RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-208ENST00000557702 SUMF1Q8NBK3 374 aa11.01□□□□□ -0.65
PABPN1-208ENST00000557702 OSBP2Q969R2 916 aa11.01□□□□□ -0.65
PABPN1-208ENST00000557702 USP26Q9BXU7 913 aa11.01□□□□□ -0.65
PABPN1-208ENST00000557702 FTHL17Q9BXU8 183 aa11.01□□□□□ -0.65
PABPN1-208ENST00000557702 NACAP1Q9BZK3 213 aa11.01□□□□□ -0.65
PABPN1-208ENST00000557702 CYP26B1Q9NR63 512 aa11.01□□□□□ -0.65
PABPN1-208ENST00000557702 COL20A1Q9P218 1284 aa11.01□□□□□ -0.65
PABPN1-208ENST00000557702 NCDNQ9UBB6 729 aa11.01□□□□□ -0.65
PABPN1-208ENST00000557702 PUF60Q9UHX1 559 aaKnown RBP11.01□□□□□ -0.65
PABPN1-208ENST00000557702 DBR1Q9UK59 544 aaKnown RBP11.01□□□□□ -0.65
PABPN1-208ENST00000557702 USTQ9Y2C2 406 aa11.01□□□□□ -0.65
PABPN1-208ENST00000557702 KIAA1217Q5T5P2 1943 aa11.01□□□□□ -0.65
PABPN1-208ENST00000557702 LGALS2P05162 132 aa11□□□□□ -0.65
PABPN1-208ENST00000557702 LMNB2Q03252 620 aa11□□□□□ -0.65
PABPN1-208ENST00000557702 PPARAQ07869 468 aa11□□□□□ -0.65
PABPN1-208ENST00000557702 TBC1D8BQ0IIM8 1120 aa11□□□□□ -0.65
PABPN1-208ENST00000557702 TDGQ13569 410 aa11□□□□□ -0.65
PABPN1-208ENST00000557702 COL9A3Q14050 684 aaPredicted RBP11□□□□□ -0.65
PABPN1-208ENST00000557702 ATAT1Q5SQI0 421 aa11□□□□□ -0.65
PABPN1-208ENST00000557702 TAF2Q6P1X5 1199 aa11□□□□□ -0.65
PABPN1-208ENST00000557702 RUFY4Q6ZNE9 571 aa11□□□□□ -0.65
PABPN1-208ENST00000557702 TSHZ1Q6ZSZ6 1077 aa11□□□□□ -0.65
PABPN1-208ENST00000557702 RSPH3Q86UC2 560 aa11□□□□□ -0.65
PABPN1-208ENST00000557702 MCF2L2Q86YR7 1114 aa11□□□□□ -0.65
PABPN1-208ENST00000557702 APPBP2Q92624 585 aa11□□□□□ -0.65
PABPN1-208ENST00000557702 SECISBP2LQ93073 1101 aaKnown RBP11□□□□□ -0.65
PABPN1-208ENST00000557702 BORCS6Q96GS4 357 aa11□□□□□ -0.65
PABPN1-208ENST00000557702 TCF25Q9BQ70 676 aa11□□□□□ -0.65
PABPN1-208ENST00000557702 NGRNQ9NPE2 291 aaKnown RBP11□□□□□ -0.65
PABPN1-208ENST00000557702 LRFN2Q9ULH4 789 aa11□□□□□ -0.65
PABPN1-208ENST00000557702 DUSP12Q9UNI6 340 aa11□□□□□ -0.65
PABPN1-208ENST00000557702 ZNF316A6NFI3 1004 aaPredicted RBP10.99□□□□□ -0.65
PABPN1-208ENST00000557702 NOP56O00567 594 aaKnown RBP10.99□□□□□ -0.65
PABPN1-208ENST00000557702 EOMESO95936 686 aa10.99□□□□□ -0.65
PABPN1-208ENST00000557702 TGFB3P10600 412 aa10.99□□□□□ -0.65
PABPN1-208ENST00000557702 NOVP48745 357 aa10.99□□□□□ -0.65
PABPN1-208ENST00000557702 GATMP50440 423 aa10.99□□□□□ -0.65
PABPN1-208ENST00000557702 ADAM17P78536 824 aa10.99□□□□□ -0.65
PABPN1-208ENST00000557702 MGAT3Q09327 533 aa10.99□□□□□ -0.65
PABPN1-208ENST00000557702 FBXO47Q5MNV8 452 aa10.99□□□□□ -0.65
PABPN1-208ENST00000557702 ZKSCAN2Q63HK3 967 aa10.99□□□□□ -0.65
PABPN1-208ENST00000557702 RTN4RL1Q86UN2 441 aaPredicted RBP10.99□□□□□ -0.65
PABPN1-208ENST00000557702 C1orf210Q8IVY1 113 aa10.99□□□□□ -0.65
PABPN1-208ENST00000557702 LINC01599Q8WXQ3 324 aa10.99□□□□□ -0.65
PABPN1-208ENST00000557702 ENTPD7Q9NQZ7 604 aa10.99□□□□□ -0.65
PABPN1-208ENST00000557702 PXMP2Q9NR77 195 aa10.99□□□□□ -0.65
PABPN1-208ENST00000557702 LZTS1Q9Y250 596 aa10.99□□□□□ -0.65
PABPN1-208ENST00000557702 CCDC171Q6TFL3 1326 aa10.99□□□□□ -0.65
PABPN1-208ENST00000557702 NRCAMQ92823 1304 aa10.99□□□□□ -0.65
PABPN1-208ENST00000557702 PLXNA4Q9HCM2 1894 aa10.99□□□□□ -0.65
PABPN1-208ENST00000557702 ANKRD11Q6UB99 2663 aaPredicted RBP10.99□□□□□ -0.65
PABPN1-208ENST00000557702 MYH7P12883 1935 aa10.98□□□□□ -0.65
PABPN1-208ENST00000557702 RANBP6O60518 1105 aaKnown RBP10.98□□□□□ -0.65
PABPN1-208ENST00000557702 WEE2P0C1S8 567 aa10.98□□□□□ -0.65
PABPN1-208ENST00000557702 HSPD1P10809 573 aaKnown RBP10.98□□□□□ -0.65
PABPN1-208ENST00000557702 PDHBP11177 359 aa10.98□□□□□ -0.65
PABPN1-208ENST00000557702 TOP1P11387 765 aaKnown RBP10.98□□□□□ -0.65
PABPN1-208ENST00000557702 SCG2P13521 617 aa10.98□□□□□ -0.65
PABPN1-208ENST00000557702 HOXB3P14651 431 aaPredicted RBP10.98□□□□□ -0.65
PABPN1-208ENST00000557702 UBA1P22314 1058 aaKnown RBP10.98□□□□□ -0.65
PABPN1-208ENST00000557702 CD52P31358 61 aa10.98□□□□□ -0.65
PABPN1-208ENST00000557702 SP2Q02086 613 aa10.98□□□□□ -0.65
PABPN1-208ENST00000557702 APOBRQ0VD83 1088 aa10.98□□□□□ -0.65
PABPN1-208ENST00000557702 ITPRIPQ8IWB1 547 aa10.98□□□□□ -0.65
PABPN1-208ENST00000557702 LMBR1Q8WVP7 490 aa10.98□□□□□ -0.65
PABPN1-208ENST00000557702 MRPS27Q92552 414 aaKnown RBP10.98□□□□□ -0.65
PABPN1-208ENST00000557702 ACSF2Q96CM8 615 aaPredicted RBP10.98□□□□□ -0.65
PABPN1-208ENST00000557702 NAPBQ9H115 298 aa10.98□□□□□ -0.65
PABPN1-208ENST00000557702 AGO3Q9H9G7 860 aaKnown RBP10.98□□□□□ -0.65
PABPN1-208ENST00000557702 WNT16Q9UBV4 365 aa10.98□□□□□ -0.65
PABPN1-208ENST00000557702 ZNF215Q9UL58 517 aaPredicted RBP10.98□□□□□ -0.65
PABPN1-208ENST00000557702 SUPT16HQ9Y5B9 1047 aaKnown RBP10.98□□□□□ -0.65
PABPN1-208ENST00000557702 PCDHB7Q9Y5E2 793 aa10.98□□□□□ -0.65
PABPN1-208ENST00000557702 HCFC2Q9Y5Z7 792 aa10.98□□□□□ -0.65
PABPN1-208ENST00000557702 CDY2AQ9Y6F7 541 aa10.98□□□□□ -0.65
PABPN1-208ENST00000557702 ABCB11O95342 1321 aa10.98□□□□□ -0.65
PABPN1-208ENST00000557702 CACNA1IQ9P0X4 2223 aa10.98□□□□□ -0.65
PABPN1-208ENST00000557702 KIAA1671Q9BY89 1806 aa10.98□□□□□ -0.65
PABPN1-208ENST00000557702 TBKBP1A7MCY6 615 aa10.97□□□□□ -0.65
PABPN1-208ENST00000557702 HIDE1A8MVS5 230 aa10.97□□□□□ -0.65
PABPN1-208ENST00000557702 RNF113AO15541 343 aaKnown RBP10.97□□□□□ -0.65
PABPN1-208ENST00000557702 MYCLP12524 364 aaPredicted RBP10.97□□□□□ -0.65
PABPN1-208ENST00000557702 PLCB3Q01970 1234 aa10.97□□□□□ -0.65
PABPN1-208ENST00000557702 PPM1JQ5JR12 505 aa10.97□□□□□ -0.65
PABPN1-208ENST00000557702 SPECC1Q5M775 1068 aa10.97□□□□□ -0.65
PABPN1-208ENST00000557702 RARS2Q5T160 578 aaKnown RBP10.97□□□□□ -0.65
PABPN1-208ENST00000557702 KIAA1841Q6NSI8 718 aa10.97□□□□□ -0.65
PABPN1-208ENST00000557702 FTSJ3Q8IY81 847 aaKnown RBP10.97□□□□□ -0.65
PABPN1-208ENST00000557702 COLGALT1Q8NBJ5 622 aa10.97□□□□□ -0.65
PABPN1-208ENST00000557702 TMEM47Q9BQJ4 181 aa10.97□□□□□ -0.65
PABPN1-208ENST00000557702 KCNK12Q9HB15 430 aa10.97□□□□□ -0.65
PABPN1-208ENST00000557702 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.97□□□□□ -0.65
PABPN1-208ENST00000557702 FANCMQ8IYD8 2048 aa10.97□□□□□ -0.65
PABPN1-208ENST00000557702 KAT6AQ92794 2004 aa10.96□□□□□ -0.65
PABPN1-208ENST00000557702 KRBA1A5PL33 1030 aa10.96□□□□□ -0.65
PABPN1-208ENST00000557702 M0R2C6 588 aa10.96□□□□□ -0.65
PABPN1-208ENST00000557702 RAB11FIP3O75154 756 aa10.96□□□□□ -0.65
PABPN1-208ENST00000557702 DCNP07585 359 aaKnown RBP10.96□□□□□ -0.65
PABPN1-208ENST00000557702 ZFYP08048 801 aaPredicted RBP10.96□□□□□ -0.65
PABPN1-208ENST00000557702 IBSPP21815 317 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms