RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 RUFY3Q7L099 469 aa13.05□□□□□ -0.32
LINC00648-204ENST00000557749 TRIM22Q8IYM9 498 aa13.05□□□□□ -0.32
LINC00648-204ENST00000557749 CMTR1Q8N1G2 835 aaKnown RBP13.05□□□□□ -0.32
LINC00648-204ENST00000557749 IL27Q8NEV9 243 aa13.05□□□□□ -0.32
LINC00648-204ENST00000557749 IL31RAQ8NI17 732 aa13.05□□□□□ -0.32
LINC00648-204ENST00000557749 BRF1Q92994 677 aa13.05□□□□□ -0.32
LINC00648-204ENST00000557749 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.05□□□□□ -0.32
LINC00648-204ENST00000557749 BRPF3Q9ULD4 1205 aa13.05□□□□□ -0.32
LINC00648-204ENST00000557749 STXBP5LQ9Y2K9 1186 aa13.05□□□□□ -0.32
LINC00648-204ENST00000557749 V9GY48 417 aaPredicted RBP13.05□□□□□ -0.32
LINC00648-204ENST00000557749 HAS3O00219 553 aa13.04□□□□□ -0.32
LINC00648-204ENST00000557749 EFCAB14O75071 495 aa13.04□□□□□ -0.32
LINC00648-204ENST00000557749 CAND2O75155 1236 aa13.04□□□□□ -0.32
LINC00648-204ENST00000557749 BAIAP3O94812 1187 aa13.04□□□□□ -0.32
LINC00648-204ENST00000557749 SCG2P13521 617 aa13.04□□□□□ -0.32
LINC00648-204ENST00000557749 PTGS1P23219 599 aa13.04□□□□□ -0.32
LINC00648-204ENST00000557749 CHMP4BP1P59074 171 aa13.04□□□□□ -0.32
LINC00648-204ENST00000557749 MRPS9P82933 396 aaKnown RBP13.04□□□□□ -0.32
LINC00648-204ENST00000557749 PTK7Q13308 1070 aa13.04□□□□□ -0.32
LINC00648-204ENST00000557749 PFKFB3Q16875 520 aaPredicted RBP13.04□□□□□ -0.32
LINC00648-204ENST00000557749 RASIP1Q5U651 963 aa13.04□□□□□ -0.32
LINC00648-204ENST00000557749 WWC2Q6AWC2 1192 aa13.04□□□□□ -0.32
LINC00648-204ENST00000557749 ZNF365Q70YC5 407 aa13.04□□□□□ -0.32
LINC00648-204ENST00000557749 RAB11FIP4Q86YS3 637 aa13.04□□□□□ -0.32
LINC00648-204ENST00000557749 TCEANC2Q96MN5 208 aa13.04□□□□□ -0.32
LINC00648-204ENST00000557749 RNF26Q9BY78 433 aaPredicted RBP13.04□□□□□ -0.32
LINC00648-204ENST00000557749 IL21Q9HBE4 155 aa13.04□□□□□ -0.32
LINC00648-204ENST00000557749 C6orf50Q9HD87 102 aa13.04□□□□□ -0.32
LINC00648-204ENST00000557749 MTMR10Q9NXD2 777 aa13.04□□□□□ -0.32
LINC00648-204ENST00000557749 MSRAQ9UJ68 235 aa13.04□□□□□ -0.32
LINC00648-204ENST00000557749 PCDHA6Q9UN73 950 aa13.04□□□□□ -0.32
LINC00648-204ENST00000557749 PCDHA8Q9Y5H6 950 aa13.04□□□□□ -0.32
LINC00648-204ENST00000557749 EMSYQ7Z589 1322 aa13.04□□□□□ -0.32
LINC00648-204ENST00000557749 SMCO2A6NFE2 343 aa13.03□□□□□ -0.32
LINC00648-204ENST00000557749 H3BRB1 525 aa13.03□□□□□ -0.32
LINC00648-204ENST00000557749 CPLX1O14810 134 aa13.03□□□□□ -0.32
LINC00648-204ENST00000557749 PRPF3O43395 683 aaKnown RBP13.03□□□□□ -0.32
LINC00648-204ENST00000557749 CDKL5O76039 1030 aa13.03□□□□□ -0.32
LINC00648-204ENST00000557749 CYP2C9P11712 490 aa13.03□□□□□ -0.32
LINC00648-204ENST00000557749 SELPP16109 830 aa13.03□□□□□ -0.32
LINC00648-204ENST00000557749 EPHB4P54760 987 aa13.03□□□□□ -0.32
LINC00648-204ENST00000557749 CCL23P55773 120 aa13.03□□□□□ -0.32
LINC00648-204ENST00000557749 EVCP57679 992 aa13.03□□□□□ -0.32
LINC00648-204ENST00000557749 ANAPC15P60006 121 aa13.03□□□□□ -0.32
LINC00648-204ENST00000557749 HSDL1Q3SXM5 330 aa13.03□□□□□ -0.32
LINC00648-204ENST00000557749 KAT2BQ92831 832 aa13.03□□□□□ -0.32
LINC00648-204ENST00000557749 GPKOWQ92917 476 aaPredicted RBP eCLIP13.03□□□□□ -0.32
LINC00648-204ENST00000557749 SDF4Q9BRK5 362 aa13.03□□□□□ -0.32
LINC00648-204ENST00000557749 C22orf23Q9BZE7 217 aa13.03□□□□□ -0.32
LINC00648-204ENST00000557749 WNT8AQ9H1J5 351 aa13.03□□□□□ -0.32
LINC00648-204ENST00000557749 TUT1Q9H6E5 874 aaKnown RBP13.03□□□□□ -0.32
LINC00648-204ENST00000557749 JADE2Q9NQC1 790 aa13.03□□□□□ -0.32
LINC00648-204ENST00000557749 RTEL1Q9NZ71 1219 aa13.03□□□□□ -0.32
LINC00648-204ENST00000557749 TCEAL9Q9UHQ7 104 aa13.03□□□□□ -0.32
LINC00648-204ENST00000557749 SLC4A7Q9Y6M7 1214 aa13.03□□□□□ -0.32
LINC00648-204ENST00000557749 MYH7BA7E2Y1 1941 aa13.02□□□□□ -0.32
LINC00648-204ENST00000557749 C17orf102A2RUQ5 167 aa13.02□□□□□ -0.33
LINC00648-204ENST00000557749 STXBP3O00186 592 aa13.02□□□□□ -0.33
LINC00648-204ENST00000557749 LGALS2P05162 132 aa13.02□□□□□ -0.33
LINC00648-204ENST00000557749 IQCF3P0C7M6 154 aa13.02□□□□□ -0.33
LINC00648-204ENST00000557749 ZNF286BP0CG31 522 aa13.02□□□□□ -0.33
LINC00648-204ENST00000557749 APOBRQ0VD83 1088 aa13.02□□□□□ -0.33
LINC00648-204ENST00000557749 ANKRD1Q15327 319 aa13.02□□□□□ -0.33
LINC00648-204ENST00000557749 CYFIP1Q7L576 1253 aa13.02□□□□□ -0.33
LINC00648-204ENST00000557749 NIPA1Q7RTP0 329 aa13.02□□□□□ -0.33
LINC00648-204ENST00000557749 PHOSPHO2Q8TCD6 241 aa13.02□□□□□ -0.33
LINC00648-204ENST00000557749 ZNF274Q96GC6 653 aaPredicted RBP13.02□□□□□ -0.33
LINC00648-204ENST00000557749 SLC9A7Q96T83 725 aa13.02□□□□□ -0.33
LINC00648-204ENST00000557749 GPR20Q99678 358 aa13.02□□□□□ -0.33
LINC00648-204ENST00000557749 ALG1Q9BT22 464 aa13.02□□□□□ -0.33
LINC00648-204ENST00000557749 SH3GLB2Q9NR46 395 aa13.02□□□□□ -0.33
LINC00648-204ENST00000557749 LIMD1Q9UGP4 676 aa13.02□□□□□ -0.33
LINC00648-204ENST00000557749 UBIAD1Q9Y5Z9 338 aa13.02□□□□□ -0.33
LINC00648-204ENST00000557749 hCG_1642624A0A1W2PR95 340 aa13.01□□□□□ -0.33
LINC00648-204ENST00000557749 SPTLC1O15269 473 aa13.01□□□□□ -0.33
LINC00648-204ENST00000557749 TLL1O43897 1013 aa13.01□□□□□ -0.33
LINC00648-204ENST00000557749 IFNAR1P17181 557 aa13.01□□□□□ -0.33
LINC00648-204ENST00000557749 ZNF76P36508 570 aa13.01□□□□□ -0.33
LINC00648-204ENST00000557749 SREBF1P36956 1147 aa13.01□□□□□ -0.33
LINC00648-204ENST00000557749 SETQ01105 290 aaPredicted RBP13.01□□□□□ -0.33
LINC00648-204ENST00000557749 SP2Q02086 613 aa13.01□□□□□ -0.33
LINC00648-204ENST00000557749 UBE2SQ16763 222 aa13.01□□□□□ -0.33
LINC00648-204ENST00000557749 CEP55Q53EZ4 464 aa13.01□□□□□ -0.33
LINC00648-204ENST00000557749 GDF6Q6KF10 455 aaPredicted RBP13.01□□□□□ -0.33
LINC00648-204ENST00000557749 RNF19BQ6ZMZ0 732 aa13.01□□□□□ -0.33
LINC00648-204ENST00000557749 FAM43BQ6ZT52 329 aaPredicted RBP13.01□□□□□ -0.33
LINC00648-204ENST00000557749 LRRC8DQ7L1W4 858 aa13.01□□□□□ -0.33
LINC00648-204ENST00000557749 REXO1Q8N1G1 1221 aaKnown RBP13.01□□□□□ -0.33
LINC00648-204ENST00000557749 SEPT1Q8WYJ6 367 aa13.01□□□□□ -0.33
LINC00648-204ENST00000557749 TIFAQ96CG3 184 aa13.01□□□□□ -0.33
LINC00648-204ENST00000557749 C16orf70Q9BSU1 422 aa13.01□□□□□ -0.33
LINC00648-204ENST00000557749 ANO3Q9BYT9 981 aa13.01□□□□□ -0.33
LINC00648-204ENST00000557749 FTOQ9C0B1 505 aaKnown RBP eCLIP13.01□□□□□ -0.33
LINC00648-204ENST00000557749 ZMYND12Q9H0C1 365 aa13.01□□□□□ -0.33
LINC00648-204ENST00000557749 AZI2Q9H6S1 392 aa13.01□□□□□ -0.33
LINC00648-204ENST00000557749 JPH1Q9HDC5 661 aaPredicted RBP13.01□□□□□ -0.33
LINC00648-204ENST00000557749 ERAP1Q9NZ08 941 aa13.01□□□□□ -0.33
LINC00648-204ENST00000557749 PLA2G2EQ9NZK7 142 aa13.01□□□□□ -0.33
LINC00648-204ENST00000557749 HDAC6Q9UBN7 1215 aa13.01□□□□□ -0.33
LINC00648-204ENST00000557749 NRCAMQ92823 1304 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms