RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 GPKOWQ92917 476 aaPredicted RBP eCLIP8.37□□□□□ -1.07
SCFD1-222ENST00000556768 ATP6V0A1Q93050 837 aa8.37□□□□□ -1.07
SCFD1-222ENST00000556768 GAS2L1Q99501 681 aaPredicted RBP8.37□□□□□ -1.07
SCFD1-222ENST00000556768 SDF4Q9BRK5 362 aa8.37□□□□□ -1.07
SCFD1-222ENST00000556768 PBX4Q9BYU1 374 aa8.37□□□□□ -1.07
SCFD1-222ENST00000556768 C6orf50Q9HD87 102 aa8.37□□□□□ -1.07
SCFD1-222ENST00000556768 ALPK3Q96L96 1907 aa8.37□□□□□ -1.07
SCFD1-222ENST00000556768 LAMA4Q16363 1823 aa8.37□□□□□ -1.07
SCFD1-222ENST00000556768 EMSYQ7Z589 1322 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 HAS3O00219 553 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 CPLX1O14810 134 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 EFCAB14O75071 495 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 BAIAP3O94812 1187 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 LGALS2P05162 132 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 FOSL2P15408 326 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 APOBRQ0VD83 1088 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 AP3B2Q13367 1082 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 UBE2SQ16763 222 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 UTP14CQ5TAP6 766 aaKnown RBP8.36□□□□□ -1.07
SCFD1-222ENST00000556768 WWC2Q6AWC2 1192 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 RUFY3Q7L099 469 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 LRRC8DQ7L1W4 858 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 TRIM22Q8IYM9 498 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 FBXL16Q8N461 479 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 PHOSPHO2Q8TCD6 241 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 BICD2Q8TD16 824 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 SEPT1Q8WYJ6 367 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 KCNB2Q92953 911 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 GUCD1Q96NT3 240 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 GPR20Q99678 358 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 C16orf70Q9BSU1 422 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 ZBED2Q9BTP6 218 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 AZI2Q9H6S1 392 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 CXXC1Q9P0U4 656 aaPredicted RBP8.36□□□□□ -1.07
SCFD1-222ENST00000556768 FRMPD3Q5JV73 1810 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 CKBP12277 381 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 SCG2P13521 617 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 CPA1P15085 419 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 TCF7P36402 384 aaPredicted RBP8.36□□□□□ -1.07
SCFD1-222ENST00000556768 THPOP40225 353 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 RBM25P49756 843 aaKnown RBP8.36□□□□□ -1.07
SCFD1-222ENST00000556768 COL9A3Q14050 684 aaPredicted RBP8.36□□□□□ -1.07
SCFD1-222ENST00000556768 IKBKEQ14164 716 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 PFKFB3Q16875 520 aaPredicted RBP8.36□□□□□ -1.07
SCFD1-222ENST00000556768 CEP55Q53EZ4 464 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 RSPH3Q86UC2 560 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 SLC9A7Q96T83 725 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 TTYH1Q9H313 450 aaPredicted RBP8.36□□□□□ -1.07
SCFD1-222ENST00000556768 SMARCAD1Q9H4L7 1026 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 JADE2Q9NQC1 790 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 ERAP1Q9NZ08 941 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 TCEAL9Q9UHQ7 104 aa8.36□□□□□ -1.07
SCFD1-222ENST00000556768 CHD9Q3L8U1 2897 aa8.35□□□□□ -1.07
SCFD1-222ENST00000556768 CNTNAP5Q8WYK1 1306 aa8.35□□□□□ -1.07
SCFD1-222ENST00000556768 NRCAMQ92823 1304 aa8.35□□□□□ -1.07
SCFD1-222ENST00000556768 DDX11L8A8MPP1 907 aa8.35□□□□□ -1.07
SCFD1-222ENST00000556768 GRXCR1A8MXD5 290 aa8.35□□□□□ -1.07
SCFD1-222ENST00000556768 RSPH10B2B2RC85 870 aa8.35□□□□□ -1.07
SCFD1-222ENST00000556768 RSPH10BP0C881 870 aa8.35□□□□□ -1.07
SCFD1-222ENST00000556768 SMIM10L2AP0DMW4 78 aa8.35□□□□□ -1.07
SCFD1-222ENST00000556768 SMIM10L2BP0DMW5 78 aa8.35□□□□□ -1.07
SCFD1-222ENST00000556768 ITGB5P18084 799 aa8.35□□□□□ -1.07
SCFD1-222ENST00000556768 RFX1P22670 979 aa8.35□□□□□ -1.07
SCFD1-222ENST00000556768 CDC27P30260 824 aa8.35□□□□□ -1.07
SCFD1-222ENST00000556768 REXO1Q8N1G1 1221 aaKnown RBP8.35□□□□□ -1.07
SCFD1-222ENST00000556768 CCDC148Q8NFR7 591 aa8.35□□□□□ -1.07
SCFD1-222ENST00000556768 MYLIPQ8WY64 445 aa8.35□□□□□ -1.07
SCFD1-222ENST00000556768 MXRA8Q9BRK3 442 aa8.35□□□□□ -1.07
SCFD1-222ENST00000556768 RNPEPQ9H4A4 650 aa8.35□□□□□ -1.07
SCFD1-222ENST00000556768 JPH1Q9HDC5 661 aaPredicted RBP8.35□□□□□ -1.07
SCFD1-222ENST00000556768 KCNH7Q9NS40 1196 aa8.35□□□□□ -1.07
SCFD1-222ENST00000556768 PCDHA11Q9Y5I1 949 aa8.35□□□□□ -1.07
SCFD1-222ENST00000556768 UBIAD1Q9Y5Z9 338 aa8.35□□□□□ -1.07
SCFD1-222ENST00000556768 MCM3APO60318 1980 aa8.34□□□□□ -1.07
SCFD1-222ENST00000556768 ABHD14A-ACY1A0A1B0GW23 586 aa8.34□□□□□ -1.07
SCFD1-222ENST00000556768 HAX1O00165 279 aa8.34□□□□□ -1.07
SCFD1-222ENST00000556768 STXBP3O00186 592 aa8.34□□□□□ -1.07
SCFD1-222ENST00000556768 PRPF3O43395 683 aaKnown RBP8.34□□□□□ -1.07
SCFD1-222ENST00000556768 GPR37L1O60883 481 aa8.34□□□□□ -1.07
SCFD1-222ENST00000556768 CAND2O75155 1236 aa8.34□□□□□ -1.07
SCFD1-222ENST00000556768 RPLP2P05387 115 aaKnown RBP8.34□□□□□ -1.07
SCFD1-222ENST00000556768 PBX2P40425 430 aa8.34□□□□□ -1.07
SCFD1-222ENST00000556768 RBL2Q08999 1139 aa8.34□□□□□ -1.07
SCFD1-222ENST00000556768 FUT2Q10981 343 aa8.34□□□□□ -1.07
SCFD1-222ENST00000556768 GRIN2CQ14957 1233 aa8.34□□□□□ -1.07
SCFD1-222ENST00000556768 TAF2Q6P1X5 1199 aa8.34□□□□□ -1.07
SCFD1-222ENST00000556768 CNKSR3Q6P9H4 555 aa8.34□□□□□ -1.07
SCFD1-222ENST00000556768 SERINC5Q86VE9 423 aa8.34□□□□□ -1.07
SCFD1-222ENST00000556768 MAFAQ8NHW3 353 aaPredicted RBP8.34□□□□□ -1.07
SCFD1-222ENST00000556768 RNF26Q9BY78 433 aaPredicted RBP8.34□□□□□ -1.07
SCFD1-222ENST00000556768 ANO3Q9BYT9 981 aa8.34□□□□□ -1.07
SCFD1-222ENST00000556768 TM6SF1Q9BZW5 370 aa8.34□□□□□ -1.07
SCFD1-222ENST00000556768 ZSWIM6Q9HCJ5 1215 aa8.34□□□□□ -1.07
SCFD1-222ENST00000556768 SETD4Q9NVD3 440 aa8.34□□□□□ -1.07
SCFD1-222ENST00000556768 PKD2L1Q9P0L9 805 aa8.34□□□□□ -1.07
SCFD1-222ENST00000556768 SLC9A2Q9UBY0 812 aa8.34□□□□□ -1.07
SCFD1-222ENST00000556768 XIRP2A4UGR9 3374 aa8.33□□□□□ -1.08
SCFD1-222ENST00000556768 TLL1O43897 1013 aa8.33□□□□□ -1.08
SCFD1-222ENST00000556768 ATP9AO75110 1047 aa8.33□□□□□ -1.08
SCFD1-222ENST00000556768 CDKL5O76039 1030 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms