RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 INHBCP55103 352 aa6.07□□□□□ -1.44
SNX6-204ENST00000555541 LSM12Q3MHD2 195 aaKnown RBP6.07□□□□□ -1.44
SNX6-204ENST00000555541 GPR155Q7Z3F1 870 aa6.07□□□□□ -1.44
SNX6-204ENST00000555541 CACTINQ8WUQ7 758 aaKnown RBP6.07□□□□□ -1.44
SNX6-204ENST00000555541 DCAF4Q8WV16 495 aa6.07□□□□□ -1.44
SNX6-204ENST00000555541 SGSM3Q96HU1 749 aa6.07□□□□□ -1.44
SNX6-204ENST00000555541 LMF1Q96S06 567 aa6.07□□□□□ -1.44
SNX6-204ENST00000555541 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.07□□□□□ -1.441e-6■■■■□ 19.5
SNX6-204ENST00000555541 ST7Q9NRC1 585 aa6.07□□□□□ -1.44
SNX6-204ENST00000555541 ASXL2Q76L83 1435 aa6.07□□□□□ -1.44
SNX6-204ENST00000555541 A0A087X1B8 175 aa6.06□□□□□ -1.44
SNX6-204ENST00000555541 KLF4O43474 513 aa6.06□□□□□ -1.44
SNX6-204ENST00000555541 ZNF888P0CJ79 500 aaPredicted RBP6.06□□□□□ -1.44
SNX6-204ENST00000555541 FGFR1P11362 822 aa6.06□□□□□ -1.44
SNX6-204ENST00000555541 GRK2P25098 689 aa6.06□□□□□ -1.44
SNX6-204ENST00000555541 ERCC5P28715 1186 aaPredicted RBP6.06□□□□□ -1.44
SNX6-204ENST00000555541 GRK3P35626 688 aa6.06□□□□□ -1.44
SNX6-204ENST00000555541 RALYLQ86SE5 291 aaKnown RBP6.06□□□□□ -1.44
SNX6-204ENST00000555541 FUKQ8N0W3 1084 aa6.06□□□□□ -1.44
SNX6-204ENST00000555541 HNRNPLLQ8WVV9 542 aaKnown RBP6.06□□□□□ -1.44
SNX6-204ENST00000555541 ARHGAP20Q9P2F6 1191 aa6.06□□□□□ -1.44
SNX6-204ENST00000555541 BLACEA4D250 179 aa6.05□□□□□ -1.44
SNX6-204ENST00000555541 U2SURPO15042 1029 aaKnown RBP6.05□□□□□ -1.44
SNX6-204ENST00000555541 C1SP09871 688 aa6.05□□□□□ -1.44
SNX6-204ENST00000555541 COMTP21964 271 aa6.05□□□□□ -1.44
SNX6-204ENST00000555541 HSP90AA2PQ14568 343 aaPredicted RBP6.05□□□□□ -1.44
SNX6-204ENST00000555541 KIZQ2M2Z5 673 aa6.05□□□□□ -1.44
SNX6-204ENST00000555541 STYK1Q6J9G0 422 aa6.05□□□□□ -1.44
SNX6-204ENST00000555541 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.05□□□□□ -1.44
SNX6-204ENST00000555541 TAX1BP1Q86VP1 789 aa6.05□□□□□ -1.44
SNX6-204ENST00000555541 REXO1L1PQ8IX06 675 aa6.05□□□□□ -1.44
SNX6-204ENST00000555541 IL17DQ8TAD2 202 aa6.05□□□□□ -1.44
SNX6-204ENST00000555541 AGAP2Q99490 1192 aa6.05□□□□□ -1.44
SNX6-204ENST00000555541 KCNJ15Q99712 375 aa6.05□□□□□ -1.44
SNX6-204ENST00000555541 ZFYVE21Q9BQ24 234 aa6.05□□□□□ -1.44
SNX6-204ENST00000555541 DSEQ9UL01 958 aa6.05□□□□□ -1.44
SNX6-204ENST00000555541 AGRPO00253 132 aa6.04□□□□□ -1.44
SNX6-204ENST00000555541 PRODHO43272 600 aa6.04□□□□□ -1.44
SNX6-204ENST00000555541 SOD2P04179 222 aa6.04□□□□□ -1.44
SNX6-204ENST00000555541 PABPC1P11940 636 aaKnown RBP6.04□□□□□ -1.44
SNX6-204ENST00000555541 GPR85P60893 370 aa6.04□□□□□ -1.44
SNX6-204ENST00000555541 DDR2Q16832 855 aa6.04□□□□□ -1.44
SNX6-204ENST00000555541 LRCH2Q5VUJ6 765 aa6.04□□□□□ -1.44
SNX6-204ENST00000555541 YOD1Q5VVQ6 348 aaPredicted RBP6.04□□□□□ -1.44
SNX6-204ENST00000555541 KCTD1Q719H9 257 aa6.04□□□□□ -1.44
SNX6-204ENST00000555541 DNAJC10Q8IXB1 793 aa6.04□□□□□ -1.44
SNX6-204ENST00000555541 NEIL1Q96FI4 390 aaPredicted RBP6.04□□□□□ -1.44
SNX6-204ENST00000555541 LRRC37BQ96QE4 947 aa6.04□□□□□ -1.44
SNX6-204ENST00000555541 TACO1Q9BSH4 297 aaKnown RBP6.04□□□□□ -1.44
SNX6-204ENST00000555541 AARSD1Q9BTE6 412 aaKnown RBP6.04□□□□□ -1.44
SNX6-204ENST00000555541 IPPKQ9H8X2 491 aa6.04□□□□□ -1.44
SNX6-204ENST00000555541 FBXO21O94952 628 aa6.03□□□□□ -1.44
SNX6-204ENST00000555541 GNAT1P11488 350 aa6.03□□□□□ -1.44
SNX6-204ENST00000555541 SPIRE1Q08AE8 756 aa6.03□□□□□ -1.44
SNX6-204ENST00000555541 DUSP8Q13202 625 aa6.03□□□□□ -1.44
SNX6-204ENST00000555541 TOP3AQ13472 1001 aaPredicted RBP6.03□□□□□ -1.44
SNX6-204ENST00000555541 MAMDC4Q6UXC1 1216 aa6.03□□□□□ -1.44
SNX6-204ENST00000555541 VOPP1Q96AW1 172 aa6.03□□□□□ -1.44
SNX6-204ENST00000555541 CSRNP2Q9H175 543 aa6.03□□□□□ -1.44
SNX6-204ENST00000555541 FAM90A27PA6NNH2 459 aa6.02□□□□□ -1.45
SNX6-204ENST00000555541 H0Y858 1186 aa6.02□□□□□ -1.45
SNX6-204ENST00000555541 MATN2O00339 956 aa6.02□□□□□ -1.45
SNX6-204ENST00000555541 RAD17O75943 681 aa6.02□□□□□ -1.45
SNX6-204ENST00000555541 POLD1P28340 1107 aa6.02□□□□□ -1.45
SNX6-204ENST00000555541 DBPQ10586 325 aaPredicted RBP6.02□□□□□ -1.45
SNX6-204ENST00000555541 USP10Q14694 798 aaKnown RBP6.02□□□□□ -1.45
SNX6-204ENST00000555541 RNF151Q2KHN1 245 aa6.02□□□□□ -1.45
SNX6-204ENST00000555541 NSMFQ6X4W1 530 aa6.02□□□□□ -1.45
SNX6-204ENST00000555541 Q6ZPA2 131 aa6.02□□□□□ -1.45
SNX6-204ENST00000555541 ANKS3Q6ZW76 656 aa6.02□□□□□ -1.45
SNX6-204ENST00000555541 IFNL3Q8IZI9 196 aa6.02□□□□□ -1.45
SNX6-204ENST00000555541 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.02□□□□□ -1.45
SNX6-204ENST00000555541 NEU4Q8WWR8 484 aaPredicted RBP6.02□□□□□ -1.45
SNX6-204ENST00000555541 LARP4BQ92615 738 aaKnown RBP6.02□□□□□ -1.45
SNX6-204ENST00000555541 GMLQ99445 158 aa6.02□□□□□ -1.45
SNX6-204ENST00000555541 CD244Q9BZW8 370 aa6.02□□□□□ -1.45
SNX6-204ENST00000555541 SLC39A2Q9NP94 309 aa6.02□□□□□ -1.45
SNX6-204ENST00000555541 SLC30A1Q9Y6M5 507 aa6.02□□□□□ -1.45
SNX6-204ENST00000555541 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.01□□□□□ -1.45
SNX6-204ENST00000555541 ACO1P21399 889 aaKnown RBP6.01□□□□□ -1.45
SNX6-204ENST00000555541 COL10A1Q03692 680 aa6.01□□□□□ -1.45
SNX6-204ENST00000555541 ARID5AQ03989 594 aa6.01□□□□□ -1.45
SNX6-204ENST00000555541 NOLC1Q14978 699 aaKnown RBP eCLIP6.01□□□□□ -1.45
SNX6-204ENST00000555541 GIMAP8Q8ND71 665 aaPredicted RBP6.01□□□□□ -1.45
SNX6-204ENST00000555541 CARD11Q9BXL7 1154 aa6.01□□□□□ -1.45
SNX6-204ENST00000555541 FAM47E-STBD1D6RA91 191 aa6□□□□□ -1.45
SNX6-204ENST00000555541 WNT9AO14904 365 aa6□□□□□ -1.45
SNX6-204ENST00000555541 AMY2AP04746 511 aa6□□□□□ -1.45
SNX6-204ENST00000555541 AMY2BP19961 511 aa6□□□□□ -1.45
SNX6-204ENST00000555541 TBR1Q16650 682 aa6□□□□□ -1.45
SNX6-204ENST00000555541 ZNF627Q7L945 461 aa6□□□□□ -1.45
SNX6-204ENST00000555541 NUB1Q9Y5A7 615 aa6□□□□□ -1.45
SNX6-204ENST00000555541 KRT4P19013 534 aa5.99□□□□□ -1.45
SNX6-204ENST00000555541 C1orf210Q8IVY1 113 aa5.99□□□□□ -1.45
SNX6-204ENST00000555541 SCUBE1Q8IWY4 988 aa5.99□□□□□ -1.45
SNX6-204ENST00000555541 SLC43A3Q8NBI5 491 aa5.99□□□□□ -1.45
SNX6-204ENST00000555541 ST13P5Q8NFI4 369 aaPredicted RBP5.99□□□□□ -1.45
SNX6-204ENST00000555541 TRAF6Q9Y4K3 522 aa5.99□□□□□ -1.45
SNX6-204ENST00000555541 DMRT1Q9Y5R6 373 aa5.99□□□□□ -1.45
SNX6-204ENST00000555541 ESYT3A0FGR9 886 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms