RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 TAF11Q15544 211 aa9.36□□□□□ -0.91
MARK3-210ENST00000556463 IFIT1BQ5T764 474 aaKnown RBP9.36□□□□□ -0.91
MARK3-210ENST00000556463 FAM47EQ6ZV65 393 aa9.36□□□□□ -0.91
MARK3-210ENST00000556463 TRIM42Q8IWZ5 723 aa9.36□□□□□ -0.91
MARK3-210ENST00000556463 NOC4LQ9BVI4 516 aaKnown RBP9.36□□□□□ -0.91
MARK3-210ENST00000556463 TRPC6Q9Y210 931 aa9.36□□□□□ -0.91
MARK3-210ENST00000556463 GMNCA6NCL1 334 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 IRS4O14654 1257 aaPredicted RBP9.35□□□□□ -0.91
MARK3-210ENST00000556463 TLR2O60603 784 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 HEXIM1O94992 359 aaKnown RBP9.35□□□□□ -0.91
MARK3-210ENST00000556463 PAFAH1B1P43034 410 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 TRADDQ15628 312 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 KCTD19Q17RG1 926 aaPredicted RBP9.35□□□□□ -0.91
MARK3-210ENST00000556463 C11orf91Q3C1V1 193 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 TYW1BQ6NUM6 668 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 ZNF467Q7Z7K2 595 aaPredicted RBP9.35□□□□□ -0.91
MARK3-210ENST00000556463 ZCRB1Q8TBF4 217 aaKnown RBP9.35□□□□□ -0.91
MARK3-210ENST00000556463 OSBPL1AQ9BXW6 950 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 EPB41L5Q9HCM4 733 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 PCDHA4Q9UN74 947 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 DCCP43146 1447 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 PPIP5K2O43314 1243 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 NOL4O94818 638 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 RAB27AP51159 221 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 SESN3P58005 492 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 KCNMA1Q12791 1236 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 BIRC3Q13489 604 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 QPCTQ16769 361 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 AGBL2Q5U5Z8 902 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 RCSD1Q6JBY9 416 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 LRRC55Q6ZSA7 311 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 C2CD5Q86YS7 1000 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 MAB21L3Q8N8X9 362 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 ZNF384Q8TF68 577 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 ANKS1AQ92625 1134 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 AK8Q96MA6 479 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 NOX5Q96PH1 765 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 TXLNGYQ9BZA5 131 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 PHACTR1Q9C0D0 580 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 NDST4Q9H3R1 872 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 KCNMB3Q9NPA1 279 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 LEMD3Q9Y2U8 911 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 LRRC53A6NM62 1247 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 PP2D1A8MPX8 630 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 CALML3P27482 149 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 ZNF844Q08AG5 666 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 GRIK3Q13003 919 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 ACBD5Q5T8D3 534 aaPredicted RBP9.35□□□□□ -0.91
MARK3-210ENST00000556463 CCDC84Q86UT8 332 aaPredicted RBP9.35□□□□□ -0.91
MARK3-210ENST00000556463 ZNF34Q8IZ26 560 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 BLIDQ8IZY5 108 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 CCDC63Q8NA47 563 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 RASSF8Q8NHQ8 419 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 CENPTQ96BT3 561 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 MMTAG2Q9BU76 263 aaKnown RBP9.35□□□□□ -0.91
MARK3-210ENST00000556463 ATP6V0A4Q9HBG4 840 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 LMCD1Q9NZU5 365 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 NENFQ9UMX5 172 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 PCDHA6Q9UN73 950 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 PCDHA8Q9Y5H6 950 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 CCDC88AQ3V6T2 1871 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 MAST2Q6P0Q8 1798 aa9.35□□□□□ -0.91
MARK3-210ENST00000556463 COL5A2P05997 1499 aaPredicted RBP9.34□□□□□ -0.91
MARK3-210ENST00000556463 HSD17B3P37058 310 aa9.34□□□□□ -0.91
MARK3-210ENST00000556463 GUCY2DQ02846 1103 aa9.34□□□□□ -0.91
MARK3-210ENST00000556463 SLC35G1Q2M3R5 365 aa9.34□□□□□ -0.91
MARK3-210ENST00000556463 SPDYCQ5MJ68 293 aa9.34□□□□□ -0.91
MARK3-210ENST00000556463 DPY19L2P1Q6NXN4 242 aa9.34□□□□□ -0.91
MARK3-210ENST00000556463 USP38Q8NB14 1042 aa9.34□□□□□ -0.91
MARK3-210ENST00000556463 PHOX2BQ99453 314 aa9.34□□□□□ -0.91
MARK3-210ENST00000556463 TSPYL2Q9H2G4 693 aaPredicted RBP9.34□□□□□ -0.91
MARK3-210ENST00000556463 TAF1DQ9H5J8 278 aaPredicted RBP9.34□□□□□ -0.91
MARK3-210ENST00000556463 NOD2Q9HC29 1040 aa9.34□□□□□ -0.91
MARK3-210ENST00000556463 BSDC1Q9NW68 430 aaPredicted RBP9.34□□□□□ -0.91
MARK3-210ENST00000556463 PLAAQ9Y263 795 aa9.34□□□□□ -0.91
MARK3-210ENST00000556463 USTQ9Y2C2 406 aa9.34□□□□□ -0.91
MARK3-210ENST00000556463 CASZ1Q86V15 1759 aa9.34□□□□□ -0.91
MARK3-210ENST00000556463 RAD51CO43502 376 aa9.34□□□□□ -0.91
MARK3-210ENST00000556463 PPFIA2O75334 1257 aa9.34□□□□□ -0.91
MARK3-210ENST00000556463 FCER1AP12319 257 aa9.34□□□□□ -0.91
MARK3-210ENST00000556463 SLC1A4P43007 532 aa9.34□□□□□ -0.91
MARK3-210ENST00000556463 MAGEA1P43355 309 aa9.34□□□□□ -0.91
MARK3-210ENST00000556463 ERVK-9P63128 1117 aa9.34□□□□□ -0.91
MARK3-210ENST00000556463 MAN2A1Q16706 1144 aa9.34□□□□□ -0.91
MARK3-210ENST00000556463 DTHD1Q6ZMT9 781 aa9.34□□□□□ -0.91
MARK3-210ENST00000556463 KIF6Q6ZMV9 814 aa9.34□□□□□ -0.91
MARK3-210ENST00000556463 ARHGAP22Q7Z5H3 698 aa9.34□□□□□ -0.91
MARK3-210ENST00000556463 CNOT8Q9UFF9 292 aaKnown RBP9.34□□□□□ -0.91
MARK3-210ENST00000556463 DYTNA2CJ06 578 aa9.34□□□□□ -0.91
MARK3-210ENST00000556463 ERVV-1B6SEH8 477 aa9.34□□□□□ -0.91
MARK3-210ENST00000556463 F8W031 263 aaPredicted RBP9.34□□□□□ -0.91
MARK3-210ENST00000556463 SCTRP47872 440 aa9.34□□□□□ -0.91
MARK3-210ENST00000556463 GFPT1Q06210 699 aaPredicted RBP9.34□□□□□ -0.91
MARK3-210ENST00000556463 CUL1Q13616 776 aa9.34□□□□□ -0.91
MARK3-210ENST00000556463 CEP128Q6ZU80 1094 aa9.34□□□□□ -0.91
MARK3-210ENST00000556463 BZW1Q7L1Q6 419 aaKnown RBP9.34□□□□□ -0.91
MARK3-210ENST00000556463 SPATA21Q7Z572 469 aa9.34□□□□□ -0.91
MARK3-210ENST00000556463 ARFGAP2Q8N6H7 521 aa9.34□□□□□ -0.91
MARK3-210ENST00000556463 ACTRT1Q8TDG2 376 aa9.34□□□□□ -0.91
MARK3-210ENST00000556463 SDR42E1Q8WUS8 393 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms