RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 IL17RAQ96F46 866 aa10.02□□□□□ -0.81
SNRPA1-206ENST00000558059 CDX2Q99626 313 aaPredicted RBP10.02□□□□□ -0.81
SNRPA1-206ENST00000558059 AGO4Q9HCK5 861 aaKnown RBP10.02□□□□□ -0.81
SNRPA1-206ENST00000558059 C6orf50Q9HD87 102 aa10.02□□□□□ -0.81
SNRPA1-206ENST00000558059 SETD4Q9NVD3 440 aa10.02□□□□□ -0.81
SNRPA1-206ENST00000558059 SLC4A7Q9Y6M7 1214 aa10.02□□□□□ -0.81
SNRPA1-206ENST00000558059 EVPLQ92817 2033 aa10.02□□□□□ -0.81
SNRPA1-206ENST00000558059 NFASCO94856 1347 aa10.02□□□□□ -0.81
SNRPA1-206ENST00000558059 UNC80Q8N2C7 3258 aa10.01□□□□□ -0.81
SNRPA1-206ENST00000558059 MICAL3Q7RTP6 2002 aa10.01□□□□□ -0.81
SNRPA1-206ENST00000558059 IGLV3-22A0A075B6J6 115 aa10.01□□□□□ -0.81
SNRPA1-206ENST00000558059 ZBBXA8MT70 800 aa10.01□□□□□ -0.81
SNRPA1-206ENST00000558059 FAM86B1E9PN63 330 aa10.01□□□□□ -0.81
SNRPA1-206ENST00000558059 EDIL3O43854 480 aa10.01□□□□□ -0.81
SNRPA1-206ENST00000558059 LGR5O75473 907 aa10.01□□□□□ -0.81
SNRPA1-206ENST00000558059 PARNO95453 639 aaKnown RBP10.01□□□□□ -0.81
SNRPA1-206ENST00000558059 FAM86B2P0C5J1 330 aa10.01□□□□□ -0.81
SNRPA1-206ENST00000558059 ACTN1P12814 892 aa10.01□□□□□ -0.81
SNRPA1-206ENST00000558059 GNA11P29992 359 aa10.01□□□□□ -0.81
SNRPA1-206ENST00000558059 SSRP1Q08945 709 aaKnown RBP10.01□□□□□ -0.81
SNRPA1-206ENST00000558059 STK3Q13188 491 aa10.01□□□□□ -0.81
SNRPA1-206ENST00000558059 GRIN2CQ14957 1233 aa10.01□□□□□ -0.81
SNRPA1-206ENST00000558059 TCTN1Q2MV58 587 aa10.01□□□□□ -0.81
SNRPA1-206ENST00000558059 MCTP2Q6DN12 878 aa10.01□□□□□ -0.81
SNRPA1-206ENST00000558059 REXO1Q8N1G1 1221 aaKnown RBP10.01□□□□□ -0.81
SNRPA1-206ENST00000558059 RASGRP4Q8TDF6 673 aa10.01□□□□□ -0.81
SNRPA1-206ENST00000558059 PCYT2Q99447 389 aa10.01□□□□□ -0.81
SNRPA1-206ENST00000558059 FTOQ9C0B1 505 aaKnown RBP eCLIP10.01□□□□□ -0.81
SNRPA1-206ENST00000558059 ZNF576Q9H609 170 aa10.01□□□□□ -0.81
SNRPA1-206ENST00000558059 JPH1Q9HDC5 661 aaPredicted RBP10.01□□□□□ -0.81
SNRPA1-206ENST00000558059 SH3GLB2Q9NR46 395 aa10.01□□□□□ -0.81
SNRPA1-206ENST00000558059 VPS54Q9P1Q0 977 aa10.01□□□□□ -0.81
SNRPA1-206ENST00000558059 SLC9A2Q9UBY0 812 aa10.01□□□□□ -0.81
SNRPA1-206ENST00000558059 ZNF215Q9UL58 517 aaPredicted RBP10.01□□□□□ -0.81
SNRPA1-206ENST00000558059 YBX2Q9Y2T7 364 aaKnown RBP10.01□□□□□ -0.81
SNRPA1-206ENST00000558059 LOXHD1Q8IVV2 1947 aa10□□□□□ -0.81
SNRPA1-206ENST00000558059 DHX15O43143 795 aaKnown RBP10□□□□□ -0.81
SNRPA1-206ENST00000558059 ATG7O95352 703 aa10□□□□□ -0.81
SNRPA1-206ENST00000558059 GNAT1P11488 350 aa10□□□□□ -0.81
SNRPA1-206ENST00000558059 ATP2A2P16615 1042 aaKnown RBP10□□□□□ -0.81
SNRPA1-206ENST00000558059 MARK3P27448 753 aa10□□□□□ -0.81
SNRPA1-206ENST00000558059 CIITAP33076 1130 aa10□□□□□ -0.81
SNRPA1-206ENST00000558059 ZNF76P36508 570 aa10□□□□□ -0.81
SNRPA1-206ENST00000558059 THPOP40225 353 aa10□□□□□ -0.81
SNRPA1-206ENST00000558059 RABGGTBP53611 331 aa10□□□□□ -0.81
SNRPA1-206ENST00000558059 ACTR2P61160 394 aa10□□□□□ -0.81
SNRPA1-206ENST00000558059 SCRN1Q12765 414 aa10□□□□□ -0.81
SNRPA1-206ENST00000558059 RAB30Q15771 203 aa10□□□□□ -0.81
SNRPA1-206ENST00000558059 PLA2G4DQ86XP0 818 aa10□□□□□ -0.81
SNRPA1-206ENST00000558059 TRIM22Q8IYM9 498 aa10□□□□□ -0.81
SNRPA1-206ENST00000558059 CCDC148Q8NFR7 591 aa10□□□□□ -0.81
SNRPA1-206ENST00000558059 BICD2Q8TD16 824 aa10□□□□□ -0.81
SNRPA1-206ENST00000558059 LMBR1Q8WVP7 490 aa10□□□□□ -0.81
SNRPA1-206ENST00000558059 MYLIPQ8WY64 445 aa10□□□□□ -0.81
SNRPA1-206ENST00000558059 AIFM3Q96NN9 605 aa10□□□□□ -0.81
SNRPA1-206ENST00000558059 SDF4Q9BRK5 362 aa10□□□□□ -0.81
SNRPA1-206ENST00000558059 SMARCAD1Q9H4L7 1026 aa10□□□□□ -0.81
SNRPA1-206ENST00000558059 ERAP1Q9NZ08 941 aa10□□□□□ -0.81
SNRPA1-206ENST00000558059 MSRAQ9UJ68 235 aa10□□□□□ -0.81
SNRPA1-206ENST00000558059 TPCN1Q9ULQ1 816 aa10□□□□□ -0.81
SNRPA1-206ENST00000558059 NRCAMQ92823 1304 aa10□□□□□ -0.81
SNRPA1-206ENST00000558059 CUL9Q8IWT3 2517 aa9.99□□□□□ -0.81
SNRPA1-206ENST00000558059 REV3LO60673 3130 aa9.99□□□□□ -0.81
SNRPA1-206ENST00000558059 RSPH10B2B2RC85 870 aa9.99□□□□□ -0.81
SNRPA1-206ENST00000558059 CPLX1O14810 134 aa9.99□□□□□ -0.81
SNRPA1-206ENST00000558059 PFKFB2O60825 505 aa9.99□□□□□ -0.81
SNRPA1-206ENST00000558059 BAIAP3O94812 1187 aa9.99□□□□□ -0.81
SNRPA1-206ENST00000558059 DEXIO95424 95 aa9.99□□□□□ -0.81
SNRPA1-206ENST00000558059 CCNE2O96020 404 aa9.99□□□□□ -0.81
SNRPA1-206ENST00000558059 RSPH10BP0C881 870 aa9.99□□□□□ -0.81
SNRPA1-206ENST00000558059 MYOGP15173 224 aa9.99□□□□□ -0.81
SNRPA1-206ENST00000558059 NLRP5P59047 1200 aa9.99□□□□□ -0.81
SNRPA1-206ENST00000558059 NPY5RQ15761 445 aa9.99□□□□□ -0.81
SNRPA1-206ENST00000558059 CNKSR3Q6P9H4 555 aa9.99□□□□□ -0.81
SNRPA1-206ENST00000558059 PHOSPHO2Q8TCD6 241 aa9.99□□□□□ -0.81
SNRPA1-206ENST00000558059 GLG1Q92896 1179 aa9.99□□□□□ -0.81
SNRPA1-206ENST00000558059 UIMC1Q96RL1 719 aa9.99□□□□□ -0.81
SNRPA1-206ENST00000558059 OSBPL7Q9BZF2 842 aa9.99□□□□□ -0.81
SNRPA1-206ENST00000558059 NKX2-4Q9H2Z4 354 aa9.99□□□□□ -0.81
SNRPA1-206ENST00000558059 BOLA1Q9Y3E2 137 aa9.99□□□□□ -0.81
SNRPA1-206ENST00000558059 PCDHA11Q9Y5I1 949 aa9.99□□□□□ -0.81
SNRPA1-206ENST00000558059 EMSYQ7Z589 1322 aa9.99□□□□□ -0.81
SNRPA1-206ENST00000558059 PRRC2BQ5JSZ5 2229 aaKnown RBP9.99□□□□□ -0.81
SNRPA1-206ENST00000558059 IGKV6D-21A0A0A0MT36 114 aa9.98□□□□□ -0.81
SNRPA1-206ENST00000558059 MBLAC1A4D2B0 266 aaPredicted RBP9.98□□□□□ -0.81
SNRPA1-206ENST00000558059 M0R2N6 131 aa9.98□□□□□ -0.81
SNRPA1-206ENST00000558059 IPO5O00410 1097 aaKnown RBP9.98□□□□□ -0.81
SNRPA1-206ENST00000558059 DTNBO60941 627 aa9.98□□□□□ -0.81
SNRPA1-206ENST00000558059 CAND2O75155 1236 aa9.98□□□□□ -0.81
SNRPA1-206ENST00000558059 CTDNEP1O95476 244 aa9.98□□□□□ -0.81
SNRPA1-206ENST00000558059 INSRRP14616 1297 aa9.98□□□□□ -0.81
SNRPA1-206ENST00000558059 AK2P54819 239 aa9.98□□□□□ -0.81
SNRPA1-206ENST00000558059 WDR5P61964 334 aaKnown RBP9.98□□□□□ -0.81
SNRPA1-206ENST00000558059 PPFIA1Q13136 1202 aa9.98□□□□□ -0.81
SNRPA1-206ENST00000558059 GRIK4Q16099 956 aa9.98□□□□□ -0.81
SNRPA1-206ENST00000558059 FAM26DQ5JW98 314 aa9.98□□□□□ -0.81
SNRPA1-206ENST00000558059 MARCH8Q5T0T0 291 aa9.98□□□□□ -0.81
SNRPA1-206ENST00000558059 CPLX2Q6PUV4 134 aaKnown RBP9.98□□□□□ -0.81
SNRPA1-206ENST00000558059 ABHD15Q6UXT9 468 aa9.98□□□□□ -0.81
SNRPA1-206ENST00000558059 RUFY4Q6ZNE9 571 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms