RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 AZI2Q9H6S1 392 aa25.81■■□□□ 1.72
TMEM260-214ENST00000556975 RRN3P2A6NIE6 340 aa25.8■■□□□ 1.72
TMEM260-214ENST00000556975 TLL1O43897 1013 aa25.8■■□□□ 1.72
TMEM260-214ENST00000556975 GJB5O95377 273 aa25.8■■□□□ 1.72
TMEM260-214ENST00000556975 MARK3P27448 753 aa25.8■■□□□ 1.72
TMEM260-214ENST00000556975 MARCH8Q5T0T0 291 aa25.8■■□□□ 1.72
TMEM260-214ENST00000556975 PLA2G4DQ86XP0 818 aa25.8■■□□□ 1.72
TMEM260-214ENST00000556975 PDRG1Q9NUG6 133 aa25.8■■□□□ 1.72
TMEM260-214ENST00000556975 IGKV6D-21A0A0A0MT36 114 aa25.79■■□□□ 1.72
TMEM260-214ENST00000556975 DHX15O43143 795 aaKnown RBP25.79■■□□□ 1.72
TMEM260-214ENST00000556975 PPFIA3O75145 1194 aa25.79■■□□□ 1.72
TMEM260-214ENST00000556975 CIITAP33076 1130 aa25.79■■□□□ 1.72
TMEM260-214ENST00000556975 STAT5BP51692 787 aa25.79■■□□□ 1.72
TMEM260-214ENST00000556975 TAP1Q03518 808 aa25.79■■□□□ 1.72
TMEM260-214ENST00000556975 TRIM22Q8IYM9 498 aa25.79■■□□□ 1.72
TMEM260-214ENST00000556975 VPS54Q9P1Q0 977 aa25.79■■□□□ 1.72
TMEM260-214ENST00000556975 TUBE1Q9UJT0 475 aa25.79■■□□□ 1.72
TMEM260-214ENST00000556975 CTSHP09668 335 aa25.78■■□□□ 1.72
TMEM260-214ENST00000556975 INSRRP14616 1297 aa25.78■■□□□ 1.72
TMEM260-214ENST00000556975 SLC26A2P50443 739 aa25.78■■□□□ 1.72
TMEM260-214ENST00000556975 SETQ01105 290 aaPredicted RBP25.78■■□□□ 1.72
TMEM260-214ENST00000556975 SSRP1Q08945 709 aaKnown RBP25.78■■□□□ 1.72
TMEM260-214ENST00000556975 ABHD15Q6UXT9 468 aa25.78■■□□□ 1.72
TMEM260-214ENST00000556975 RUFY4Q6ZNE9 571 aa25.78■■□□□ 1.72
TMEM260-214ENST00000556975 USP38Q8NB14 1042 aa25.78■■□□□ 1.72
TMEM260-214ENST00000556975 SEPT8Q92599 483 aa25.78■■□□□ 1.72
TMEM260-214ENST00000556975 RAD9AQ99638 391 aa25.78■■□□□ 1.72
TMEM260-214ENST00000556975 OSBPL7Q9BZF2 842 aa25.78■■□□□ 1.72
TMEM260-214ENST00000556975 NCOR1O75376 2440 aa25.78■■□□□ 1.72
TMEM260-214ENST00000556975 SPTBN5Q9NRC6 3674 aaKnown RBP25.77■■□□□ 1.72
TMEM260-214ENST00000556975 IPO5O00410 1097 aaKnown RBP25.77■■□□□ 1.72
TMEM260-214ENST00000556975 ARHGEF15O94989 841 aa25.77■■□□□ 1.72
TMEM260-214ENST00000556975 CCNE2O96020 404 aa25.77■■□□□ 1.72
TMEM260-214ENST00000556975 CHRNA1P02708 482 aa25.77■■□□□ 1.72
TMEM260-214ENST00000556975 RPLP2P05387 115 aaKnown RBP25.77■■□□□ 1.72
TMEM260-214ENST00000556975 POU3F3P20264 500 aaPredicted RBP25.77■■□□□ 1.72
TMEM260-214ENST00000556975 ANAPC15P60006 121 aa25.77■■□□□ 1.72
TMEM260-214ENST00000556975 PLCB4Q15147 1175 aa25.77■■□□□ 1.72
TMEM260-214ENST00000556975 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.77■■□□□ 1.72
TMEM260-214ENST00000556975 TMCO2Q7Z6W1 182 aaPredicted RBP25.77■■□□□ 1.72
TMEM260-214ENST00000556975 RSPH3Q86UC2 560 aa25.77■■□□□ 1.72
TMEM260-214ENST00000556975 FAM177A1Q8N128 213 aaPredicted RBP25.77■■□□□ 1.72
TMEM260-214ENST00000556975 LARP6Q9BRS8 491 aaKnown RBP25.77■■□□□ 1.72
TMEM260-214ENST00000556975 ZBED2Q9BTP6 218 aa25.77■■□□□ 1.72
TMEM260-214ENST00000556975 TBC1D22BQ9NU19 505 aa25.77■■□□□ 1.72
TMEM260-214ENST00000556975 MICAL3Q7RTP6 2002 aa25.76■■□□□ 1.72
TMEM260-214ENST00000556975 CPLX1O14810 134 aa25.76■■□□□ 1.71
TMEM260-214ENST00000556975 DEXIO95424 95 aa25.76■■□□□ 1.71
TMEM260-214ENST00000556975 IGFBP4P22692 258 aa25.76■■□□□ 1.71
TMEM260-214ENST00000556975 MGAT3Q09327 533 aa25.76■■□□□ 1.71
TMEM260-214ENST00000556975 CPLX2Q6PUV4 134 aaKnown RBP25.76■■□□□ 1.71
TMEM260-214ENST00000556975 RASGRP4Q8TDF6 673 aa25.76■■□□□ 1.71
TMEM260-214ENST00000556975 APBB2Q92870 758 aa25.76■■□□□ 1.71
TMEM260-214ENST00000556975 AMHP03971 560 aa25.75■■□□□ 1.71
TMEM260-214ENST00000556975 ZNF577Q9BSK1 485 aa25.75■■□□□ 1.71
TMEM260-214ENST00000556975 LCHNA4D1U4 455 aa25.74■■□□□ 1.71
TMEM260-214ENST00000556975 RBAK-RBAKDNI3L0D1 243 aa25.74■■□□□ 1.71
TMEM260-214ENST00000556975 EDIL3O43854 480 aa25.74■■□□□ 1.71
TMEM260-214ENST00000556975 CENPBP07199 599 aaPredicted RBP25.74■■□□□ 1.71
TMEM260-214ENST00000556975 USP11P51784 963 aa25.74■■□□□ 1.71
TMEM260-214ENST00000556975 NLRP5P59047 1200 aa25.74■■□□□ 1.71
TMEM260-214ENST00000556975 DNAJB3Q8WWF6 145 aa25.74■■□□□ 1.71
TMEM260-214ENST00000556975 IL17RAQ96F46 866 aa25.74■■□□□ 1.71
TMEM260-214ENST00000556975 TRPC6Q9Y210 931 aa25.74■■□□□ 1.71
TMEM260-214ENST00000556975 PCDHA2Q9Y5H9 948 aa25.74■■□□□ 1.71
TMEM260-214ENST00000556975 TRANK1O15050 2925 aa25.74■■□□□ 1.71
TMEM260-214ENST00000556975 POTEB3A0JP26 581 aa25.73■■□□□ 1.71
TMEM260-214ENST00000556975 DDX39AO00148 427 aaKnown RBP25.73■■□□□ 1.71
TMEM260-214ENST00000556975 IGBP1P78318 339 aa25.73■■□□□ 1.71
TMEM260-214ENST00000556975 STK3Q13188 491 aa25.73■■□□□ 1.71
TMEM260-214ENST00000556975 FAM160B1Q5W0V3 765 aa25.73■■□□□ 1.71
TMEM260-214ENST00000556975 ZNF746Q6NUN9 644 aaPredicted RBP25.73■■□□□ 1.71
TMEM260-214ENST00000556975 POTEBQ6S5H4 581 aa25.73■■□□□ 1.71
TMEM260-214ENST00000556975 LENG9Q96B70 501 aa25.73■■□□□ 1.71
TMEM260-214ENST00000556975 IFIH1Q9BYX4 1025 aaKnown RBP25.73■■□□□ 1.71
TMEM260-214ENST00000556975 C22orf23Q9BZE7 217 aa25.73■■□□□ 1.71
TMEM260-214ENST00000556975 CERS4Q9HA82 394 aa25.73■■□□□ 1.71
TMEM260-214ENST00000556975 PCDHA4Q9UN74 947 aa25.73■■□□□ 1.71
TMEM260-214ENST00000556975 INSL6Q9Y581 213 aa25.73■■□□□ 1.71
TMEM260-214ENST00000556975 EPOPA6NHQ4 379 aa25.72■■□□□ 1.71
TMEM260-214ENST00000556975 HBP1O60381 514 aa25.72■■□□□ 1.71
TMEM260-214ENST00000556975 EIF5BO60841 1220 aaKnown RBP25.72■■□□□ 1.71
TMEM260-214ENST00000556975 HTRA4P83105 476 aaPredicted RBP25.72■■□□□ 1.71
TMEM260-214ENST00000556975 PRR16Q569H4 304 aa25.72■■□□□ 1.71
TMEM260-214ENST00000556975 MIS18BP1Q6P0N0 1132 aa25.72■■□□□ 1.71
TMEM260-214ENST00000556975 CCDC60Q8IWA6 550 aaPredicted RBP25.72■■□□□ 1.71
TMEM260-214ENST00000556975 ARNTL2Q8WYA1 636 aa25.72■■□□□ 1.71
TMEM260-214ENST00000556975 TOP1MTQ969P6 601 aa25.72■■□□□ 1.71
TMEM260-214ENST00000556975 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.71■■□□□ 1.71
TMEM260-214ENST00000556975 M0R2N6 131 aa25.71■■□□□ 1.71
TMEM260-214ENST00000556975 RFXAPO00287 272 aa25.71■■□□□ 1.71
TMEM260-214ENST00000556975 BACH1O14867 736 aa25.71■■□□□ 1.71
TMEM260-214ENST00000556975 KRT76Q01546 638 aa25.71■■□□□ 1.71
TMEM260-214ENST00000556975 SCRN1Q12765 414 aa25.71■■□□□ 1.71
TMEM260-214ENST00000556975 GALNT17Q6IS24 598 aa25.71■■□□□ 1.71
TMEM260-214ENST00000556975 SMAP1Q8IYB5 467 aaPredicted RBP25.71■■□□□ 1.71
TMEM260-214ENST00000556975 MYOCDQ8IZQ8 938 aa25.71■■□□□ 1.71
TMEM260-214ENST00000556975 DAGLBQ8NCG7 672 aa25.71■■□□□ 1.71
TMEM260-214ENST00000556975 ATP8B4Q8TF62 1192 aa25.71■■□□□ 1.71
TMEM260-214ENST00000556975 PPM1EQ8WY54 764 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms