RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 DNAI2Q9GZS0 605 aa16.3■□□□□ 0.2
ARHGEF40-207ENST00000556399 KANSL2Q9H9L4 492 aa16.3■□□□□ 0.2
ARHGEF40-207ENST00000556399 THRAP3Q9Y2W1 955 aaKnown RBP16.3■□□□□ 0.2
ARHGEF40-207ENST00000556399 NOC2LQ9Y3T9 749 aaKnown RBP16.3■□□□□ 0.2
ARHGEF40-207ENST00000556399 TDP2O95551 362 aa16.3■□□□□ 0.2
ARHGEF40-207ENST00000556399 NT5DC1Q5TFE4 455 aa16.3■□□□□ 0.2
ARHGEF40-207ENST00000556399 OTUD6AQ7L8S5 288 aa16.3■□□□□ 0.2
ARHGEF40-207ENST00000556399 CCT8L2Q96SF2 557 aa16.3■□□□□ 0.2
ARHGEF40-207ENST00000556399 TMEM60Q9H2L4 133 aa16.3■□□□□ 0.2
ARHGEF40-207ENST00000556399 DUSP10Q9Y6W6 482 aa16.29■□□□□ 0.2
ARHGEF40-207ENST00000556399 SSU72P8A0A1W2PR75 194 aa16.29■□□□□ 0.2
ARHGEF40-207ENST00000556399 ORC2Q13416 577 aaPredicted RBP16.29■□□□□ 0.2
ARHGEF40-207ENST00000556399 CELF1Q92879 486 aaKnown RBP16.29■□□□□ 0.2
ARHGEF40-207ENST00000556399 FAM84BQ96KN1 310 aaPredicted RBP16.29■□□□□ 0.2
ARHGEF40-207ENST00000556399 KLC4Q9NSK0 619 aa16.29■□□□□ 0.2
ARHGEF40-207ENST00000556399 SERPINB13Q9UIV8 391 aa16.29■□□□□ 0.2
ARHGEF40-207ENST00000556399 COL15A1P39059 1388 aa16.29■□□□□ 0.2
ARHGEF40-207ENST00000556399 A0A1W2PQJ5 194 aa16.29■□□□□ 0.2
ARHGEF40-207ENST00000556399 TNNI1P19237 187 aa16.29■□□□□ 0.2
ARHGEF40-207ENST00000556399 CARSP49589 748 aaKnown RBP16.29■□□□□ 0.2
ARHGEF40-207ENST00000556399 KCNQ4P56696 695 aa16.29■□□□□ 0.2
ARHGEF40-207ENST00000556399 STRN3Q13033 797 aa16.29■□□□□ 0.2
ARHGEF40-207ENST00000556399 BHMT2Q9H2M3 363 aa16.29■□□□□ 0.2
ARHGEF40-207ENST00000556399 UBE2TQ9NPD8 197 aaPredicted RBP16.29■□□□□ 0.2
ARHGEF40-207ENST00000556399 TFRCP02786 760 aaKnown RBP16.29■□□□□ 0.2
ARHGEF40-207ENST00000556399 POLR2MP0CAP2 368 aa16.29■□□□□ 0.2
ARHGEF40-207ENST00000556399 PAPD7Q5XG87 772 aaKnown RBP16.29■□□□□ 0.2
ARHGEF40-207ENST00000556399 BBOF1Q8ND07 529 aa16.29■□□□□ 0.2
ARHGEF40-207ENST00000556399 LRRC8CQ8TDW0 803 aa16.29■□□□□ 0.2
ARHGEF40-207ENST00000556399 SPZ1Q9BXG8 430 aa16.29■□□□□ 0.2
ARHGEF40-207ENST00000556399 LSP1P33241 339 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 FAM102BQ5T8I3 360 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 CPXCR1Q8N123 301 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 GDAP1Q8TB36 358 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 TBK1Q9UHD2 729 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 POC1B-GALNT4F8VUJ3 575 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 LUC7L3O95232 432 aaKnown RBP16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 PLEKP08567 350 aaPredicted RBP16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 WDR78Q5VTH9 848 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 ARHGEF18Q6ZSZ5 1173 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 SFR1Q86XK3 245 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 CCDC89Q8N998 374 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 EHD2Q9NZN4 543 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 AMACRQ9UHK6 382 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 POTEB3A0JP26 581 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 POTECB2RU33 542 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 DAPK3O43293 454 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 ATF7P17544 494 aaPredicted RBP16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 SESN3P58005 492 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 HERVK_113P62684 666 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 POTEBQ6S5H4 581 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 TEKT3Q9BXF9 490 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 ANO3Q9BYT9 981 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 LACRTQ9GZZ8 138 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 RAB20Q9NX57 234 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 MFAP3P55082 362 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 TROAPQ12815 778 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 SLC18A3Q16572 532 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 NUGGCQ68CJ6 796 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 NSUN4Q96CB9 384 aaKnown RBP16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 PCIF1Q9H4Z3 704 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 INTS13Q9NVM9 706 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 TXNDC16Q9P2K2 825 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 DNAJC12Q9UKB3 198 aa16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 DIS3Q9Y2L1 958 aaKnown RBP16.28■□□□□ 0.2
ARHGEF40-207ENST00000556399 SFI1A8K8P3 1242 aa16.27■□□□□ 0.2
ARHGEF40-207ENST00000556399 MYO1FO00160 1098 aa16.27■□□□□ 0.2
ARHGEF40-207ENST00000556399 SART1O43290 800 aaKnown RBP16.27■□□□□ 0.2
ARHGEF40-207ENST00000556399 ACSL3O95573 720 aa16.27■□□□□ 0.2
ARHGEF40-207ENST00000556399 DLATP10515 647 aaKnown RBP16.27■□□□□ 0.2
ARHGEF40-207ENST00000556399 MAN1A1P33908 653 aa16.27■□□□□ 0.2
ARHGEF40-207ENST00000556399 CEP95Q96GE4 821 aa16.27■□□□□ 0.2
ARHGEF40-207ENST00000556399 PARP9Q8IXQ6 854 aa16.27■□□□□ 0.2
ARHGEF40-207ENST00000556399 CCDC17Q96LX7 622 aa16.27■□□□□ 0.2
ARHGEF40-207ENST00000556399 ERGIC2Q96RQ1 377 aa16.27■□□□□ 0.2
ARHGEF40-207ENST00000556399 PARVGQ9HBI0 331 aa16.27■□□□□ 0.2
ARHGEF40-207ENST00000556399 C1orf112Q9NSG2 853 aa16.27■□□□□ 0.2
ARHGEF40-207ENST00000556399 ZNF148Q9UQR1 794 aa16.27■□□□□ 0.2
ARHGEF40-207ENST00000556399 NR3C1P04150 777 aa16.27■□□□□ 0.19
ARHGEF40-207ENST00000556399 NBPF9Q3BBW0 867 aa16.27■□□□□ 0.19
ARHGEF40-207ENST00000556399 CYP4F22Q6NT55 531 aa16.27■□□□□ 0.19
ARHGEF40-207ENST00000556399 RHOT2Q8IXI1 618 aa16.27■□□□□ 0.19
ARHGEF40-207ENST00000556399 PAF1Q8N7H5 531 aa16.27■□□□□ 0.19
ARHGEF40-207ENST00000556399 VTI1AQ96AJ9 217 aa16.27■□□□□ 0.19
ARHGEF40-207ENST00000556399 SLITRK6Q9H5Y7 841 aa16.27■□□□□ 0.19
ARHGEF40-207ENST00000556399 ANAPC5Q9UJX4 755 aa16.27■□□□□ 0.19
ARHGEF40-207ENST00000556399 I3L4J1 428 aa16.27■□□□□ 0.19
ARHGEF40-207ENST00000556399 NDC80O14777 642 aa16.27■□□□□ 0.19
ARHGEF40-207ENST00000556399 PMS2P54278 862 aa16.27■□□□□ 0.19
ARHGEF40-207ENST00000556399 GPR101Q96P66 508 aaPredicted RBP16.27■□□□□ 0.19
ARHGEF40-207ENST00000556399 AZI2Q9H6S1 392 aa16.27■□□□□ 0.19
ARHGEF40-207ENST00000556399 TMEM51Q9NW97 253 aa16.27■□□□□ 0.19
ARHGEF40-207ENST00000556399 MAPK4P31152 587 aa16.26■□□□□ 0.19
ARHGEF40-207ENST00000556399 UBXN2AP68543 259 aa16.26■□□□□ 0.19
ARHGEF40-207ENST00000556399 ZNF211Q13398 564 aaPredicted RBP16.26■□□□□ 0.19
ARHGEF40-207ENST00000556399 TRIP13Q15645 432 aaPredicted RBP16.26■□□□□ 0.19
ARHGEF40-207ENST00000556399 ANKRD35Q8N283 1001 aa16.26■□□□□ 0.19
ARHGEF40-207ENST00000556399 TNS3Q68CZ2 1445 aa16.26■□□□□ 0.19
ARHGEF40-207ENST00000556399 PODXLO00592 558 aa16.26■□□□□ 0.19
ARHGEF40-207ENST00000556399 MAP2K7O14733 419 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms