RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 ARMC5Q96C12 935 aa6.82□□□□□ -1.32
TDP1-215ENST00000556498 SDCCAG3Q96C92 435 aa6.82□□□□□ -1.32
TDP1-215ENST00000556498 ZNF653Q96CK0 615 aa6.82□□□□□ -1.32
TDP1-215ENST00000556498 PGBD4Q96DM1 585 aa6.82□□□□□ -1.32
TDP1-215ENST00000556498 SLC39A13Q96H72 371 aa6.82□□□□□ -1.32
TDP1-215ENST00000556498 SAMD11Q96NU1 681 aa6.82□□□□□ -1.32
TDP1-215ENST00000556498 BRD9Q9H8M2 597 aa6.82□□□□□ -1.32
TDP1-215ENST00000556498 PARVBQ9HBI1 364 aa6.82□□□□□ -1.32
TDP1-215ENST00000556498 PICK1Q9NRD5 415 aa6.82□□□□□ -1.32
TDP1-215ENST00000556498 PPIP5K1Q6PFW1 1433 aa6.82□□□□□ -1.32
TDP1-215ENST00000556498 GOLGA6L7A0A1B0GV03 622 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 METTL12A8MUP2 240 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 IDH3BO43837 385 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 FOXD2O60548 495 aaPredicted RBP6.81□□□□□ -1.32
TDP1-215ENST00000556498 RGS9O75916 674 aaPredicted RBP6.81□□□□□ -1.32
TDP1-215ENST00000556498 EIF2S1P05198 315 aaKnown RBP6.81□□□□□ -1.32
TDP1-215ENST00000556498 USP17L7P0C7H9 530 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 PCP11498 1178 aaKnown RBP6.81□□□□□ -1.32
TDP1-215ENST00000556498 XRCC5P13010 732 aaKnown RBP6.81□□□□□ -1.32
TDP1-215ENST00000556498 NCAM1P13591 858 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 GSTT1P30711 240 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 PRKAR1BP31321 381 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 HPDP32754 393 aaPredicted RBP6.81□□□□□ -1.32
TDP1-215ENST00000556498 CENPAP49450 140 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 MCM2P49736 904 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 RUNX1T1Q06455 604 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 CBX3Q13185 183 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 NAA25Q14CX7 972 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 PLCB4Q15147 1175 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 KRT71Q3SY84 523 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 INO80DQ53TQ3 878 aaPredicted RBP6.81□□□□□ -1.32
TDP1-215ENST00000556498 SYCP2LQ5T4T6 812 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 CCDC183Q5T5S1 534 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 PPP4R4Q6NUP7 873 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 LYPD4Q6UWN0 246 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 CCDC13Q8IYE1 715 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 NKAIN3Q8N8D7 197 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 CEP112Q8N8E3 955 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 SMC1BQ8NDV3 1235 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 C3orf58Q8NDZ4 430 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 PPHLN1Q8NEY8 458 aaKnown RBP6.81□□□□□ -1.32
TDP1-215ENST00000556498 EXOC6Q8TAG9 804 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 CACTINQ8WUQ7 758 aaKnown RBP6.81□□□□□ -1.32
TDP1-215ENST00000556498 LMBR1Q8WVP7 490 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 ZKSCAN4Q969J2 545 aaPredicted RBP6.81□□□□□ -1.32
TDP1-215ENST00000556498 SH3KBP1Q96B97 665 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 CRELD1Q96HD1 420 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 BTBD6Q96KE9 485 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 RPGRIP1Q96KN7 1286 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 C16orf45Q96MC5 204 aaPredicted RBP6.81□□□□□ -1.32
TDP1-215ENST00000556498 SMC6Q96SB8 1091 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 CENPHQ9H3R5 247 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 FANCFQ9NPI8 374 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 ATXN10Q9UBB4 475 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 TTC7AQ9ULT0 858 aaPredicted RBP6.81□□□□□ -1.32
TDP1-215ENST00000556498 TTF2Q9UNY4 1162 aaKnown RBP6.81□□□□□ -1.32
TDP1-215ENST00000556498 CD2APQ9Y5K6 639 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 BZW2Q9Y6E2 419 aaKnown RBP6.81□□□□□ -1.32
TDP1-215ENST00000556498 USP31Q70CQ4 1352 aa6.81□□□□□ -1.32
TDP1-215ENST00000556498 MYPNQ86TC9 1320 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 FANCD2Q9BXW9 1451 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 A0A096LPE4 126 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 A0A1W2PPZ6 126 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 SHISA8B8ZZ34 492 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 PRRT4C9JH25 899 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 MCF2LO15068 1137 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 DAB1O75553 588 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 ARIH2O95376 493 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 PAHP00439 452 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 CELA2BP08218 269 aaPredicted RBP6.8□□□□□ -1.32
TDP1-215ENST00000556498 RHOXF2BP0C7M4 288 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 KRT10P13645 584 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 RAC2P15153 192 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 ITPKAP23677 461 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 CNGA1P29973 690 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 HOXD12P35452 270 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 INHBCP55103 352 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 FCGRTP55899 365 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 MRPS35P82673 323 aaKnown RBP6.8□□□□□ -1.32
TDP1-215ENST00000556498 PTPN12Q05209 780 aaKnown RBP6.8□□□□□ -1.32
TDP1-215ENST00000556498 ABCC8Q09428 1581 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 IFFO1Q0D2I5 559 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 SP140Q13342 867 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 BYSLQ13895 437 aaKnown RBP6.8□□□□□ -1.32
TDP1-215ENST00000556498 KCNB1Q14721 858 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 SPCS2Q15005 226 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 ANKRD1Q15327 319 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 SPRED3Q2MJR0 410 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 C15orf59Q2T9L4 293 aaPredicted RBP6.8□□□□□ -1.32
TDP1-215ENST00000556498 ANKRD39Q53RE8 183 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 VPS53Q5VIR6 699 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 NCAPH2Q6IBW4 605 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 TLDC1Q6P9B6 456 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 TUBA3EQ6PEY2 450 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 ADAMTSL4Q6UY14 1074 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 PPP1R21Q6ZMI0 780 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 ARHGEF18Q6ZSZ5 1173 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 TTLL7Q6ZT98 887 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 CCDC121Q6ZUS5 278 aa6.8□□□□□ -1.32
TDP1-215ENST00000556498 USP51Q70EK9 711 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms