RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 CYP26A1O43174 497 aa5.97□□□□□ -1.45
ATXN3-239ENST00000556315 GLRX3O76003 335 aaKnown RBP5.97□□□□□ -1.45
ATXN3-239ENST00000556315 MAP4K4O95819 1239 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-239ENST00000556315 CTSBP07858 339 aa5.97□□□□□ -1.45
ATXN3-239ENST00000556315 GSTT1P30711 240 aa5.97□□□□□ -1.45
ATXN3-239ENST00000556315 PLA2G5P39877 138 aa5.97□□□□□ -1.45
ATXN3-239ENST00000556315 CAP2P40123 477 aa5.97□□□□□ -1.45
ATXN3-239ENST00000556315 GRIA4P48058 902 aa5.97□□□□□ -1.45
ATXN3-239ENST00000556315 BACE1P56817 501 aa5.97□□□□□ -1.45
ATXN3-239ENST00000556315 RTP1P59025 263 aa5.97□□□□□ -1.45
ATXN3-239ENST00000556315 HERVK_113P62684 666 aa5.97□□□□□ -1.45
ATXN3-239ENST00000556315 PICALMQ13492 652 aa5.97□□□□□ -1.45
ATXN3-239ENST00000556315 C9orf50Q5SZB4 431 aa5.97□□□□□ -1.45
ATXN3-239ENST00000556315 SPTY2D1Q68D10 685 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-239ENST00000556315 NXPE4Q6UWF7 544 aa5.97□□□□□ -1.45
ATXN3-239ENST00000556315 GPR142Q7Z601 462 aa5.97□□□□□ -1.45
ATXN3-239ENST00000556315 PLEKHH3Q7Z736 793 aa5.97□□□□□ -1.45
ATXN3-239ENST00000556315 WDR63Q8IWG1 891 aa5.97□□□□□ -1.45
ATXN3-239ENST00000556315 ARRDC4Q8NCT1 418 aa5.97□□□□□ -1.45
ATXN3-239ENST00000556315 KLHDC4Q8TBB5 520 aa5.97□□□□□ -1.45
ATXN3-239ENST00000556315 LPAR1Q92633 364 aa5.97□□□□□ -1.45
ATXN3-239ENST00000556315 FBXL18Q96ME1 805 aa5.97□□□□□ -1.45
ATXN3-239ENST00000556315 TBC1D32Q96NH3 1257 aa5.97□□□□□ -1.45
ATXN3-239ENST00000556315 WDR18Q9BV38 432 aa5.97□□□□□ -1.45
ATXN3-239ENST00000556315 GSX1Q9H4S2 264 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-239ENST00000556315 PRKRIP1Q9H875 184 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-239ENST00000556315 TXNRD2Q9NNW7 524 aa5.97□□□□□ -1.45
ATXN3-239ENST00000556315 DDX4Q9NQI0 724 aaKnown RBP5.97□□□□□ -1.45
ATXN3-239ENST00000556315 TMOD4Q9NZQ9 345 aa5.97□□□□□ -1.45
ATXN3-239ENST00000556315 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-239ENST00000556315 RBPJLQ9UBG7 517 aa5.97□□□□□ -1.45
ATXN3-239ENST00000556315 ACTL7BQ9Y614 415 aa5.97□□□□□ -1.45
ATXN3-239ENST00000556315 FANCIQ9NVI1 1328 aa5.97□□□□□ -1.45
ATXN3-239ENST00000556315 OTOFQ9HC10 1997 aa5.97□□□□□ -1.45
ATXN3-239ENST00000556315 GPR75-ASB3A0A0A6YYF3 556 aa5.96□□□□□ -1.46
ATXN3-239ENST00000556315 TMEM238LA0A1B0GVL6 79 aa5.96□□□□□ -1.46
ATXN3-239ENST00000556315 CYP11A1P05108 521 aa5.96□□□□□ -1.46
ATXN3-239ENST00000556315 LDHCP07864 332 aa5.96□□□□□ -1.46
ATXN3-239ENST00000556315 MAOBP27338 520 aa5.96□□□□□ -1.46
ATXN3-239ENST00000556315 BTDP43251 543 aa5.96□□□□□ -1.46
ATXN3-239ENST00000556315 RBM25P49756 843 aaKnown RBP5.96□□□□□ -1.46
ATXN3-239ENST00000556315 ERVK-24P63145 666 aa5.96□□□□□ -1.46
ATXN3-239ENST00000556315 CCL14Q16627 93 aa5.96□□□□□ -1.46
ATXN3-239ENST00000556315 SPRED3Q2MJR0 410 aa5.96□□□□□ -1.46
ATXN3-239ENST00000556315 SLC39A5Q6ZMH5 540 aa5.96□□□□□ -1.46
ATXN3-239ENST00000556315 DTHD1Q6ZMT9 781 aa5.96□□□□□ -1.46
ATXN3-239ENST00000556315 DZIP1Q86YF9 867 aaKnown RBP5.96□□□□□ -1.46
ATXN3-239ENST00000556315 GLIS3Q8NEA6 775 aa5.96□□□□□ -1.46
ATXN3-239ENST00000556315 ATXN2LQ8WWM7 1075 aaKnown RBP5.96□□□□□ -1.46
ATXN3-239ENST00000556315 BADQ92934 168 aa5.96□□□□□ -1.46
ATXN3-239ENST00000556315 MRRFQ96E11 262 aaKnown RBP5.96□□□□□ -1.46
ATXN3-239ENST00000556315 APBA2Q99767 749 aa5.96□□□□□ -1.46
ATXN3-239ENST00000556315 OSBPL7Q9BZF2 842 aa5.96□□□□□ -1.46
ATXN3-239ENST00000556315 CWC22Q9HCG8 908 aaKnown RBP5.96□□□□□ -1.46
ATXN3-239ENST00000556315 ABCB6Q9NP58 842 aa5.96□□□□□ -1.46
ATXN3-239ENST00000556315 GINM1Q9NU53 330 aa5.96□□□□□ -1.46
ATXN3-239ENST00000556315 VTI1BQ9UEU0 232 aa5.96□□□□□ -1.46
ATXN3-239ENST00000556315 ABCF2Q9UG63 623 aa5.96□□□□□ -1.46
ATXN3-239ENST00000556315 DDX20Q9UHI6 824 aaKnown RBP5.96□□□□□ -1.46
ATXN3-239ENST00000556315 HERC5Q9UII4 1024 aaKnown RBP5.96□□□□□ -1.46
ATXN3-239ENST00000556315 ATP11BQ9Y2G3 1177 aa5.96□□□□□ -1.46
ATXN3-239ENST00000556315 COL2A1P02458 1487 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-239ENST00000556315 ECM29Q5VYK3 1845 aa5.95□□□□□ -1.46
ATXN3-239ENST00000556315 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-239ENST00000556315 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-239ENST00000556315 SLC15A5A6NIM6 579 aa5.95□□□□□ -1.46
ATXN3-239ENST00000556315 FAM170BA6NMN3 283 aa5.95□□□□□ -1.46
ATXN3-239ENST00000556315 PEX10O60683 326 aa5.95□□□□□ -1.46
ATXN3-239ENST00000556315 ASNSP08243 561 aa5.95□□□□□ -1.46
ATXN3-239ENST00000556315 NFICP08651 508 aa5.95□□□□□ -1.46
ATXN3-239ENST00000556315 ITPKAP23677 461 aa5.95□□□□□ -1.46
ATXN3-239ENST00000556315 VAMP1P23763 118 aa5.95□□□□□ -1.46
ATXN3-239ENST00000556315 CNGA1P29973 690 aa5.95□□□□□ -1.46
ATXN3-239ENST00000556315 RFX5P48382 616 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-239ENST00000556315 RHBDL3P58872 404 aa5.95□□□□□ -1.46
ATXN3-239ENST00000556315 CCNA1P78396 465 aa5.95□□□□□ -1.46
ATXN3-239ENST00000556315 MRPL58Q14197 206 aaKnown RBP5.95□□□□□ -1.46
ATXN3-239ENST00000556315 MAP7Q14244 749 aa5.95□□□□□ -1.46
ATXN3-239ENST00000556315 RRP1BQ14684 758 aaKnown RBP5.95□□□□□ -1.46
ATXN3-239ENST00000556315 POU4F3Q15319 338 aa5.95□□□□□ -1.46
ATXN3-239ENST00000556315 ATP2B3Q16720 1220 aa5.95□□□□□ -1.46
ATXN3-239ENST00000556315 HP1BP3Q5SSJ5 553 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-239ENST00000556315 SEZ6L2Q6UXD5 910 aa5.95□□□□□ -1.46
ATXN3-239ENST00000556315 ATG9AQ7Z3C6 839 aa5.95□□□□□ -1.46
ATXN3-239ENST00000556315 FOXP4Q8IVH2 680 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-239ENST00000556315 TRIM56Q9BRZ2 755 aaKnown RBP5.95□□□□□ -1.46
ATXN3-239ENST00000556315 USP44Q9H0E7 712 aa5.95□□□□□ -1.46
ATXN3-239ENST00000556315 PORCNQ9H237 461 aa5.95□□□□□ -1.46
ATXN3-239ENST00000556315 SEMA6CQ9H3T2 930 aa5.95□□□□□ -1.46
ATXN3-239ENST00000556315 ACSS3Q9H6R3 686 aa5.95□□□□□ -1.46
ATXN3-239ENST00000556315 PRDM5Q9NQX1 630 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-239ENST00000556315 RNF19AQ9NV58 838 aa5.95□□□□□ -1.46
ATXN3-239ENST00000556315 PI4KBQ9UBF8 816 aa5.95□□□□□ -1.46
ATXN3-239ENST00000556315 RAPGEFL1Q9UHV5 662 aa5.95□□□□□ -1.46
ATXN3-239ENST00000556315 RABGAP1Q9Y3P9 1069 aa5.95□□□□□ -1.46
ATXN3-239ENST00000556315 TACC3Q9Y6A5 838 aa5.95□□□□□ -1.46
ATXN3-239ENST00000556315 ARAP2Q8WZ64 1704 aa5.94□□□□□ -1.46
ATXN3-239ENST00000556315 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-239ENST00000556315 CIAO1O76071 339 aa5.94□□□□□ -1.46
ATXN3-239ENST00000556315 HOXC6P09630 235 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms