RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 ABHD15Q6UXT9 468 aa23.27■■□□□ 1.32
VTI1B-205ENST00000555543 OXER1Q8TDS5 423 aa23.27■■□□□ 1.32
VTI1B-205ENST00000555543 PBX4Q9BYU1 374 aa23.27■■□□□ 1.32
VTI1B-205ENST00000555543 AZI2Q9H6S1 392 aa23.27■■□□□ 1.32
VTI1B-205ENST00000555543 MSH4O15457 936 aa23.26■■□□□ 1.31
VTI1B-205ENST00000555543 TDP2O95551 362 aa23.26■■□□□ 1.31
VTI1B-205ENST00000555543 PLCB4Q15147 1175 aa23.26■■□□□ 1.31
VTI1B-205ENST00000555543 MARCH8Q5T0T0 291 aa23.26■■□□□ 1.31
VTI1B-205ENST00000555543 RUFY4Q6ZNE9 571 aa23.26■■□□□ 1.31
VTI1B-205ENST00000555543 PLPPR4Q7Z2D5 763 aa23.26■■□□□ 1.31
VTI1B-205ENST00000555543 CCDC60Q8IWA6 550 aaPredicted RBP23.26■■□□□ 1.31
VTI1B-205ENST00000555543 ZBTB10Q96DT7 871 aa23.26■■□□□ 1.31
VTI1B-205ENST00000555543 GUCD1Q96NT3 240 aa23.26■■□□□ 1.31
VTI1B-205ENST00000555543 TBC1D22BQ9NU19 505 aa23.26■■□□□ 1.31
VTI1B-205ENST00000555543 SLC4A7Q9Y6M7 1214 aa23.26■■□□□ 1.31
VTI1B-205ENST00000555543 GBF1Q92538 1859 aa23.26■■□□□ 1.31
VTI1B-205ENST00000555543 CTSHP09668 335 aa23.25■■□□□ 1.31
VTI1B-205ENST00000555543 STAT5BP51692 787 aa23.25■■□□□ 1.31
VTI1B-205ENST00000555543 NONOQ15233 471 aaKnown RBP eCLIP23.25■■□□□ 1.31
VTI1B-205ENST00000555543 INF2Q27J81 1249 aa23.25■■□□□ 1.31
VTI1B-205ENST00000555543 GJA10Q969M2 543 aa23.25■■□□□ 1.31
VTI1B-205ENST00000555543 OSBPL7Q9BZF2 842 aa23.25■■□□□ 1.31
VTI1B-205ENST00000555543 LIMCH1Q9UPQ0 1083 aa23.25■■□□□ 1.31
VTI1B-205ENST00000555543 MBLAC1A4D2B0 266 aaPredicted RBP23.24■■□□□ 1.31
VTI1B-205ENST00000555543 RSPH10B2B2RC85 870 aa23.24■■□□□ 1.31
VTI1B-205ENST00000555543 PARNO95453 639 aaKnown RBP23.24■■□□□ 1.31
VTI1B-205ENST00000555543 RSPH10BP0C881 870 aa23.24■■□□□ 1.31
VTI1B-205ENST00000555543 ACTN1P12814 892 aa23.24■■□□□ 1.31
VTI1B-205ENST00000555543 INSRRP14616 1297 aa23.24■■□□□ 1.31
VTI1B-205ENST00000555543 XBP1P17861 261 aa23.24■■□□□ 1.31
VTI1B-205ENST00000555543 IGBP1P78318 339 aa23.24■■□□□ 1.31
VTI1B-205ENST00000555543 KRT25Q7Z3Z0 450 aa23.24■■□□□ 1.31
VTI1B-205ENST00000555543 WASF1Q92558 559 aa23.24■■□□□ 1.31
VTI1B-205ENST00000555543 SEMA6BQ9H3T3 888 aa23.24■■□□□ 1.31
VTI1B-205ENST00000555543 TUBE1Q9UJT0 475 aa23.24■■□□□ 1.31
VTI1B-205ENST00000555543 TRPC6Q9Y210 931 aa23.24■■□□□ 1.31
VTI1B-205ENST00000555543 KAT6AQ92794 2004 aa23.23■■□□□ 1.31
VTI1B-205ENST00000555543 CHD7Q9P2D1 2997 aa23.23■■□□□ 1.31
VTI1B-205ENST00000555543 CYP3A7-CYP3A51PA0A087WV96 503 aa23.23■■□□□ 1.31
VTI1B-205ENST00000555543 BACH1O14867 736 aa23.23■■□□□ 1.31
VTI1B-205ENST00000555543 CYP3A7P24462 503 aa23.23■■□□□ 1.31
VTI1B-205ENST00000555543 FOSBP53539 338 aa23.23■■□□□ 1.31
VTI1B-205ENST00000555543 RABGGTBP53611 331 aa23.23■■□□□ 1.31
VTI1B-205ENST00000555543 Q4G0T1 1027 aa23.23■■□□□ 1.31
VTI1B-205ENST00000555543 ZNF746Q6NUN9 644 aaPredicted RBP23.23■■□□□ 1.31
VTI1B-205ENST00000555543 TRAPPC12Q8WVT3 735 aa23.23■■□□□ 1.31
VTI1B-205ENST00000555543 TIFAQ96CG3 184 aa23.23■■□□□ 1.31
VTI1B-205ENST00000555543 MBOAT7Q96N66 472 aa23.23■■□□□ 1.31
VTI1B-205ENST00000555543 YBX2Q9Y2T7 364 aaKnown RBP23.23■■□□□ 1.31
VTI1B-205ENST00000555543 PTPRSQ13332 1948 aa23.22■■□□□ 1.31
VTI1B-205ENST00000555543 CAND2O75155 1236 aa23.22■■□□□ 1.31
VTI1B-205ENST00000555543 ATP2A2P16615 1042 aaKnown RBP23.22■■□□□ 1.31
VTI1B-205ENST00000555543 KRT76Q01546 638 aa23.22■■□□□ 1.31
VTI1B-205ENST00000555543 EARS2Q5JPH6 523 aaKnown RBP23.22■■□□□ 1.31
VTI1B-205ENST00000555543 SWSAP1Q6NVH7 229 aa23.22■■□□□ 1.31
VTI1B-205ENST00000555543 MIS18BP1Q6P0N0 1132 aa23.22■■□□□ 1.31
VTI1B-205ENST00000555543 CNKSR3Q6P9H4 555 aa23.22■■□□□ 1.31
VTI1B-205ENST00000555543 CCDC83Q8IWF9 413 aa23.22■■□□□ 1.31
VTI1B-205ENST00000555543 SLC5A5Q92911 643 aa23.22■■□□□ 1.31
VTI1B-205ENST00000555543 ZNF302Q9NR11 478 aa23.22■■□□□ 1.31
VTI1B-205ENST00000555543 GTF3C3Q9Y5Q9 886 aa23.22■■□□□ 1.31
VTI1B-205ENST00000555543 SIP14410 1827 aa23.22■■□□□ 1.31
VTI1B-205ENST00000555543 TMEM265A0A087WTH1 108 aa23.21■■□□□ 1.31
VTI1B-205ENST00000555543 CCDC194A0A1B0GVG4 234 aa23.21■■□□□ 1.31
VTI1B-205ENST00000555543 POTEB3A0JP26 581 aa23.21■■□□□ 1.31
VTI1B-205ENST00000555543 FAM205CA6NFA0 338 aa23.21■■□□□ 1.31
VTI1B-205ENST00000555543 SLC37A4O43826 429 aa23.21■■□□□ 1.31
VTI1B-205ENST00000555543 BAIAP3O94812 1187 aa23.21■■□□□ 1.31
VTI1B-205ENST00000555543 ATP4AP20648 1035 aa23.21■■□□□ 1.31
VTI1B-205ENST00000555543 NR5A1Q13285 461 aa23.21■■□□□ 1.31
VTI1B-205ENST00000555543 FAM160B1Q5W0V3 765 aa23.21■■□□□ 1.31
VTI1B-205ENST00000555543 TAF2Q6P1X5 1199 aa23.21■■□□□ 1.31
VTI1B-205ENST00000555543 POTEBQ6S5H4 581 aa23.21■■□□□ 1.31
VTI1B-205ENST00000555543 MOXD1Q6UVY6 613 aa23.21■■□□□ 1.31
VTI1B-205ENST00000555543 PIK3AP1Q6ZUJ8 805 aa23.21■■□□□ 1.31
VTI1B-205ENST00000555543 SMAP1Q8IYB5 467 aaPredicted RBP23.21■■□□□ 1.31
VTI1B-205ENST00000555543 TNFRSF25Q93038 417 aa23.21■■□□□ 1.31
VTI1B-205ENST00000555543 RRN3P2A6NIE6 340 aa23.2■■□□□ 1.3
VTI1B-205ENST00000555543 MYOGP15173 224 aa23.2■■□□□ 1.3
VTI1B-205ENST00000555543 SLC26A2P50443 739 aa23.2■■□□□ 1.3
VTI1B-205ENST00000555543 WDR5P61964 334 aaKnown RBP23.2■■□□□ 1.3
VTI1B-205ENST00000555543 LETM2Q2VYF4 491 aa23.2■■□□□ 1.3
VTI1B-205ENST00000555543 LRCH2Q5VUJ6 765 aa23.2■■□□□ 1.3
VTI1B-205ENST00000555543 PDXDC2PQ6P474 469 aa23.2■■□□□ 1.3
VTI1B-205ENST00000555543 RPAINQ86UA6 219 aa23.2■■□□□ 1.3
VTI1B-205ENST00000555543 ETNPPLQ8TBG4 499 aa23.2■■□□□ 1.3
VTI1B-205ENST00000555543 ATP8B4Q8TF62 1192 aa23.2■■□□□ 1.3
VTI1B-205ENST00000555543 RIT2Q99578 217 aa23.2■■□□□ 1.3
VTI1B-205ENST00000555543 UNC45AQ9H3U1 944 aa23.2■■□□□ 1.3
VTI1B-205ENST00000555543 CHMP2AO43633 222 aa23.19■■□□□ 1.3
VTI1B-205ENST00000555543 GAS7O60861 476 aa23.19■■□□□ 1.3
VTI1B-205ENST00000555543 PSMD10O75832 226 aa23.19■■□□□ 1.3
VTI1B-205ENST00000555543 KRT2P35908 639 aa23.19■■□□□ 1.3
VTI1B-205ENST00000555543 RAB30Q15771 203 aa23.19■■□□□ 1.3
VTI1B-205ENST00000555543 FAM26DQ5JW98 314 aa23.19■■□□□ 1.3
VTI1B-205ENST00000555543 NEK8Q86SG6 692 aa23.19■■□□□ 1.3
VTI1B-205ENST00000555543 DBF4BQ8NFT6 615 aa23.19■■□□□ 1.3
VTI1B-205ENST00000555543 DNAJB3Q8WWF6 145 aa23.19■■□□□ 1.3
VTI1B-205ENST00000555543 SLC9A7Q96T83 725 aa23.19■■□□□ 1.3
VTI1B-205ENST00000555543 CDX2Q99626 313 aaPredicted RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms