RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	KLHL30	Q0D2K2	578 aa		13.41	□□□□□ -0.26
TMPO-212	ENST00000556029	MEA1	Q16626	185 aa		13.41	□□□□□ -0.26
TMPO-212	ENST00000556029	SEPT14	Q6ZU15	432 aa		13.41	□□□□□ -0.26
TMPO-212	ENST00000556029	B4GALNT4	Q76KP1	1039 aa		13.41	□□□□□ -0.26
TMPO-212	ENST00000556029	CCDC26	Q8TAB7	109 aa		13.41	□□□□□ -0.26
TMPO-212	ENST00000556029	ANKS1A	Q92625	1134 aa		13.41	□□□□□ -0.26
TMPO-212	ENST00000556029	CTTNBP2NL	Q9P2B4	639 aa		13.41	□□□□□ -0.26
TMPO-212	ENST00000556029	MTUS1	Q9ULD2	1270 aa		13.41	□□□□□ -0.26
TMPO-212	ENST00000556029	ARAP2	Q8WZ64	1704 aa		13.41	□□□□□ -0.26
TMPO-212	ENST00000556029	RCCD1	A6NED2	376 aa		13.41	□□□□□ -0.26
TMPO-212	ENST00000556029	RRP15	Q9Y3B9	282 aa	Known RBP	13.41	□□□□□ -0.26
TMPO-212	ENST00000556029	TARSL2	A2RTX5	802 aa	Known RBP	13.41	□□□□□ -0.26
TMPO-212	ENST00000556029	CCDC169	A6NNP5	214 aa		13.41	□□□□□ -0.26
TMPO-212	ENST00000556029	USP17L15	C9J2P7	530 aa		13.41	□□□□□ -0.26
TMPO-212	ENST00000556029	USP17L13	C9JLJ4	530 aa		13.41	□□□□□ -0.26
TMPO-212	ENST00000556029	USP17L11	C9JVI0	530 aa		13.41	□□□□□ -0.26
TMPO-212	ENST00000556029	USP17L18	D6R9N7	530 aa		13.41	□□□□□ -0.26
TMPO-212	ENST00000556029	USP17L22	D6RA61	530 aa		13.41	□□□□□ -0.26
TMPO-212	ENST00000556029	USP17L17	D6RBQ6	530 aa		13.41	□□□□□ -0.26
TMPO-212	ENST00000556029	USP17L19	D6RCP7	530 aa		13.41	□□□□□ -0.26
TMPO-212	ENST00000556029	USP17L20	D6RJB6	530 aa		13.41	□□□□□ -0.26
TMPO-212	ENST00000556029	USP17L24	Q0WX57	530 aa		13.41	□□□□□ -0.26
TMPO-212	ENST00000556029	CEP85L	Q5SZL2	805 aa		13.41	□□□□□ -0.26
TMPO-212	ENST00000556029	USP17L6P	Q6QN14	398 aa		13.41	□□□□□ -0.26
TMPO-212	ENST00000556029	COL23A1	Q86Y22	540 aa	Predicted RBP	13.41	□□□□□ -0.26
TMPO-212	ENST00000556029	COG1	Q8WTW3	980 aa		13.41	□□□□□ -0.26
TMPO-212	ENST00000556029	MKRN1	Q9UHC7	482 aa	Known RBP	13.41	□□□□□ -0.26
TMPO-212	ENST00000556029	HYOU1	Q9Y4L1	999 aa		13.41	□□□□□ -0.26
TMPO-212	ENST00000556029	BCL9L	Q86UU0	1499 aa		13.41	□□□□□ -0.26
TMPO-212	ENST00000556029	POTEM	A6NI47	508 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	FLOT1	O75955	427 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	IFNB1	P01574	187 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	CCT5	P48643	541 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	PPP2R5C	Q13362	524 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	UNC13D	Q70J99	1090 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	PPFIBP2	Q8ND30	876 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	CCDC17	Q96LX7	622 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	NOX5	Q96PH1	765 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	ERGIC2	Q96RQ1	377 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	TRIM7	Q9C029	511 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	DPH5	Q9H2P9	285 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	VIPAS39	Q9H9C1	493 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	KANSL2	Q9H9L4	492 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	STK17A	Q9UEE5	414 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	LRRC53	A6NM62	1247 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	TXNDC9	O14530	226 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	NEDD9	Q14511	834 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	ZNF365	Q70YC5	407 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	SP8	Q8IXZ3	490 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	RIN2	Q8WYP3	895 aa	Predicted RBP	13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	STMN2	Q93045	179 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	SEMA6B	Q9H3T3	888 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	POLL	Q9UGP5	575 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	HPCAL4	Q9UM19	191 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	MYO1C	O00159	1063 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	MEIS1	O00470	390 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	CETN3	O15182	167 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	GGCX	P38435	758 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	RASSF7	Q02833	373 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	TTBK2	Q6IQ55	1244 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	MYMK	A6NI61	221 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	TCP1	P17987	556 aa	Known RBP	13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	EZH2	Q15910	746 aa	Known RBP	13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	TRIM68	Q6AZZ1	485 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	PODN	Q7Z5L7	613 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	IFT20	Q8IY31	132 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	CCDC105	Q8IYK2	499 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	MYOCD	Q8IZQ8	938 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	NEDD1	Q8NHV4	660 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	DNM3	Q9UQ16	869 aa		13.4	□□□□□ -0.26
TMPO-212	ENST00000556029	PLCH1	Q4KWH8	1693 aa		13.39	□□□□□ -0.27
TMPO-212	ENST00000556029	BCOR	Q6W2J9	1755 aa		13.39	□□□□□ -0.27
TMPO-212	ENST00000556029		A0A1W2PQJ5	194 aa		13.39	□□□□□ -0.27
TMPO-212	ENST00000556029	USP17L10	C9JJH3	530 aa		13.39	□□□□□ -0.27
TMPO-212	ENST00000556029	NDC80	O14777	642 aa		13.39	□□□□□ -0.27
TMPO-212	ENST00000556029	ASPRV1	Q53RT3	343 aa		13.39	□□□□□ -0.27
TMPO-212	ENST00000556029	EAPP	Q56P03	285 aa	Predicted RBP	13.39	□□□□□ -0.27
TMPO-212	ENST00000556029	SPATA24	Q86W54	205 aa		13.39	□□□□□ -0.27
TMPO-212	ENST00000556029	GPBP1	Q86WP2	473 aa		13.39	□□□□□ -0.27
TMPO-212	ENST00000556029	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	13.39	□□□□□ -0.27
TMPO-212	ENST00000556029	FAM114A2	Q9NRY5	505 aa		13.39	□□□□□ -0.27
TMPO-212	ENST00000556029	SNX12	Q9UMY4	172 aa		13.39	□□□□□ -0.27
TMPO-212	ENST00000556029	KIAA1024	Q9UPX6	916 aa		13.39	□□□□□ -0.27
TMPO-212	ENST00000556029	TESPA1	A2RU30	521 aa	Predicted RBP	13.39	□□□□□ -0.27
TMPO-212	ENST00000556029		M0R2N6	131 aa		13.39	□□□□□ -0.27
TMPO-212	ENST00000556029	TDP2	O95551	362 aa		13.39	□□□□□ -0.27
TMPO-212	ENST00000556029	RPSA	P08865	295 aa	Known RBP	13.39	□□□□□ -0.27
TMPO-212	ENST00000556029	CLTA	P09496	248 aa		13.39	□□□□□ -0.27
TMPO-212	ENST00000556029	KRT15	P19012	456 aa		13.39	□□□□□ -0.27
TMPO-212	ENST00000556029	IFNAR2	P48551	515 aa		13.39	□□□□□ -0.27
TMPO-212	ENST00000556029	SLC7A5	Q01650	507 aa		13.39	□□□□□ -0.27
TMPO-212	ENST00000556029	GRIK5	Q16478	980 aa		13.39	□□□□□ -0.27
TMPO-212	ENST00000556029	SLC35G1	Q2M3R5	365 aa		13.39	□□□□□ -0.27
TMPO-212	ENST00000556029	GPATCH4	Q5T3I0	446 aa	Known RBP	13.39	□□□□□ -0.27
TMPO-212	ENST00000556029	CCNI2	Q6ZMN8	369 aa	Predicted RBP	13.39	□□□□□ -0.27
TMPO-212	ENST00000556029	KIAA0895	Q8NCT3	520 aa		13.39	□□□□□ -0.27
TMPO-212	ENST00000556029	CHURC1	Q8WUH1	139 aa		13.39	□□□□□ -0.27
TMPO-212	ENST00000556029	AMN	Q9BXJ7	453 aa		13.39	□□□□□ -0.27
TMPO-212	ENST00000556029	STMN4	Q9H169	189 aa	Predicted RBP	13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms