RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 CAGE1Q8TC20 777 aa17.98■□□□□ 0.47
TUBB3-214ENST00000557490 NECAB3Q96P71 396 aaPredicted RBP17.98■□□□□ 0.47
TUBB3-214ENST00000557490 WNT8AQ9H1J5 351 aa17.98■□□□□ 0.47
TUBB3-214ENST00000557490 HCN4Q9Y3Q4 1203 aa17.98■□□□□ 0.47
TUBB3-214ENST00000557490 XIRP2A4UGR9 3374 aa17.98■□□□□ 0.47
TUBB3-214ENST00000557490 EMSYQ7Z589 1322 aa17.98■□□□□ 0.47
TUBB3-214ENST00000557490 CYP3A7-CYP3A51PA0A087WV96 503 aa17.97■□□□□ 0.47
TUBB3-214ENST00000557490 DHX15O43143 795 aaKnown RBP17.97■□□□□ 0.47
TUBB3-214ENST00000557490 EDIL3O43854 480 aa17.97■□□□□ 0.47
TUBB3-214ENST00000557490 LGR5O75473 907 aa17.97■□□□□ 0.47
TUBB3-214ENST00000557490 CYP3A7P24462 503 aa17.97■□□□□ 0.47
TUBB3-214ENST00000557490 MCM2P49736 904 aa17.97■□□□□ 0.47
TUBB3-214ENST00000557490 ZNF200P98182 395 aaPredicted RBP17.97■□□□□ 0.47
TUBB3-214ENST00000557490 Q4G0T1 1027 aa17.97■□□□□ 0.47
TUBB3-214ENST00000557490 MIS18BP1Q6P0N0 1132 aa17.97■□□□□ 0.47
TUBB3-214ENST00000557490 MOXD1Q6UVY6 613 aa17.97■□□□□ 0.47
TUBB3-214ENST00000557490 PIK3AP1Q6ZUJ8 805 aa17.97■□□□□ 0.47
TUBB3-214ENST00000557490 RPUSD2Q8IZ73 545 aaKnown RBP17.97■□□□□ 0.47
TUBB3-214ENST00000557490 FAM184AQ8NB25 1140 aa17.97■□□□□ 0.47
TUBB3-214ENST00000557490 OXER1Q8TDS5 423 aa17.97■□□□□ 0.47
TUBB3-214ENST00000557490 ATP6V0A1Q93050 837 aa17.97■□□□□ 0.47
TUBB3-214ENST00000557490 LENG9Q96B70 501 aa17.97■□□□□ 0.47
TUBB3-214ENST00000557490 CTAGE1Q96RT6 745 aa17.97■□□□□ 0.47
TUBB3-214ENST00000557490 IL23AQ9NPF7 189 aa17.97■□□□□ 0.47
TUBB3-214ENST00000557490 REV3LO60673 3130 aa17.97■□□□□ 0.47
TUBB3-214ENST00000557490 BACH1O14867 736 aa17.96■□□□□ 0.47
TUBB3-214ENST00000557490 MSH4O15457 936 aa17.96■□□□□ 0.47
TUBB3-214ENST00000557490 ATG7O95352 703 aa17.96■□□□□ 0.47
TUBB3-214ENST00000557490 TDP2O95551 362 aa17.96■□□□□ 0.47
TUBB3-214ENST00000557490 CCNE2O96020 404 aa17.96■□□□□ 0.47
TUBB3-214ENST00000557490 MMP1P03956 469 aa17.96■□□□□ 0.47
TUBB3-214ENST00000557490 ACRP10323 421 aa17.96■□□□□ 0.47
TUBB3-214ENST00000557490 MARK3P27448 753 aa17.96■□□□□ 0.47
TUBB3-214ENST00000557490 STAT5BP51692 787 aa17.96■□□□□ 0.47
TUBB3-214ENST00000557490 KRT76Q01546 638 aa17.96■□□□□ 0.47
TUBB3-214ENST00000557490 SAFBQ15424 915 aaKnown RBP eCLIP17.96■□□□□ 0.47
TUBB3-214ENST00000557490 LETM2Q2VYF4 491 aa17.96■□□□□ 0.47
TUBB3-214ENST00000557490 FAM160B1Q5W0V3 765 aa17.96■□□□□ 0.47
TUBB3-214ENST00000557490 KRT40Q6A162 431 aa17.96■□□□□ 0.47
TUBB3-214ENST00000557490 ZNF746Q6NUN9 644 aaPredicted RBP17.96■□□□□ 0.47
TUBB3-214ENST00000557490 PSRC1Q6PGN9 363 aaPredicted RBP17.96■□□□□ 0.47
TUBB3-214ENST00000557490 NEK8Q86SG6 692 aa17.96■□□□□ 0.47
TUBB3-214ENST00000557490 AFAP1L1Q8TED9 768 aa17.96■□□□□ 0.47
TUBB3-214ENST00000557490 TNPO1Q92973 898 aaKnown RBP17.96■□□□□ 0.47
TUBB3-214ENST00000557490 SCLYQ96I15 445 aa17.96■□□□□ 0.47
TUBB3-214ENST00000557490 C8orf76Q96K31 380 aa17.96■□□□□ 0.47
TUBB3-214ENST00000557490 NAP1L4Q99733 375 aaKnown RBP17.96■□□□□ 0.47
TUBB3-214ENST00000557490 RNPEPQ9H4A4 650 aa17.96■□□□□ 0.47
TUBB3-214ENST00000557490 SETD4Q9NVD3 440 aa17.96■□□□□ 0.47
TUBB3-214ENST00000557490 NRCAMQ92823 1304 aa17.96■□□□□ 0.46
TUBB3-214ENST00000557490 DOCK5Q9H7D0 1870 aa17.95■□□□□ 0.46
TUBB3-214ENST00000557490 GAS7O60861 476 aa17.95■□□□□ 0.46
TUBB3-214ENST00000557490 HOXC8P31273 242 aa17.95■□□□□ 0.46
TUBB3-214ENST00000557490 RFC2P35250 354 aa17.95■□□□□ 0.46
TUBB3-214ENST00000557490 PPFIA1Q13136 1202 aa17.95■□□□□ 0.46
TUBB3-214ENST00000557490 NR5A1Q13285 461 aa17.95■□□□□ 0.46
TUBB3-214ENST00000557490 HIC1Q14526 733 aa17.95■□□□□ 0.46
TUBB3-214ENST00000557490 ABHD15Q6UXT9 468 aa17.95■□□□□ 0.46
TUBB3-214ENST00000557490 PLPPR4Q7Z2D5 763 aa17.95■□□□□ 0.46
TUBB3-214ENST00000557490 SMAP1Q8IYB5 467 aaPredicted RBP17.95■□□□□ 0.46
TUBB3-214ENST00000557490 DIS3L2Q8IYB7 885 aaKnown RBP17.95■□□□□ 0.46
TUBB3-214ENST00000557490 DHX38Q92620 1227 aaKnown RBP17.95■□□□□ 0.46
TUBB3-214ENST00000557490 SLC5A5Q92911 643 aa17.95■□□□□ 0.46
TUBB3-214ENST00000557490 TIFAQ96CG3 184 aa17.95■□□□□ 0.46
TUBB3-214ENST00000557490 MBOAT7Q96N66 472 aa17.95■□□□□ 0.46
TUBB3-214ENST00000557490 PCYT2Q99447 389 aa17.95■□□□□ 0.46
TUBB3-214ENST00000557490 GAS2L1Q99501 681 aaPredicted RBP17.95■□□□□ 0.46
TUBB3-214ENST00000557490 RIT2Q99578 217 aa17.95■□□□□ 0.46
TUBB3-214ENST00000557490 DDX25Q9UHL0 483 aaKnown RBP17.95■□□□□ 0.46
TUBB3-214ENST00000557490 CHD7Q9P2D1 2997 aa17.95■□□□□ 0.46
TUBB3-214ENST00000557490 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.94■□□□□ 0.46
TUBB3-214ENST00000557490 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.94■□□□□ 0.46
TUBB3-214ENST00000557490 TREHO43280 583 aa17.94■□□□□ 0.46
TUBB3-214ENST00000557490 PFKMP08237 780 aa17.94■□□□□ 0.46
TUBB3-214ENST00000557490 IQCF3P0C7M6 154 aa17.94■□□□□ 0.46
TUBB3-214ENST00000557490 SELPP16109 830 aa17.94■□□□□ 0.46
TUBB3-214ENST00000557490 GCFC2P16383 781 aaKnown RBP17.94■□□□□ 0.46
TUBB3-214ENST00000557490 SLC26A2P50443 739 aa17.94■□□□□ 0.46
TUBB3-214ENST00000557490 RBL2Q08999 1139 aa17.94■□□□□ 0.46
TUBB3-214ENST00000557490 TMEM240Q5SV17 173 aa17.94■□□□□ 0.46
TUBB3-214ENST00000557490 LRCH2Q5VUJ6 765 aa17.94■□□□□ 0.46
TUBB3-214ENST00000557490 ZNF365Q70YC5 407 aa17.94■□□□□ 0.46
TUBB3-214ENST00000557490 C16orf59Q7L2K0 433 aa17.94■□□□□ 0.46
TUBB3-214ENST00000557490 SERINC5Q86VE9 423 aa17.94■□□□□ 0.46
TUBB3-214ENST00000557490 LMBR1Q8WVP7 490 aa17.94■□□□□ 0.46
TUBB3-214ENST00000557490 TMX3Q96JJ7 454 aa17.94■□□□□ 0.46
TUBB3-214ENST00000557490 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.94■□□□□ 0.462e-6■□□□□ 8.5
TUBB3-214ENST00000557490 LRFN3Q9BTN0 628 aa17.94■□□□□ 0.46
TUBB3-214ENST00000557490 TEKT3Q9BXF9 490 aa17.94■□□□□ 0.46
TUBB3-214ENST00000557490 TRPC6Q9Y210 931 aa17.94■□□□□ 0.46
TUBB3-214ENST00000557490 SAMM50Q9Y512 469 aa17.94■□□□□ 0.46
TUBB3-214ENST00000557490 IGKV6D-21A0A0A0MT36 114 aa17.93■□□□□ 0.46
TUBB3-214ENST00000557490 BTBD18B2RXH4 712 aa17.93■□□□□ 0.46
TUBB3-214ENST00000557490 CCNT1O60563 726 aaKnown RBP17.93■□□□□ 0.46
TUBB3-214ENST00000557490 PARNO95453 639 aaKnown RBP17.93■□□□□ 0.46
TUBB3-214ENST00000557490 FGBP02675 491 aa17.93■□□□□ 0.46
TUBB3-214ENST00000557490 PSAPP07602 524 aa17.93■□□□□ 0.46
TUBB3-214ENST00000557490 CKBP12277 381 aa17.93■□□□□ 0.46
TUBB3-214ENST00000557490 THPOP40225 353 aa17.93■□□□□ 0.46
TUBB3-214ENST00000557490 GUCY1B3Q02153 619 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms