RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 LYPLA2O95372 231 aa13.98□□□□□ -0.17
SHMT2-221ENST00000555773 PGK1P00558 417 aa13.98□□□□□ -0.17
SHMT2-221ENST00000555773 GJB1P08034 283 aa13.98□□□□□ -0.17
SHMT2-221ENST00000555773 SPATA31C1P0DKV0 1188 aa13.98□□□□□ -0.17
SHMT2-221ENST00000555773 XRCC6P12956 609 aaKnown RBP eCLIP13.98□□□□□ -0.17
SHMT2-221ENST00000555773 CDC25AP30304 524 aa13.98□□□□□ -0.17
SHMT2-221ENST00000555773 CCT6AP40227 531 aaKnown RBP13.98□□□□□ -0.17
SHMT2-221ENST00000555773 UBE2HP62256 183 aa13.98□□□□□ -0.17
SHMT2-221ENST00000555773 HYIQ5T013 277 aa13.98□□□□□ -0.17
SHMT2-221ENST00000555773 CABP7Q86V35 215 aa13.98□□□□□ -0.17
SHMT2-221ENST00000555773 CATSPER3Q86XQ3 398 aa13.98□□□□□ -0.17
SHMT2-221ENST00000555773 SYMPKQ92797 1274 aaKnown RBP13.98□□□□□ -0.17
SHMT2-221ENST00000555773 LENG1Q96BZ8 264 aaPredicted RBP13.98□□□□□ -0.17
SHMT2-221ENST00000555773 EPSTI1Q96J88 318 aa13.98□□□□□ -0.17
SHMT2-221ENST00000555773 DEFB118Q96PH6 123 aa13.98□□□□□ -0.17
SHMT2-221ENST00000555773 PYM1Q9BRP8 204 aaKnown RBP13.98□□□□□ -0.17
SHMT2-221ENST00000555773 TSEN34Q9BSV6 310 aaKnown RBP13.98□□□□□ -0.17
SHMT2-221ENST00000555773 MMTAG2Q9BU76 263 aaKnown RBP13.98□□□□□ -0.17
SHMT2-221ENST00000555773 NT5C3AQ9H0P0 336 aa13.98□□□□□ -0.17
SHMT2-221ENST00000555773 ZNF302Q9NR11 478 aa13.98□□□□□ -0.17
SHMT2-221ENST00000555773 GABBR1Q9UBS5 961 aa13.98□□□□□ -0.17
SHMT2-221ENST00000555773 TELO2Q9Y4R8 837 aa13.98□□□□□ -0.17
SHMT2-221ENST00000555773 MCM3APO60318 1980 aa13.98□□□□□ -0.17
SHMT2-221ENST00000555773 EMSYQ7Z589 1322 aa13.97□□□□□ -0.17
SHMT2-221ENST00000555773 KDM3AQ9Y4C1 1321 aa13.97□□□□□ -0.17
SHMT2-221ENST00000555773 PP2D1A8MPX8 630 aa13.97□□□□□ -0.17
SHMT2-221ENST00000555773 PTGS1P23219 599 aa13.97□□□□□ -0.17
SHMT2-221ENST00000555773 MCM4P33991 863 aa13.97□□□□□ -0.17
SHMT2-221ENST00000555773 LRRC41Q15345 812 aa13.97□□□□□ -0.17
SHMT2-221ENST00000555773 SPECC1Q5M775 1068 aa13.97□□□□□ -0.17
SHMT2-221ENST00000555773 UTP14CQ5TAP6 766 aaKnown RBP13.97□□□□□ -0.17
SHMT2-221ENST00000555773 CCSAPQ6IQ19 270 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-221ENST00000555773 USP49Q70CQ1 688 aa13.97□□□□□ -0.17
SHMT2-221ENST00000555773 TPH2Q8IWU9 490 aa13.97□□□□□ -0.17
SHMT2-221ENST00000555773 C4orf19Q8IY42 314 aa13.97□□□□□ -0.17
SHMT2-221ENST00000555773 MRPS27Q92552 414 aaKnown RBP13.97□□□□□ -0.17
SHMT2-221ENST00000555773 GLG1Q92896 1179 aa13.97□□□□□ -0.17
SHMT2-221ENST00000555773 DYDC2Q96IM9 177 aa13.97□□□□□ -0.17
SHMT2-221ENST00000555773 CDK5RAP3Q96JB5 506 aa13.97□□□□□ -0.17
SHMT2-221ENST00000555773 NACC1Q96RE7 527 aa13.97□□□□□ -0.17
SHMT2-221ENST00000555773 PCYT2Q99447 389 aa13.97□□□□□ -0.17
SHMT2-221ENST00000555773 TMEM106CQ9BVX2 250 aa13.97□□□□□ -0.17
SHMT2-221ENST00000555773 NRBP2Q9NSY0 501 aa13.97□□□□□ -0.17
SHMT2-221ENST00000555773 RGL1Q9NZL6 768 aa13.97□□□□□ -0.17
SHMT2-221ENST00000555773 OGDHLQ9ULD0 1010 aa13.97□□□□□ -0.17
SHMT2-221ENST00000555773 MOXD2PA6NHM9 499 aa13.96□□□□□ -0.17
SHMT2-221ENST00000555773 MED24O75448 989 aa13.96□□□□□ -0.17
SHMT2-221ENST00000555773 CABYRO75952 493 aa13.96□□□□□ -0.17
SHMT2-221ENST00000555773 SGPL1O95470 568 aa13.96□□□□□ -0.17
SHMT2-221ENST00000555773 LGALS2P05162 132 aa13.96□□□□□ -0.17
SHMT2-221ENST00000555773 PTMSP20962 102 aa13.96□□□□□ -0.17
SHMT2-221ENST00000555773 BEX3Q00994 111 aa13.96□□□□□ -0.17
SHMT2-221ENST00000555773 CYP4A11Q02928 519 aa13.96□□□□□ -0.17
SHMT2-221ENST00000555773 CTTNQ14247 550 aaKnown RBP13.96□□□□□ -0.17
SHMT2-221ENST00000555773 KCNA10Q16322 511 aa13.96□□□□□ -0.17
SHMT2-221ENST00000555773 XKR3Q5GH77 459 aa13.96□□□□□ -0.17
SHMT2-221ENST00000555773 PDXDC2PQ6P474 469 aa13.96□□□□□ -0.17
SHMT2-221ENST00000555773 CCDC73Q6ZRK6 1079 aa13.96□□□□□ -0.17
SHMT2-221ENST00000555773 OTUD6AQ7L8S5 288 aa13.96□□□□□ -0.17
SHMT2-221ENST00000555773 CCDC60Q8IWA6 550 aaPredicted RBP13.96□□□□□ -0.17
SHMT2-221ENST00000555773 RASSF8Q8NHQ8 419 aa13.96□□□□□ -0.17
SHMT2-221ENST00000555773 FAM167AQ96KS9 214 aa13.96□□□□□ -0.17
SHMT2-221ENST00000555773 LXNQ9BS40 222 aa13.96□□□□□ -0.17
SHMT2-221ENST00000555773 C16orf70Q9BSU1 422 aa13.96□□□□□ -0.17
SHMT2-221ENST00000555773 CRISPLD2Q9H0B8 497 aa13.96□□□□□ -0.17
SHMT2-221ENST00000555773 LMBRD1Q9NUN5 540 aa13.96□□□□□ -0.17
SHMT2-221ENST00000555773 ERAP1Q9NZ08 941 aa13.96□□□□□ -0.17
SHMT2-221ENST00000555773 ZNF215Q9UL58 517 aaPredicted RBP13.96□□□□□ -0.17
SHMT2-221ENST00000555773 KCNH3Q9ULD8 1083 aa13.96□□□□□ -0.17
SHMT2-221ENST00000555773 DNM3Q9UQ16 869 aa13.96□□□□□ -0.17
SHMT2-221ENST00000555773 HPSEQ9Y251 543 aa13.96□□□□□ -0.17
SHMT2-221ENST00000555773 LRRC37A2A6NM11 1700 aa13.95□□□□□ -0.18
SHMT2-221ENST00000555773 DDX11L8A8MPP1 907 aa13.95□□□□□ -0.18
SHMT2-221ENST00000555773 H3BRB1 525 aa13.95□□□□□ -0.18
SHMT2-221ENST00000555773 GADD45BO75293 160 aaPredicted RBP13.95□□□□□ -0.18
SHMT2-221ENST00000555773 MYCP01106 439 aaPredicted RBP13.95□□□□□ -0.18
SHMT2-221ENST00000555773 TFRCP02786 760 aaKnown RBP13.95□□□□□ -0.18
SHMT2-221ENST00000555773 MYL3P08590 195 aa13.95□□□□□ -0.18
SHMT2-221ENST00000555773 GJA8P48165 433 aa13.95□□□□□ -0.18
SHMT2-221ENST00000555773 PURAQ00577 322 aaKnown RBP13.95□□□□□ -0.18
SHMT2-221ENST00000555773 GRB10Q13322 594 aa13.95□□□□□ -0.18
SHMT2-221ENST00000555773 TMEM119Q4V9L6 283 aa13.95□□□□□ -0.18
SHMT2-221ENST00000555773 RRAGBQ5VZM2 374 aa13.95□□□□□ -0.18
SHMT2-221ENST00000555773 FSIP1Q8NA03 581 aa13.95□□□□□ -0.18
SHMT2-221ENST00000555773 IQUBQ8NA54 791 aa13.95□□□□□ -0.18
SHMT2-221ENST00000555773 BANK1Q8NDB2 785 aa13.95□□□□□ -0.18
SHMT2-221ENST00000555773 U2AF1L4Q8WU68 220 aaKnown RBP13.95□□□□□ -0.18
SHMT2-221ENST00000555773 PNMA5Q96PV4 448 aa13.95□□□□□ -0.18
SHMT2-221ENST00000555773 MTG1Q9BT17 334 aaPredicted RBP13.95□□□□□ -0.18
SHMT2-221ENST00000555773 KATNAL1Q9BW62 490 aa13.95□□□□□ -0.18
SHMT2-221ENST00000555773 TUT1Q9H6E5 874 aaKnown RBP13.95□□□□□ -0.18
SHMT2-221ENST00000555773 USP25Q9UHP3 1055 aa13.95□□□□□ -0.18
SHMT2-221ENST00000555773 KIAA1024Q9UPX6 916 aa13.95□□□□□ -0.18
SHMT2-221ENST00000555773 KIAA1217Q5T5P2 1943 aa13.95□□□□□ -0.18
SHMT2-221ENST00000555773 HTTP42858 3142 aa13.95□□□□□ -0.18
SHMT2-221ENST00000555773 IGSF9BQ9UPX0 1349 aa13.94□□□□□ -0.18
SHMT2-221ENST00000555773 A0A1B0GVL5 298 aa13.94□□□□□ -0.18
SHMT2-221ENST00000555773 POTEB3A0JP26 581 aa13.94□□□□□ -0.18
SHMT2-221ENST00000555773 MYADML2A6NDP7 307 aa13.94□□□□□ -0.18
SHMT2-221ENST00000555773 KBTBD13C9JR72 458 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms