RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 EARS2Q5JPH6 523 aaKnown RBP25.88■■□□□ 1.73
TDP1-216ENST00000556867 TMEM240Q5SV17 173 aa25.88■■□□□ 1.73
TDP1-216ENST00000556867 PPP4R3AQ6IN85 833 aa25.88■■□□□ 1.73
TDP1-216ENST00000556867 MIS18BP1Q6P0N0 1132 aa25.88■■□□□ 1.73
TDP1-216ENST00000556867 SMAP1Q8IYB5 467 aaPredicted RBP25.88■■□□□ 1.73
TDP1-216ENST00000556867 LMBR1Q8WVP7 490 aa25.88■■□□□ 1.73
TDP1-216ENST00000556867 WNT8BQ93098 351 aa25.88■■□□□ 1.73
TDP1-216ENST00000556867 C8orf76Q96K31 380 aa25.88■■□□□ 1.73
TDP1-216ENST00000556867 NAP1L4Q99733 375 aaKnown RBP25.88■■□□□ 1.73
TDP1-216ENST00000556867 DDX25Q9UHL0 483 aaKnown RBP25.88■■□□□ 1.73
TDP1-216ENST00000556867 BTBD18B2RXH4 712 aa25.87■■□□□ 1.73
TDP1-216ENST00000556867 SOX1O00570 391 aaPredicted RBP25.87■■□□□ 1.73
TDP1-216ENST00000556867 TREHO43280 583 aa25.87■■□□□ 1.73
TDP1-216ENST00000556867 PFKMP08237 780 aa25.87■■□□□ 1.73
TDP1-216ENST00000556867 SELPP16109 830 aa25.87■■□□□ 1.73
TDP1-216ENST00000556867 SLC26A2P50443 739 aa25.87■■□□□ 1.73
TDP1-216ENST00000556867 PPFIA1Q13136 1202 aa25.87■■□□□ 1.73
TDP1-216ENST00000556867 RPUSD2Q8IZ73 545 aaKnown RBP25.87■■□□□ 1.73
TDP1-216ENST00000556867 ETNPPLQ8TBG4 499 aa25.87■■□□□ 1.73
TDP1-216ENST00000556867 VWCEQ96DN2 955 aa25.87■■□□□ 1.73
TDP1-216ENST00000556867 RNPC3Q96LT9 517 aaKnown RBP25.87■■□□□ 1.73
TDP1-216ENST00000556867 FAM205CA6NFA0 338 aa25.86■■□□□ 1.73
TDP1-216ENST00000556867 SLC37A4O43826 429 aa25.86■■□□□ 1.73
TDP1-216ENST00000556867 GAS7O60861 476 aa25.86■■□□□ 1.73
TDP1-216ENST00000556867 ACRP10323 421 aa25.86■■□□□ 1.73
TDP1-216ENST00000556867 CKBP12277 381 aa25.86■■□□□ 1.73
TDP1-216ENST00000556867 LRCH2Q5VUJ6 765 aa25.86■■□□□ 1.73
TDP1-216ENST00000556867 FAM160B1Q5W0V3 765 aa25.86■■□□□ 1.73
TDP1-216ENST00000556867 LRRC8DQ7L1W4 858 aa25.86■■□□□ 1.73
TDP1-216ENST00000556867 CCDC60Q8IWA6 550 aaPredicted RBP25.86■■□□□ 1.73
TDP1-216ENST00000556867 FAM184AQ8NB25 1140 aa25.86■■□□□ 1.73
TDP1-216ENST00000556867 TEKT3Q9BXF9 490 aa25.86■■□□□ 1.73
TDP1-216ENST00000556867 WDR64B1ANS9 1081 aa25.85■■□□□ 1.73
TDP1-216ENST00000556867 BACH1O14867 736 aa25.85■■□□□ 1.73
TDP1-216ENST00000556867 PSMD10O75832 226 aa25.85■■□□□ 1.73
TDP1-216ENST00000556867 PLCB4Q15147 1175 aa25.85■■□□□ 1.73
TDP1-216ENST00000556867 SAFBQ15424 915 aaKnown RBP eCLIP25.85■■□□□ 1.73
TDP1-216ENST00000556867 GRIK4Q16099 956 aa25.85■■□□□ 1.73
TDP1-216ENST00000556867 ZNF365Q70YC5 407 aa25.85■■□□□ 1.73
TDP1-216ENST00000556867 TNPO1Q92973 898 aaKnown RBP25.85■■□□□ 1.73
TDP1-216ENST00000556867 ZNF302Q9NR11 478 aa25.85■■□□□ 1.73
TDP1-216ENST00000556867 PCDHA10Q9Y5I2 948 aa25.85■■□□□ 1.73
TDP1-216ENST00000556867 TET1Q8NFU7 2136 aa25.85■■□□□ 1.73
TDP1-216ENST00000556867 LAMA2P24043 3122 aaKnown RBP25.85■■□□□ 1.73
TDP1-216ENST00000556867 PARNO95453 639 aaKnown RBP25.84■■□□□ 1.73
TDP1-216ENST00000556867 PSAPP07602 524 aa25.84■■□□□ 1.73
TDP1-216ENST00000556867 GUCY1B3Q02153 619 aa25.84■■□□□ 1.73
TDP1-216ENST00000556867 RASIP1Q5U651 963 aa25.84■■□□□ 1.73
TDP1-216ENST00000556867 TRAF7Q6Q0C0 670 aa25.84■■□□□ 1.73
TDP1-216ENST00000556867 FBXO18Q8NFZ0 1043 aa25.84■■□□□ 1.73
TDP1-216ENST00000556867 GJA10Q969M2 543 aa25.84■■□□□ 1.73
TDP1-216ENST00000556867 KCNMB3Q9NPA1 279 aa25.84■■□□□ 1.73
TDP1-216ENST00000556867 TRPC6Q9Y210 931 aa25.84■■□□□ 1.73
TDP1-216ENST00000556867 MBLAC1A4D2B0 266 aaPredicted RBP25.83■■□□□ 1.73
TDP1-216ENST00000556867 RRN3P2A6NIE6 340 aa25.83■■□□□ 1.73
TDP1-216ENST00000556867 CCNT1O60563 726 aaKnown RBP25.83■■□□□ 1.73
TDP1-216ENST00000556867 CAND2O75155 1236 aa25.83■■□□□ 1.73
TDP1-216ENST00000556867 FGBP02675 491 aa25.83■■□□□ 1.73
TDP1-216ENST00000556867 INSRRP14616 1297 aa25.83■■□□□ 1.73
TDP1-216ENST00000556867 SWSAP1Q6NVH7 229 aa25.83■■□□□ 1.73
TDP1-216ENST00000556867 PDXDC2PQ6P474 469 aa25.83■■□□□ 1.73
TDP1-216ENST00000556867 HERVK_113Q902F9 699 aa25.83■■□□□ 1.73
TDP1-216ENST00000556867 LRCH3Q96II8 777 aa25.83■■□□□ 1.73
TDP1-216ENST00000556867 UNC45AQ9H3U1 944 aa25.83■■□□□ 1.73
TDP1-216ENST00000556867 MAFBQ9Y5Q3 323 aaPredicted RBP25.83■■□□□ 1.73
TDP1-216ENST00000556867 POTEB3A0JP26 581 aa25.82■■□□□ 1.72
TDP1-216ENST00000556867 SLC34A2O95436 690 aa25.82■■□□□ 1.72
TDP1-216ENST00000556867 SFNP31947 248 aa25.82■■□□□ 1.72
TDP1-216ENST00000556867 JAK3P52333 1124 aa25.82■■□□□ 1.72
TDP1-216ENST00000556867 MARCH8Q5T0T0 291 aa25.82■■□□□ 1.72
TDP1-216ENST00000556867 ZNF618Q5T7W0 954 aa25.82■■□□□ 1.72
TDP1-216ENST00000556867 POTEBQ6S5H4 581 aa25.82■■□□□ 1.72
TDP1-216ENST00000556867 B3GNT9Q6UX72 402 aa25.82■■□□□ 1.72
TDP1-216ENST00000556867 DEFB128Q7Z7B8 93 aa25.82■■□□□ 1.72
TDP1-216ENST00000556867 RDM1Q8NG50 284 aa25.82■■□□□ 1.72
TDP1-216ENST00000556867 ATP8B4Q8TF62 1192 aa25.82■■□□□ 1.72
TDP1-216ENST00000556867 FAM20AQ96MK3 541 aa25.82■■□□□ 1.72
TDP1-216ENST00000556867 DISC1Q9NRI5 854 aa25.82■■□□□ 1.72
TDP1-216ENST00000556867 TUBE1Q9UJT0 475 aa25.82■■□□□ 1.72
TDP1-216ENST00000556867 SAMM50Q9Y512 469 aa25.82■■□□□ 1.72
TDP1-216ENST00000556867 IGSF9BQ9UPX0 1349 aa25.82■■□□□ 1.72
TDP1-216ENST00000556867 TBX3O15119 743 aa25.81■■□□□ 1.72
TDP1-216ENST00000556867 THPOP40225 353 aa25.81■■□□□ 1.72
TDP1-216ENST00000556867 GPNMBQ14956 572 aa25.81■■□□□ 1.72
TDP1-216ENST00000556867 TAF2Q6P1X5 1199 aa25.81■■□□□ 1.72
TDP1-216ENST00000556867 MTIF3Q9H2K0 278 aaKnown RBP25.81■■□□□ 1.72
TDP1-216ENST00000556867 FOXP1Q9H334 677 aaPredicted RBP25.81■■□□□ 1.72
TDP1-216ENST00000556867 KIF3AQ9Y496 699 aa25.81■■□□□ 1.72
TDP1-216ENST00000556867 CHMP2AO43633 222 aa25.8■■□□□ 1.72
TDP1-216ENST00000556867 HBP1O60381 514 aa25.8■■□□□ 1.72
TDP1-216ENST00000556867 ATP4AP20648 1035 aa25.8■■□□□ 1.72
TDP1-216ENST00000556867 GPR153Q6NV75 609 aa25.8■■□□□ 1.72
TDP1-216ENST00000556867 RPAINQ86UA6 219 aa25.8■■□□□ 1.72
TDP1-216ENST00000556867 GABBR1Q9UBS5 961 aa25.8■■□□□ 1.72
TDP1-216ENST00000556867 SZT2Q5T011 3432 aa25.79■■□□□ 1.72
TDP1-216ENST00000556867 CXCL10P02778 98 aa25.79■■□□□ 1.72
TDP1-216ENST00000556867 IGBP1P78318 339 aa25.79■■□□□ 1.72
TDP1-216ENST00000556867 RUFY4Q6ZNE9 571 aa25.79■■□□□ 1.72
TDP1-216ENST00000556867 OTOP2Q7RTS6 562 aa25.79■■□□□ 1.72
TDP1-216ENST00000556867 POTEDQ86YR6 584 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms