RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 MICAL3Q7RTP6 2002 aa18.15■□□□□ 0.5
TUBB3-213ENST00000557262 KLF18A0A0U1RQI7 1052 aa18.15■□□□□ 0.5
TUBB3-213ENST00000557262 GOLGA8AA7E2F4 631 aa18.15■□□□□ 0.5
TUBB3-213ENST00000557262 GOLGA8BA8MQT2 603 aa18.15■□□□□ 0.5
TUBB3-213ENST00000557262 STXBP3O00186 592 aa18.15■□□□□ 0.5
TUBB3-213ENST00000557262 RPLP2P05387 115 aaKnown RBP18.15■□□□□ 0.5
TUBB3-213ENST00000557262 ARP10275 920 aa18.15■□□□□ 0.5
TUBB3-213ENST00000557262 INSRRP14616 1297 aa18.15■□□□□ 0.5
TUBB3-213ENST00000557262 CDC27P30260 824 aa18.15■□□□□ 0.5
TUBB3-213ENST00000557262 RCAN1P53805 252 aa18.15■□□□□ 0.5
TUBB3-213ENST00000557262 MGAT3Q09327 533 aa18.15■□□□□ 0.5
TUBB3-213ENST00000557262 EPC2Q52LR7 807 aa18.15■□□□□ 0.5
TUBB3-213ENST00000557262 CEP55Q53EZ4 464 aa18.15■□□□□ 0.5
TUBB3-213ENST00000557262 DNAJB3Q8WWF6 145 aa18.15■□□□□ 0.5
TUBB3-213ENST00000557262 PGBD1Q96JS3 809 aa18.15■□□□□ 0.5
TUBB3-213ENST00000557262 BARHL2Q9NY43 387 aa18.15■□□□□ 0.5
TUBB3-213ENST00000557262 NFASCO94856 1347 aa18.15■□□□□ 0.5
TUBB3-213ENST00000557262 COL4A4P53420 1690 aaPredicted RBP18.15■□□□□ 0.5
TUBB3-213ENST00000557262 MEIS1O00470 390 aa18.14■□□□□ 0.49
TUBB3-213ENST00000557262 GHRP10912 638 aa18.14■□□□□ 0.49
TUBB3-213ENST00000557262 IGBP1P78318 339 aa18.14■□□□□ 0.49
TUBB3-213ENST00000557262 FGD1P98174 961 aa18.14■□□□□ 0.49
TUBB3-213ENST00000557262 AP3B2Q13367 1082 aa18.14■□□□□ 0.49
TUBB3-213ENST00000557262 LPIN1Q14693 890 aa18.14■□□□□ 0.49
TUBB3-213ENST00000557262 PLPPR4Q7Z2D5 763 aa18.14■□□□□ 0.49
TUBB3-213ENST00000557262 ANO3Q9BYT9 981 aa18.14■□□□□ 0.49
TUBB3-213ENST00000557262 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.13■□□□□ 0.49
TUBB3-213ENST00000557262 CCDC196A0A1B0GTZ2 297 aa18.13■□□□□ 0.49
TUBB3-213ENST00000557262 H3BNC9 293 aa18.13■□□□□ 0.49
TUBB3-213ENST00000557262 ENPP3O14638 875 aa18.13■□□□□ 0.49
TUBB3-213ENST00000557262 ATG7O95352 703 aa18.13■□□□□ 0.49
TUBB3-213ENST00000557262 ZNF76P36508 570 aa18.13■□□□□ 0.49
TUBB3-213ENST00000557262 CLK2P49760 499 aaKnown RBP18.13■□□□□ 0.49
TUBB3-213ENST00000557262 STAT5BP51692 787 aa18.13■□□□□ 0.49
TUBB3-213ENST00000557262 ACTR2P61160 394 aa18.13■□□□□ 0.49
TUBB3-213ENST00000557262 PTPROQ16827 1216 aa18.13■□□□□ 0.49
TUBB3-213ENST00000557262 FBXO47Q5MNV8 452 aa18.13■□□□□ 0.49
TUBB3-213ENST00000557262 TMEM192Q8IY95 271 aa18.13■□□□□ 0.49
TUBB3-213ENST00000557262 KCNB2Q92953 911 aa18.13■□□□□ 0.49
TUBB3-213ENST00000557262 MRPL38Q96DV4 380 aaKnown RBP18.13■□□□□ 0.49
TUBB3-213ENST00000557262 IL17RAQ96F46 866 aa18.13■□□□□ 0.49
TUBB3-213ENST00000557262 AGO4Q9HCK5 861 aaKnown RBP18.13■□□□□ 0.49
TUBB3-213ENST00000557262 TMEM260Q9NX78 707 aa18.13■□□□□ 0.49
TUBB3-213ENST00000557262 NAP1L2Q9ULW6 460 aaPredicted RBP18.13■□□□□ 0.49
TUBB3-213ENST00000557262 CDY2AQ9Y6F7 541 aa18.13■□□□□ 0.49
TUBB3-213ENST00000557262 SIP14410 1827 aa18.12■□□□□ 0.49
TUBB3-213ENST00000557262 ADD1P35611 737 aaKnown RBP18.12■□□□□ 0.49
TUBB3-213ENST00000557262 SREBF1P36956 1147 aa18.12■□□□□ 0.49
TUBB3-213ENST00000557262 MRPS6P82932 125 aaKnown RBP18.12■□□□□ 0.49
TUBB3-213ENST00000557262 GPM6BQ13491 265 aa18.12■□□□□ 0.49
TUBB3-213ENST00000557262 PLCB4Q15147 1175 aa18.12■□□□□ 0.49
TUBB3-213ENST00000557262 IER5Q5VY09 327 aa18.12■□□□□ 0.49
TUBB3-213ENST00000557262 NIPA1Q7RTP0 329 aa18.12■□□□□ 0.49
TUBB3-213ENST00000557262 TRPC6Q9Y210 931 aa18.12■□□□□ 0.49
TUBB3-213ENST00000557262 SQORQ9Y6N5 450 aa18.12■□□□□ 0.49
TUBB3-213ENST00000557262 BDP1A6H8Y1 2624 aa18.12■□□□□ 0.49
TUBB3-213ENST00000557262 METAP2P50579 478 aaKnown RBP eCLIP18.11■□□□□ 0.49
TUBB3-213ENST00000557262 ITGB3BPQ13352 177 aaPredicted RBP18.11■□□□□ 0.49
TUBB3-213ENST00000557262 PFKFB3Q16875 520 aaPredicted RBP18.11■□□□□ 0.49
TUBB3-213ENST00000557262 TSHZ1Q6ZSZ6 1077 aa18.11■□□□□ 0.49
TUBB3-213ENST00000557262 Q6ZUG5 572 aa18.11■□□□□ 0.49
TUBB3-213ENST00000557262 FIBCD1Q8N539 461 aa18.11■□□□□ 0.49
TUBB3-213ENST00000557262 FAM49AQ9H0Q0 323 aaPredicted RBP18.11■□□□□ 0.49
TUBB3-213ENST00000557262 UBE2ZQ9H832 354 aaPredicted RBP18.11■□□□□ 0.49
TUBB3-213ENST00000557262 PCDHA2Q9Y5H9 948 aa18.11■□□□□ 0.49
TUBB3-213ENST00000557262 POTEB3A0JP26 581 aa18.1■□□□□ 0.49
TUBB3-213ENST00000557262 SCG2P13521 617 aa18.1■□□□□ 0.49
TUBB3-213ENST00000557262 CPA1P15085 419 aa18.1■□□□□ 0.49
TUBB3-213ENST00000557262 SLC26A2P50443 739 aa18.1■□□□□ 0.49
TUBB3-213ENST00000557262 APOBRQ0VD83 1088 aa18.1■□□□□ 0.49
TUBB3-213ENST00000557262 JAKMIP3Q5VZ66 844 aa18.1■□□□□ 0.49
TUBB3-213ENST00000557262 MCTP2Q6DN12 878 aa18.1■□□□□ 0.49
TUBB3-213ENST00000557262 POTEBQ6S5H4 581 aa18.1■□□□□ 0.49
TUBB3-213ENST00000557262 PLA2G4DQ86XP0 818 aa18.1■□□□□ 0.49
TUBB3-213ENST00000557262 NME8Q8N427 588 aa18.1■□□□□ 0.49
TUBB3-213ENST00000557262 ZBTB10Q96DT7 871 aa18.1■□□□□ 0.49
TUBB3-213ENST00000557262 AGO3Q9H9G7 860 aaKnown RBP18.1■□□□□ 0.49
TUBB3-213ENST00000557262 IGKV6D-21A0A0A0MT36 114 aa18.09■□□□□ 0.49
TUBB3-213ENST00000557262 M0QZ92 97 aa18.09■□□□□ 0.49
TUBB3-213ENST00000557262 RB1P06400 928 aa18.09■□□□□ 0.49
TUBB3-213ENST00000557262 CYP3A4P08684 503 aa18.09■□□□□ 0.49
TUBB3-213ENST00000557262 COL9A1P20849 921 aa18.09■□□□□ 0.49
TUBB3-213ENST00000557262 HSPA4P34932 840 aa18.09■□□□□ 0.49
TUBB3-213ENST00000557262 ABHD15Q6UXT9 468 aa18.09■□□□□ 0.49
TUBB3-213ENST00000557262 TRAPPC12Q8WVT3 735 aa18.09■□□□□ 0.49
TUBB3-213ENST00000557262 BRF1Q92994 677 aa18.09■□□□□ 0.49
TUBB3-213ENST00000557262 JAKMIP1Q96N16 626 aaKnown RBP18.09■□□□□ 0.49
TUBB3-213ENST00000557262 ZMYND12Q9H0C1 365 aa18.09■□□□□ 0.49
TUBB3-213ENST00000557262 C6orf50Q9HD87 102 aa18.09■□□□□ 0.49
TUBB3-213ENST00000557262 TRPV2Q9Y5S1 764 aa18.09■□□□□ 0.49
TUBB3-213ENST00000557262 SNX14Q9Y5W7 946 aa18.09■□□□□ 0.49
TUBB3-213ENST00000557262 BRWD1Q9NSI6 2320 aa18.09■□□□□ 0.49
TUBB3-213ENST00000557262 SMIM35A0A1B0GVV1 85 aa18.08■□□□□ 0.48
TUBB3-213ENST00000557262 ESYT2A0FGR8 921 aa18.08■□□□□ 0.48
TUBB3-213ENST00000557262 FAM86B1E9PN63 330 aa18.08■□□□□ 0.48
TUBB3-213ENST00000557262 DDX39AO00148 427 aaKnown RBP18.08■□□□□ 0.48
TUBB3-213ENST00000557262 DHX15O43143 795 aaKnown RBP18.08■□□□□ 0.48
TUBB3-213ENST00000557262 PRPF3O43395 683 aaKnown RBP18.08■□□□□ 0.48
TUBB3-213ENST00000557262 HBP1O60381 514 aa18.08■□□□□ 0.48
TUBB3-213ENST00000557262 CCNE2O96020 404 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms