENST00000558155 ITGB1P05556 798 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 LINC00271P0C7V0 271 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 POLR2MP0CAP2 368 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 SRGAP2BP0DMP2 458 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 GHRP10912 638 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 UBA1P22314 1058 aaKnown RBP6.01□□□□□ -1.45
SPG11-208ENST00000558155 ID4P47928 161 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 NRIP1P48552 1158 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 HAND2P61296 217 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 ARHGAP4P98171 946 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 UBE3AQ05086 875 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 CAMK1Q14012 370 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 PGM5Q15124 567 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 PTPN21Q16825 1174 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 GNPTABQ3T906 1256 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 PDE12Q6L8Q7 609 aaKnown RBP6.01□□□□□ -1.45
SPG11-208ENST00000558155 TAF2Q6P1X5 1199 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 METTL7BQ6UX53 244 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 FAM43BQ6ZT52 329 aaPredicted RBP6.01□□□□□ -1.45
SPG11-208ENST00000558155 TICAM2Q86XR7 235 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 KLHL23Q8NBE8 558 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 PNMA1Q8ND90 353 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 PI4K2BQ8TCG2 481 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 EVI5LQ96CN4 794 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 ASIC4Q96FT7 647 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 NEK1Q96PY6 1258 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 CDCA3Q99618 268 aaPredicted RBP6.01□□□□□ -1.45
SPG11-208ENST00000558155 ZKSCAN3Q9BRR0 538 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 FTHL17Q9BXU8 183 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 JMJD4Q9H9V9 463 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 AAASQ9NRG9 546 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 LRFN2Q9ULH4 789 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 PCDHB12Q9Y5F1 795 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 PCDHA1Q9Y5I3 950 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 SQORQ9Y6N5 450 aa6.01□□□□□ -1.45
SPG11-208ENST00000558155 CCDC171Q6TFL3 1326 aa6□□□□□ -1.45
SPG11-208ENST00000558155 ZDBF2Q9HCK1 2354 aa6□□□□□ -1.45
SPG11-208ENST00000558155 PRR23AA6NEV1 266 aa6□□□□□ -1.45
SPG11-208ENST00000558155 TRIM6-TRIM34B2RNG4 842 aa6□□□□□ -1.45
SPG11-208ENST00000558155 SPATA31C2B4DYI2 1134 aa6□□□□□ -1.45
SPG11-208ENST00000558155 RBAK-RBAKDNI3L0D1 243 aa6□□□□□ -1.45
SPG11-208ENST00000558155 ZNF213O14771 459 aa6□□□□□ -1.45
SPG11-208ENST00000558155 PPFIA3O75145 1194 aa6□□□□□ -1.45
SPG11-208ENST00000558155 MX1P20591 662 aa6□□□□□ -1.45
SPG11-208ENST00000558155 DNAJB1P25685 340 aa6□□□□□ -1.45
SPG11-208ENST00000558155 NBL1P41271 181 aa6□□□□□ -1.45
SPG11-208ENST00000558155 MFAP1P55081 439 aaKnown RBP6□□□□□ -1.45
SPG11-208ENST00000558155 ADAM17P78536 824 aa6□□□□□ -1.45
SPG11-208ENST00000558155 GHRHRQ02643 423 aa6□□□□□ -1.45
SPG11-208ENST00000558155 LPIN1Q14693 890 aa6□□□□□ -1.45
SPG11-208ENST00000558155 SPOUT1Q5T280 376 aaKnown RBP6□□□□□ -1.45
SPG11-208ENST00000558155 UTP14CQ5TAP6 766 aaKnown RBP6□□□□□ -1.45
SPG11-208ENST00000558155 IER5Q5VY09 327 aa6□□□□□ -1.45
SPG11-208ENST00000558155 TSHZ1Q6ZSZ6 1077 aa6□□□□□ -1.45
SPG11-208ENST00000558155 CYFIP1Q7L576 1253 aa6□□□□□ -1.45
SPG11-208ENST00000558155 ASCL5Q7RTU5 278 aa6□□□□□ -1.45
SPG11-208ENST00000558155 ADGRD2Q7Z7M1 963 aa6□□□□□ -1.45
SPG11-208ENST00000558155 FCHSD1Q86WN1 690 aa6□□□□□ -1.45
SPG11-208ENST00000558155 NPAS4Q8IUM7 802 aa6□□□□□ -1.45
SPG11-208ENST00000558155 UBALD2Q8IYN6 164 aa6□□□□□ -1.45
SPG11-208ENST00000558155 ATP8B4Q8TF62 1192 aa6□□□□□ -1.45
SPG11-208ENST00000558155 LMBR1Q8WVP7 490 aa6□□□□□ -1.45
SPG11-208ENST00000558155 SUSD6Q92537 303 aa6□□□□□ -1.45
SPG11-208ENST00000558155 TNPO1Q92973 898 aaKnown RBP6□□□□□ -1.45
SPG11-208ENST00000558155 NKD2Q969F2 451 aaPredicted RBP6□□□□□ -1.45
SPG11-208ENST00000558155 ZSCAN10Q96SZ4 725 aaPredicted RBP6□□□□□ -1.45
SPG11-208ENST00000558155 GPR20Q99678 358 aa6□□□□□ -1.45
SPG11-208ENST00000558155 RC3H2Q9HBD1 1191 aaKnown RBP6□□□□□ -1.45
SPG11-208ENST00000558155 BARX2Q9UMQ3 279 aaPredicted RBP6□□□□□ -1.45
SPG11-208ENST00000558155 NR2E1Q9Y466 385 aa6□□□□□ -1.45
SPG11-208ENST00000558155 MRPL42Q9Y6G3 142 aaKnown RBP6□□□□□ -1.45
SPG11-208ENST00000558155 XIRP2A4UGR9 3374 aa6□□□□□ -1.45
SPG11-208ENST00000558155 KMT2EQ8IZD2 1858 aa6□□□□□ -1.45
SPG11-208ENST00000558155 ZMYM6O95789 1325 aa5.99□□□□□ -1.45
SPG11-208ENST00000558155 ATG2AQ2TAZ0 1938 aa5.99□□□□□ -1.45
SPG11-208ENST00000558155 REV3LO60673 3130 aa5.99□□□□□ -1.45
SPG11-208ENST00000558155 RRN3P2A6NIE6 340 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms