RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 PCDH18Q9HCL0 1135 aa4.45□□□□□ -1.7
EFCAB11-210ENST00000556078 PPP4R1LQ9P1A2 415 aa4.45□□□□□ -1.7
EFCAB11-210ENST00000556078 FBXL21Q9UKT6 434 aa4.45□□□□□ -1.7
EFCAB11-210ENST00000556078 CD2APQ9Y5K6 639 aa4.45□□□□□ -1.7
EFCAB11-210ENST00000556078 BCL9O00512 1426 aa4.45□□□□□ -1.7
EFCAB11-210ENST00000556078 PRUNE2Q8WUY3 3088 aa4.44□□□□□ -1.7
EFCAB11-210ENST00000556078 COL5A2P05997 1499 aaPredicted RBP4.44□□□□□ -1.7
EFCAB11-210ENST00000556078 UBR3Q6ZT12 1888 aa4.44□□□□□ -1.7
EFCAB11-210ENST00000556078 LAMTOR5O43504 91 aa4.44□□□□□ -1.7
EFCAB11-210ENST00000556078 THBS2P35442 1172 aa4.44□□□□□ -1.7
EFCAB11-210ENST00000556078 INHBEP58166 350 aa4.44□□□□□ -1.7
EFCAB11-210ENST00000556078 SMAD4Q13485 552 aaKnown RBP4.44□□□□□ -1.7
EFCAB11-210ENST00000556078 TMEM192Q8IY95 271 aa4.44□□□□□ -1.7
EFCAB11-210ENST00000556078 FBXO27Q8NI29 283 aa4.44□□□□□ -1.7
EFCAB11-210ENST00000556078 ATG4CQ96DT6 458 aa4.44□□□□□ -1.7
EFCAB11-210ENST00000556078 PEX11GQ96HA9 241 aa4.44□□□□□ -1.7
EFCAB11-210ENST00000556078 DUSP9Q99956 384 aaKnown RBP4.44□□□□□ -1.7
EFCAB11-210ENST00000556078 LRRC3Q9BY71 257 aa4.44□□□□□ -1.7
EFCAB11-210ENST00000556078 C5P01031 1676 aa4.44□□□□□ -1.7
EFCAB11-210ENST00000556078 KIF1BO60333 1816 aa4.44□□□□□ -1.7
EFCAB11-210ENST00000556078 LAMA2P24043 3122 aaKnown RBP4.43□□□□□ -1.7
EFCAB11-210ENST00000556078 HTTP42858 3142 aa4.43□□□□□ -1.7
EFCAB11-210ENST00000556078 F6X3S4 739 aa4.43□□□□□ -1.7
EFCAB11-210ENST00000556078 CYP2C8P10632 490 aa4.43□□□□□ -1.7
EFCAB11-210ENST00000556078 GARTP22102 1010 aa4.43□□□□□ -1.7
EFCAB11-210ENST00000556078 LMO1P25800 156 aa4.43□□□□□ -1.7
EFCAB11-210ENST00000556078 L1CAMP32004 1257 aa4.43□□□□□ -1.7
EFCAB11-210ENST00000556078 PWP1Q13610 501 aa4.43□□□□□ -1.7
EFCAB11-210ENST00000556078 FHL2Q14192 279 aa4.43□□□□□ -1.7
EFCAB11-210ENST00000556078 CWF19L2Q2TBE0 894 aaKnown RBP4.43□□□□□ -1.7
EFCAB11-210ENST00000556078 SNAP47Q5SQN1 464 aa4.43□□□□□ -1.7
EFCAB11-210ENST00000556078 CWF19L1Q69YN2 538 aaKnown RBP4.43□□□□□ -1.7
EFCAB11-210ENST00000556078 NLRC3Q7RTR2 1065 aa4.43□□□□□ -1.7
EFCAB11-210ENST00000556078 USP48Q86UV5 1035 aa4.43□□□□□ -1.7
EFCAB11-210ENST00000556078 CABP7Q86V35 215 aa4.43□□□□□ -1.7
EFCAB11-210ENST00000556078 RELL1Q8IUW5 271 aa4.43□□□□□ -1.7
EFCAB11-210ENST00000556078 GOLM1Q8NBJ4 401 aa4.43□□□□□ -1.7
EFCAB11-210ENST00000556078 NETO2Q8NC67 525 aa4.43□□□□□ -1.7
EFCAB11-210ENST00000556078 GORASP1Q9BQQ3 440 aa4.43□□□□□ -1.7
EFCAB11-210ENST00000556078 C11orf84Q9BUA3 381 aaPredicted RBP4.43□□□□□ -1.7
EFCAB11-210ENST00000556078 DSCC1Q9BVC3 393 aa4.43□□□□□ -1.7
EFCAB11-210ENST00000556078 SEMA4AQ9H3S1 761 aa4.43□□□□□ -1.7
EFCAB11-210ENST00000556078 BCAS3Q9H6U6 928 aa4.43□□□□□ -1.7
EFCAB11-210ENST00000556078 EHMT1Q9H9B1 1298 aa4.43□□□□□ -1.7
EFCAB11-210ENST00000556078 RNF19AQ9NV58 838 aa4.43□□□□□ -1.7
EFCAB11-210ENST00000556078 NUDT5Q9UKK9 219 aa4.43□□□□□ -1.7
EFCAB11-210ENST00000556078 TESMINQ9Y4I5 508 aa4.43□□□□□ -1.7
EFCAB11-210ENST00000556078 PCDHB14Q9Y5E9 798 aa4.43□□□□□ -1.7
EFCAB11-210ENST00000556078 LAMA3Q16787 3333 aa4.43□□□□□ -1.7
EFCAB11-210ENST00000556078 C9orf118A6NHY6 69 aa4.42□□□□□ -1.7
EFCAB11-210ENST00000556078 TBC1D8O95759 1140 aa4.42□□□□□ -1.7
EFCAB11-210ENST00000556078 GBP2P32456 591 aaPredicted RBP4.42□□□□□ -1.7
EFCAB11-210ENST00000556078 NOP2P46087 812 aaKnown RBP4.42□□□□□ -1.7
EFCAB11-210ENST00000556078 SELENOPP49908 381 aa4.42□□□□□ -1.7
EFCAB11-210ENST00000556078 ATXN1P54253 815 aaKnown RBP4.42□□□□□ -1.7
EFCAB11-210ENST00000556078 EVA1CP58658 441 aa4.42□□□□□ -1.7
EFCAB11-210ENST00000556078 FAM160A1Q05DH4 1040 aa4.42□□□□□ -1.7
EFCAB11-210ENST00000556078 DDB1Q16531 1140 aa4.42□□□□□ -1.7
EFCAB11-210ENST00000556078 PLEKHH3Q7Z736 793 aa4.42□□□□□ -1.7
EFCAB11-210ENST00000556078 KYQ8NBH2 561 aa4.42□□□□□ -1.7
EFCAB11-210ENST00000556078 TXNDC5Q8NBS9 432 aaKnown RBP4.42□□□□□ -1.7
EFCAB11-210ENST00000556078 DOT1LQ8TEK3 1739 aa4.42□□□□□ -1.7
EFCAB11-210ENST00000556078 DDX11Q96FC9 970 aa4.42□□□□□ -1.7
EFCAB11-210ENST00000556078 LCORQ96JN0 433 aaPredicted RBP4.42□□□□□ -1.7
EFCAB11-210ENST00000556078 SLC6A18Q96N87 628 aa4.42□□□□□ -1.7
EFCAB11-210ENST00000556078 PTCHD1Q96NR3 888 aa4.42□□□□□ -1.7
EFCAB11-210ENST00000556078 DICER1Q9UPY3 1922 aaKnown RBP4.42□□□□□ -1.7
EFCAB11-210ENST00000556078 SCN11AQ9UI33 1791 aa4.41□□□□□ -1.7
EFCAB11-210ENST00000556078 NPEPPSL1A6NEC2 478 aa4.41□□□□□ -1.7
EFCAB11-210ENST00000556078 GPR42O15529 346 aa4.41□□□□□ -1.7
EFCAB11-210ENST00000556078 B4GALT3O60512 393 aa4.41□□□□□ -1.7
EFCAB11-210ENST00000556078 C8BP07358 591 aa4.41□□□□□ -1.7
EFCAB11-210ENST00000556078 ACRP10323 421 aa4.41□□□□□ -1.7
EFCAB11-210ENST00000556078 PRR31Q5SQ13 230 aa4.41□□□□□ -1.7
EFCAB11-210ENST00000556078 CIR1Q86X95 450 aaPredicted RBP4.41□□□□□ -1.7
EFCAB11-210ENST00000556078 C7orf61Q8IZ16 206 aa4.41□□□□□ -1.7
EFCAB11-210ENST00000556078 TTLL6Q8N841 843 aa4.41□□□□□ -1.7
EFCAB11-210ENST00000556078 DEF6Q9H4E7 631 aa4.41□□□□□ -1.7
EFCAB11-210ENST00000556078 BRMS1Q9HCU9 246 aa4.41□□□□□ -1.7
EFCAB11-210ENST00000556078 TFCP2L1Q9NZI6 479 aa4.41□□□□□ -1.7
EFCAB11-210ENST00000556078 THRAP3Q9Y2W1 955 aaKnown RBP4.41□□□□□ -1.7
EFCAB11-210ENST00000556078 TRIOBPQ9H2D6 2365 aa4.41□□□□□ -1.7
EFCAB11-210ENST00000556078 WDR33Q9C0J8 1336 aaKnown RBP4.41□□□□□ -1.7
EFCAB11-210ENST00000556078 CRB1P82279 1406 aa4.4□□□□□ -1.7
EFCAB11-210ENST00000556078 SPATA31E1Q6ZUB1 1445 aa4.4□□□□□ -1.7
EFCAB11-210ENST00000556078 H0Y8X5 98 aa4.4□□□□□ -1.71
EFCAB11-210ENST00000556078 TNFRSF10CO14798 259 aa4.4□□□□□ -1.71
EFCAB11-210ENST00000556078 SHOXO15266 292 aa4.4□□□□□ -1.71
EFCAB11-210ENST00000556078 CTSHP09668 335 aa4.4□□□□□ -1.71
EFCAB11-210ENST00000556078 ZNF326Q5BKZ1 582 aaKnown RBP4.4□□□□□ -1.71
EFCAB11-210ENST00000556078 MCTP2Q6DN12 878 aa4.4□□□□□ -1.71
EFCAB11-210ENST00000556078 ZNF585AQ6P3V2 769 aa4.4□□□□□ -1.71
EFCAB11-210ENST00000556078 SND1Q7KZF4 910 aaKnown RBP eCLIP4.4□□□□□ -1.71
EFCAB11-210ENST00000556078 PALM2Q8IXS6 379 aa4.4□□□□□ -1.71
EFCAB11-210ENST00000556078 WWC2-AS2Q96NR7 200 aa4.4□□□□□ -1.71
EFCAB11-210ENST00000556078 HIRIP3Q9BW71 556 aaPredicted RBP4.4□□□□□ -1.71
EFCAB11-210ENST00000556078 RXFP1Q9HBX9 757 aa4.4□□□□□ -1.71
EFCAB11-210ENST00000556078 KCNQ5Q9NR82 932 aa4.4□□□□□ -1.71
EFCAB11-210ENST00000556078 TCAF1Q9Y4C2 921 aa4.4□□□□□ -1.71
EFCAB11-210ENST00000556078 KDM2BQ8NHM5 1336 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms